[Blends-commit] [Git][blends-team/med][master] 4 commits: Re-render tasks with Buster release state
Andreas Tille
gitlab at salsa.debian.org
Wed Jun 12 15:40:59 BST 2019
Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
d556ba23 by Andreas Tille at 2019-06-12T14:26:52Z
Re-render tasks with Buster release state
- - - - -
69a055e0 by Andreas Tille at 2019-06-12T14:29:15Z
Regenerate dependency data
- - - - -
acabb27e by Andreas Tille at 2019-06-12T14:31:28Z
Update changelog about changes in tasks files
- - - - -
fc2f0d40 by Andreas Tille at 2019-06-12T14:32:37Z
Upload to unstable
- - - - -
4 changed files:
- debian-med-tasks.desc
- debian/changelog
- debian/control
- + dependency_data/debian-med_3.3.json
Changes:
=====================================
debian-med-tasks.desc
=====================================
@@ -162,15 +162,6 @@ Description: Debian Med packages for psychology
Key:
med-psychology
-Task: med-rehabilitation
-Parent: debian-med
-Section: debian-med
-Description: Debian Med packages for rehabilitation technologies
- This metapackage will install tools that are useful for
- rehabilitation and therapy.
-Key:
- med-rehabilitation
-
Task: med-research
Parent: debian-med
Section: debian-med
=====================================
debian/changelog
=====================================
@@ -1,6 +1,56 @@
-debian-med (3.3) UNRELEASED; urgency=medium
+debian-med (3.3) unstable; urgency=medium
- *
+ * Re-render tasks with Buster release state
+
+ * start of automatic changelog entry *
+
+ * Changes in metapackage dependencies
+ -med-bio
+ added:
+ Recommends: pilercr, mosdepth, quast, r-cran-webgestaltr, ragout,
+ kraken2, gffread, filtlong, umis, sailfish, sibelia,
+ atropos, braker, virulencefinder, vcfanno, biobambam2,
+ python3-pybel, kmerresistance, optitype, spaln, kma,
+ stringtie, oncofuse, optimir, kallisto, sina, dendroscope,
+ multiqc, python3-geneimpacts, bismark
+ Suggests: r-cran-forecast
+ removed:
+ Recommends: pybel
+ Suggests: melting-gui
+ -med-bio-dev
+ added:
+ Recommends: libbio-samtools-perl, libbio-asn1-entrezgene-perl,
+ libnexml-java, libbio-tools-run-alignment-clustalw-perl,
+ libbigwig-dev, libbio-tools-phylo-paml-perl,
+ libbio-chado-schema-perl, python3-cgecore, libbio-scf-perl,
+ python3-mirtop, libbio-tools-run-alignment-tcoffee-perl,
+ python3-pybel
+ Ignore: golang-github-biogo-hts-dev
+ -med-bio-ngs
+ added:
+ Recommends: kraken2, stringtie
+ -med-cms
+ added:
+ Recommends: xnat
+ removed:
+ Suggests: xnat
+ -med-imaging
+ added:
+ Recommends: xnat
+ removed:
+ Suggests: xnat
+ -med-imaging-dev
+ added:
+ Recommends: libvtk7-dev
+ Suggests: libvtk6-dev
+ removed:
+ Recommends: libvtk6-dev
+ -med-psychology
+ added:
+ Recommends: r-cran-psychometric, r-cran-psych, r-cran-psyphy,
+ r-cran-psychotree
+ removed:
