[Blends-commit] [Git][blends-team/med][master] Do not advertise Python2 version any more if Python3 version exists
Andreas Tille
gitlab at salsa.debian.org
Sat Aug 25 22:29:57 BST 2018
Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
61a0b0b4 by Andreas Tille at 2018-08-25T21:29:27Z
Do not advertise Python2 version any more if Python3 version exists
- - - - -
1 changed file:
- tasks/bio-dev
Changes:
=====================================
tasks/bio-dev
=====================================
@@ -226,46 +226,39 @@ Pkg-Description: platform for chemo- and bioinformatics based on Eclipse
Recommends: libgff-dev
-Recommends: python-pysam
+Recommends: python3-pysam
Recommends: python-pbcore, python-pbh5tools
-Recommends: python-cobra
+Recommends: python3-cobra
Recommends: libtabixpp-dev
-Recommends: python3-ruffus | python-ruffus
+Recommends: python3-ruffus
-Recommends: python3-hyphy | python-hyphy
+Recommends: python3-hyphy
-Recommends: python3-dendropy | python-dendropy
+Recommends: python3-dendropy
Recommends: python3-skbio
-Recommends: python3-pbconsensuscore | python-pbconsensuscore
+Recommends: python3-pbconsensuscore
-Recommends: python3-consensuscore2 | python-consensuscore2, libconsensuscore-dev
+Recommends: python3-consensuscore2, libconsensuscore-dev
Recommends: python-pbcommand
-Recommends: python3-pyvcf | python-pyvcf
+Recommends: python3-pyvcf
-Recommends: python3-pyfaidx | python-pyfaidx
+Recommends: python3-pyfaidx
Recommends: python-kineticstools
-Recommends: python3-pyfasta | python-pyfasta
-Remark: Testsuite uncovers problems and code is not actively maintained
- The upstream author of python-pyfasta confirmed that he stopped
- the development and recommends python-pyfaidx instead. So the
- packaging code for python-pyfasta in SVN works but there is no
- intend to really upload the package.
-
Suggests: libbam-dev
Recommends: libqes-dev
-Recommends: libfast5-dev, python3-fast5 | python-fast5
+Recommends: libfast5-dev, python3-fast5
Recommends: libpbseq-dev, libpbdata-dev, libpbihdf-dev, libblasr-dev
@@ -275,7 +268,7 @@ Recommends: libminimap-dev
Recommends: libncl-dev
-Recommends: libngs-sdk-dev, libngs-java, python3-ngs | python-ngs, libncbi-vdb-dev
+Recommends: libngs-sdk-dev, libngs-java, python3-ngs, libncbi-vdb-dev
Recommends: libqcpp-dev
@@ -322,8 +315,7 @@ Recommends: python3-pybedtools
Recommends: python3-gffutils
-Recommends: python3-bx | python-bx
-WNPP: 851242
+Recommends: python3-bx
Recommends: python-bd2k, toil, galaxy-lib
@@ -333,11 +325,11 @@ Recommends: libseqlib-dev
Recommends: libroadrunner-dev, python-roadrunner
-Recommends: python3-biotools | python-biotools
+Recommends: python3-biotools
Recommends: bio-tradis
-Recommends: python3-biomaj3 | python-biomaj3
+Recommends: python3-biomaj3
Suggests: python-pyflow
@@ -345,7 +337,7 @@ Suggests: r-cran-natserv
Recommends: libbiod-dev
-Recommends: python3-ete3 | python-ete3
+Recommends: python3-ete3
Recommends: python3-gfapy
View it on GitLab: https://salsa.debian.org/blends-team/med/commit/61a0b0b4061605f179e11d1c978ff5ef3f60a2ec
--
View it on GitLab: https://salsa.debian.org/blends-team/med/commit/61a0b0b4061605f179e11d1c978ff5ef3f60a2ec
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