[Blends-commit] [Git][blends-team/med][master] Do not advertise Python2 version any more if Python3 version exists

Andreas Tille gitlab at salsa.debian.org
Sat Aug 25 22:29:57 BST 2018


Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
61a0b0b4 by Andreas Tille at 2018-08-25T21:29:27Z
Do not advertise Python2 version any more if Python3 version exists

- - - - -


1 changed file:

- tasks/bio-dev


Changes:

=====================================
tasks/bio-dev
=====================================
@@ -226,46 +226,39 @@ Pkg-Description: platform for chemo- and bioinformatics based on Eclipse
 
 Recommends: libgff-dev
 
-Recommends: python-pysam
+Recommends: python3-pysam
 
 Recommends: python-pbcore, python-pbh5tools
 
-Recommends: python-cobra
+Recommends: python3-cobra
 
 Recommends: libtabixpp-dev
 
-Recommends: python3-ruffus | python-ruffus
+Recommends: python3-ruffus
 
-Recommends: python3-hyphy | python-hyphy
+Recommends: python3-hyphy
 
-Recommends: python3-dendropy | python-dendropy
+Recommends: python3-dendropy
 
 Recommends: python3-skbio
 
-Recommends: python3-pbconsensuscore | python-pbconsensuscore
+Recommends: python3-pbconsensuscore
 
-Recommends: python3-consensuscore2 | python-consensuscore2, libconsensuscore-dev
+Recommends: python3-consensuscore2, libconsensuscore-dev
 
 Recommends: python-pbcommand
 
-Recommends: python3-pyvcf | python-pyvcf
+Recommends: python3-pyvcf
 
-Recommends: python3-pyfaidx | python-pyfaidx
+Recommends: python3-pyfaidx
 
 Recommends: python-kineticstools
 
-Recommends: python3-pyfasta | python-pyfasta
-Remark: Testsuite uncovers problems and code is not actively maintained
- The upstream author of python-pyfasta confirmed that he stopped
- the development and recommends python-pyfaidx instead.  So the
- packaging code for python-pyfasta in SVN works but there is no
- intend to really upload the package.
-
 Suggests: libbam-dev
 
 Recommends: libqes-dev
 
-Recommends: libfast5-dev, python3-fast5 | python-fast5
+Recommends: libfast5-dev, python3-fast5
 
 Recommends: libpbseq-dev, libpbdata-dev, libpbihdf-dev, libblasr-dev
 
@@ -275,7 +268,7 @@ Recommends: libminimap-dev
 
 Recommends: libncl-dev
 
-Recommends: libngs-sdk-dev, libngs-java, python3-ngs | python-ngs, libncbi-vdb-dev
+Recommends: libngs-sdk-dev, libngs-java, python3-ngs, libncbi-vdb-dev
 
 Recommends: libqcpp-dev
 
@@ -322,8 +315,7 @@ Recommends: python3-pybedtools
 
 Recommends: python3-gffutils
 
-Recommends: python3-bx | python-bx
-WNPP: 851242
+Recommends: python3-bx
 
 Recommends: python-bd2k, toil, galaxy-lib
 
@@ -333,11 +325,11 @@ Recommends: libseqlib-dev
 
 Recommends: libroadrunner-dev, python-roadrunner
 
-Recommends: python3-biotools | python-biotools
+Recommends: python3-biotools
 
 Recommends: bio-tradis
 
-Recommends: python3-biomaj3 | python-biomaj3
+Recommends: python3-biomaj3
 
 Suggests: python-pyflow
 
@@ -345,7 +337,7 @@ Suggests: r-cran-natserv
 
 Recommends: libbiod-dev
 
-Recommends: python3-ete3 | python-ete3
+Recommends: python3-ete3
 
 Recommends: python3-gfapy
 



View it on GitLab: https://salsa.debian.org/blends-team/med/commit/61a0b0b4061605f179e11d1c978ff5ef3f60a2ec

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View it on GitLab: https://salsa.debian.org/blends-team/med/commit/61a0b0b4061605f179e11d1c978ff5ef3f60a2ec
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