+ Recommends: psychotree, psychometric, miscpsycho, psyphy, psych
-- Andreas Tille <tille at debian.org> Fri, 25 Jan 2019 14:49:50 +0100
=====================================
debian/control
=====================================
@@ -74,7 +74,6 @@ Suggests: med-cloud,
med-physics,
med-practice,
med-psychology,
- med-rehabilitation,
med-research,
med-tools,
med-typesetting
@@ -203,7 +202,6 @@ Recommends: abacas,
estscan,
examl,
exonerate,
- falcon,
fastahack,
fastaq,
fastdnaml,
@@ -255,13 +253,13 @@ Recommends: abacas,
hmmer2,
hyphy-mpi | hyphy-pt,
idba,
+ igor,
indelible,
infernal,
ipig,
iqtree,
iva,
jaligner,
- jalview,
jellyfish,
jellyfish1,
jmodeltest,
@@ -315,7 +313,6 @@ Recommends: abacas,
mothur,
mptp,
mrbayes,
- msxpertsuite,
mummer,
murasaki | murasaki-mpi,
muscle,
@@ -421,9 +418,10 @@ Recommends: abacas,
python3-gffutils,
python3-presto,
python3-pybedtools,
+ python3-pybel,
+ python3-sqt,
pyvcf,
qcumber,
- qiime,
qtltools,
quorum,
qutemol,
@@ -498,9 +496,9 @@ Recommends: abacas,
runcircos-gui,
saint,
salmon,
- sambamba,
samblaster,
samtools,
+ scoary,
scrm,
scythe,
seaview,
@@ -520,7 +518,6 @@ Recommends: abacas,
smalr,
smalt,
smithwaterman,
- smrtanalysis,
snap,
snap-aligner,
sniffles,
@@ -597,6 +594,7 @@ Suggests: acacia,
arachne,
arb,
asap,
+ atropos,
autodocktools,
axparafit,
axpcoords,
@@ -606,9 +604,12 @@ Suggests: acacia,
biceps,
big-blast,
bigsdb,
+ biobambam2,
+ bismark,
blat,
blimps-utils,
blobology,
+ braker,
btk-core,
cactus,
caftools,
@@ -633,6 +634,7 @@ Suggests: acacia,
dascrubber,
dazzle,
deepbinner,
+ dendroscope,
e-hive,
ecell,
embassy-phylip,
@@ -646,9 +648,11 @@ Suggests: acacia,
exabayes,
exalt,
excavator,
+ falcon,
fasta3,
ffp,
figaro,
+ filtlong,
forester,
forge,
galaxy,
@@ -661,6 +665,7 @@ Suggests: acacia,
genezilla,
genographer,
getdata,
+ gffread,
glimmerhmm,
gmap,
gmv,
@@ -669,12 +674,16 @@ Suggests: acacia,
hawkeye,
htqc,
igdiscover,
- igor,
igv,
inspect,
+ jalview,
jbrowse,
jigsaw,
+ kallisto,
kempbasu,
+ kma,
+ kmerresistance,
+ kraken2,
lofreq,
mach-haplotyper,
mage2tab,
@@ -684,7 +693,6 @@ Suggests: acacia,
martj,
maude,
maxd,
- melting-gui,
meme,
mesquite,
metabit,
@@ -705,10 +713,13 @@ Suggests: acacia,
modeller,
molekel,
mosaik-aligner,
+ mosdepth,
mpsqed,
mrs,
msatfinder,
+ msxpertsuite,
mugsy,
+ multiqc,
mummergpu,
mview,
nanocall,
@@ -721,7 +732,10 @@ Suggests: acacia,
obo-edit,
oligoarrayaux,
omegamap,
+ oncofuse,
operondb,
+ optimir,
+ optitype,
paipline,
partigene,
partitionfinder,
@@ -734,6 +748,7 @@ Suggests: acacia,
phylophlan,
phyloviz-core,
phylowin,
+ pilercr,
pipasic,
plato,
profit,
@@ -741,25 +756,29 @@ Suggests: acacia,
prot4est,
psipred,
pssh2,
- pybel,
pyrophosphate-tools,
python-orange,
python-reaper,
python-treetime,
- python3-sqt,
+ python3-geneimpacts,
+ qiime,
qtlcart,
qualimap,
+ quast,
r-bioc-annotationhub,
