[Blends-commit] [Git][blends-team/med][master] Remove extra information from caftools

Andreas Tille gitlab at salsa.debian.org
Tue Dec 18 15:57:56 GMT 2018


Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
215c63b0 by Andreas Tille at 2018-12-18T15:57:19Z
Remove extra information from caftools

- - - - -


1 changed file:

- tasks/bio


Changes:

=====================================
tasks/bio
=====================================
@@ -1812,28 +1812,6 @@ Recommends: r-cran-phytools
 Recommends: r-cran-treescape
 
 Recommends: caftools
-Homepage: http://www.sanger.ac.uk/Software/formats/CAF/userguide.shtml
-License: Free for non-commercial purposes
-Responsible: BioLinux - Bela Tiwari <btiwari at ceh.ac.uk>
-Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
-Pkg-Description: Tools to maintain DNA sequence assemblies
- This is V2 of the CAF (Common Assembly Format) C-tools.  It comprises
- a set of libraries and programs for manipulating DNA sequence
- assemblies using CAF files.
- .
- The CAF specification can be found at:
- http://www.sanger.ac.uk/Software/formats/CAF/
-Remark: The BioLinux distribution http://envgen.nox.ac.uk/biolinux.html
- maintains a package called bio-linux-assembly-conversion-tools which
- contains caftools and roche2gap in one package with the following
- description:
- .
- Conversion tools for handling 454 assemblies.
- .
- This package contains code from different authors that allow sequence
- assemblies to be converted into formats such as CAF (Common Assembly
- Format) or GAP4. This package includes tools to convert assemblies
- from Newbler's ace format for loading into a gap4 assembly.
 
 Recommends: roche454ace2caf
 Homepage: http://genome.imb-jena.de/software/roche454ace2caf/



View it on GitLab: https://salsa.debian.org/blends-team/med/commit/215c63b0af845f9df7ecb5888272651ef8b4ec80

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