r-bioc-aroma.light,
r-bioc-ensembldb,
r-bioc-go.db,
r-bioc-savr,
r-cran-boolnet,
+ r-cran-forecast,
r-cran-pheatmap,
r-cran-qqman,
r-cran-rentrez,
+ r-cran-webgestaltr,
r-other-apmswapp,
raccoon,
+ ragout,
raxml-ng,
rbs-finder,
repeatmasker,
@@ -768,23 +787,29 @@ Suggests: acacia,
roche454ace2caf,
rose,
rsat,
+ sailfish,
+ sambamba,
sap,
science-workflow,
- scoary,
seq-gen,
seq-seq-pan,
sequenceconverter.app,
+ sibelia,
sift,
+ sina,
sistr,
situs,
+ smrtanalysis,
snpeff,
solvate,
sourmash,
+ spaln,
sparta,
splitstree,
ssaha,
strap,
strap-base,
+ stringtie,
tab2mage,
tacg,
taverna,
@@ -800,12 +825,15 @@ Suggests: acacia,
twain,
ugene,
umap,
+ umis,
unc-fish,
uniprime,
varmatch,
varscan,
+ vcfanno,
vdjtools,
vienna-rna,
+ virulencefinder,
vmd,
x-tandem-pipeline,
zodiac-zeden
@@ -828,6 +856,8 @@ Recommends: bio-tradis,
libai-fann-perl,
libbambamc-dev,
libbamtools-dev,
+ libbio-asn1-entrezgene-perl,
+ libbio-chado-schema-perl,
libbio-coordinate-perl,
libbio-das-lite-perl,
libbio-eutilities-perl,
@@ -835,8 +865,12 @@ Recommends: bio-tradis,
libbio-mage-perl,
libbio-mage-utils-perl,
libbio-primerdesigner-perl,
+ libbio-samtools-perl,
+ libbio-scf-perl,
+ libbio-tools-phylo-paml-perl,
+ libbio-tools-run-alignment-clustalw-perl,
+ libbio-tools-run-alignment-tcoffee-perl,
libbiococoa-dev,
- libbiod-dev,
libbiojava-java,
libbiojava4-java,
libbioparser-dev,
@@ -948,13 +982,14 @@ Recommends: bio-tradis,
python3-pbconsensuscore,
python3-presto,
python3-pybedtools,
+ python3-pybel,
python3-pyfaidx,
python3-pymummer,
python3-pysam,
python3-pyvcf,
python3-ruffus,
python3-screed,
- python3-skbio,
+ python3-sqt,
python3-treetime,
r-bioc-biobase,
r-cran-genetics,
@@ -972,6 +1007,8 @@ Suggests: bioclipse,
ctdconverter,
galaxy-lib,
libbam-dev,
+ libbigwig-dev,
+ libbiod-dev,
libdisorder-dev,
libforester-java,
libfreecontact-doc,
@@ -979,6 +1016,7 @@ Suggests: bioclipse,
libgtextutils-dev,
libmilib-java,
libmodhmm-dev,
+ libnexml-java,
libpbcopper-dev,
libqcpp-dev,
libroadrunner-dev,
@@ -996,13 +1034,15 @@ Suggests: bioclipse,
python-roadrunner,
python-screed,
python3-biopython-sql,
+ python3-cgecore,
python3-consensuscore2,
python3-ctdopts,
python3-ete3,
python3-hyphy,
+ python3-mirtop,
python3-misopy,
python3-seqcluster,
- python3-sqt,
+ python3-skbio,
r-bioc-affy,
r-bioc-affyio,
r-bioc-altcdfenvs,
@@ -1152,7 +1192,6 @@ Recommends: abyss,
python-cogent,
python3-biomaj3-cli,
python3-biopython,
- qiime,
r-bioc-hilbertvis,
r-cran-pvclust,
r-cran-qtl,
@@ -1188,7 +1227,8 @@ Recommends: abyss,
Suggests: bagpipe,
cufflinks,
embassy-phylip,
- gmap
+ gmap,
+ qiime
Description: Debian Med bioinformatics applications usable in cloud computing
This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences, that do not
@@ -1230,8 +1270,7 @@ Architecture: all
Depends: ${misc:Depends},
med-config (= ${source:Version}),
med-tasks (= ${source:Version})
-Recommends: epigrass,
- r-cran-diagnosismed,
+Recommends: r-cran-diagnosismed,
r-cran-epi,
r-cran-epibasix,
r-cran-epicalc,
@@ -1243,6 +1282,7 @@ Recommends: epigrass,
r-cran-sjplot,
r-cran-surveillance
Suggests: epifire,
+ epigrass,
netepi-analysis,
netepi-collection,
python-treetime,
@@ -1293,7 +1333,6 @@ Depends: ${misc:Depends},
med-tasks (= ${source:Version})
Recommends: aeskulap,
amide,
- ants,
bart,
bart-view,
biosig-tools,
@@ -1334,8 +1373,6 @@ Recommends: aeskulap,
pixelmed-apps,
plastimatch,
python-dicom,
- python-dipy,
- python-mvpa2,
python-nibabel,
python-nipy,
python-nipype,
@@ -1343,11 +1380,11 @@ Recommends: aeskulap,
python-surfer,
sigviewer,
sofa-apps,
- teem-apps,
voxbo,
vtk-dicom-tools,
xmedcon
Suggests: afni,
+ ants,
bioimagesuite,
bioimagexd,
blox,
@@ -1416,12 +1453,15 @@ Suggests: afni,
piano,
pngquant,
pymeg,
+ python-dipy,
+ python-mvpa2,
python-pyxid,
python-tifffile,
science-workflow,
slicer,
stabilitycalc,
stir,
+ teem-apps,
tempo,
tifffile,
trimage,
@@ -1473,12 +1513,11 @@ Recommends: cimg-dev,
libopensurgsim-dev,
libpapyrus3-dev,
libsimpleitk1-dev,
- libteem-dev,
libvigraimpex-dev,
libvistaio-dev,
libvolpack1-dev,
libvtk-dicom-dev,
- libvtk6-dev,
+ libvtk7-dev,
libxdf-dev,
octave-bart,
octave-dicom,
@@ -1486,11 +1525,9 @@ Recommends: cimg-dev,
odin,
python-cfflib,
python-dicom,
- python-dipy,
python-imageio,
python-mia | python3-mia,
python-mne,
- python-mvpa2,
python-nibabel,
python-nipy,
python-nipype,
@@ -1514,11 +1551,15 @@ Suggests: emokit,
libnifti-doc,
libopenmeeg-dev,
libopenslide-java,
+ libteem-dev,
libvia-dev,
libvmtk-dev,
+ libvtk6-dev,
libxdffileio-dev,
+ python-dipy,
python-gdcm,
python-libavg,
+ python-mvpa2,
python-tifffile,
python-vmtk
Description: Debian Med image processing and visualization packages development
@@ -1644,34 +1685,21 @@ Depends: ${misc:Depends},
med-tasks (= ${source:Version})
Recommends: praat,
psignifit,
- psychopy,
python-pyepl,
r-cran-foreign,
- r-cran-psy
-Suggests: miscpsycho,
- psych,
- psychometric,
- psychotree,
- psyphy,
+ r-cran-psy,
+ r-cran-psych
+Suggests: psychopy,
python-pypsignifit,
python-visionegg,
+ r-cran-psychometric,
+ r-cran-psychotree,
+ r-cran-psyphy,
science-psychophysics
Description: Debian Med packages for psychology
This metapackage contains dependencies for a collection of software
which might be helpful for psychological research.
-Package: med-rehabilitation
-Section: metapackages
-Architecture: all
-Depends: ${misc:Depends},
- med-config (= ${source:Version}),
- med-tasks (= ${source:Version})
-Recommends: sitplus
-Suggests: aghermann
-Description: Debian Med packages for rehabilitation technologies
- This metapackage will install tools that are useful for
- rehabilitation and therapy.
-
Package: med-research
Section: metapackages
Architecture: all
=====================================
dependency_data/debian-med_3.3.json
=====================================
@@ -0,0 +1 @@
+{"cms": {"depends": [], "suggests": ["zope-zms", "hid"], "recommends": ["xnat"], "ignore": [], "avoid": []}, "bio": {"depends": [], "suggests": ["dascrubber", "emboss-explorer", "adun.app", "cain", "science-workflow", "getdata", "metastudent-data", "metastudent-data-2", "metastudent-data-3", "mrs", "r-cran-forecast", "r-bioc-annotationhub", "r-bioc-aroma.light", "r-bioc-ensembldb", "r-bioc-go.db", "r-bioc-savr", "r-cran-qqman", "r-cran-rentrez", "r-cran-boolnet", "r-cran-pheatmap", "mobyle", "mobyle-programs", "mobyle-tutorials", "maude"], "recommends": ["altree", "beast-mcmc", "beast2-mcmc", "fastdnaml", "njplot", "tree-puzzle | tree-ppuzzle", "probalign", "treeviewx", "figtree", "hyphy-mpi | hyphy-pt", "spread-phy", "omegamap", "sweed", "phylip", "fastlink", "loki", "plink", "plink1.9", "r-cran-qtl", "r-cran-genabel", "gemma", "bolt-lmm", "amap-align", "boxshade", "fastx-toolkit", "gff2aplot", "muscle", "sim4", "sibsim4", "tabix", "tophat", "wise", "maqview", "blasr", "daligner", "mhap", "bwa", "mummer", "e-mem", "ncbi-blast+-legacy", "plast", "ncbi-blast+", "mafft", "sra-toolkit", "t-coffee", "kalign", "ghmm", "hmmer", "gramalign", "exonerate", "elph", "dialign", "dialign-tx", "poa", "probcons", "proda", "seaview", "sigma-align", "emboss", "embassy-domalign", "embassy-domainatrix", "embassy-domsearch", "embassy-phylip", "arb", "clustalx", "clustalo", "clustalw", "mothur", "bowtie", "bowtie2", "transtermhp", "last-align", "maq", "ssake", "velvet | velvet-long", "qiime", "scoary", "umap", "infernal", "rnahybrid", "adun-core", "avogadro", "garlic", "gamgi", "gdpc", "ghemical", "jmol", "pymol", "r-cran-bio3d", "msxpertsuite", "gromacs", "rasmol", "viewmol", "qutemol", "modeller", "plasmidomics", "gff2ps", "ncbi-epcr", "ncbi-tools-bin", "ncbi-tools-x11", "perlprimer", "readseq", "tigr-glimmer", "melting", "mipe", "primer3", "artemis", "gbrowse", "python3-biomaj3-daemon", "glam2", "raster3d", "phyml", "autodock", "autogrid", "autodock-vina", "autodocktools", "mgltools-pmv", "mgltools-vision", "mgltools-cadd", "mustang", "probabel", "theseus", "staden-io-lib-utils", "samtools", "bedtools", "datamash", "gassst", "hinge", "r-bioc-hilbertvis", "r-other-mott-happy.hbrem", "seq-gen", "snp-sites", "mira-assembler", "alien-hunter", "seqan-apps", "ncoils", "gentle", "gmap", "igv", "picard-tools", "acedb-other", "blixem", "dotter", "belvu", "python-cogent", "paml", "velvetoptimiser", "ensembl", "mrbayes", "pdb2pqr", "squizz", "clonalframe", "clonalframeml", "dssp", "jellyfish", "jellyfish1", "ballview", "pynast", "raxml", "mlv-smile", "cd-hit", "cufflinks", "r-bioc-cummerbund", "eigensoft", "grinder", "jalview", "reprof", "tm-align", "norsnet", "norsp", "predictnls", "prime-phylo", "proftmb", "profbval", "profisis", "hhsuite", "ffindex", "flexbar", "blimps-utils", "sift", "neobio", "ray", "ugene", "logol", "soapdenovo", "soapdenovo2", "soapsnp", "soapaligner", "microbiomeutil", "chimeraslayer", "nast-ier", "wigeon", "minia", "trimmomatic", "saint", "rtax", "rate4site", "rna-star", "sailfish", "topp", "openms", "scythe", "sickle", "smalr", "kmc", "king-probe", "ncl-tools", "tvc", "libvcflib-tools", "bppsuite", "bppphyview", "acacia", "adapterremoval", "aegean", "andi", "arden", "artfastqgenerator", "art-nextgen-simulation-tools", "assemblytics", "augustus", "baitfisher", "bandage", "beagle", "bedops", "biceps", "cnvkit", "csb", "diamond-aligner", "emperor", "euler2", "euler-sr", "fitgcp", "gasic", "giira", "ipig", "aevol", "alter-sequence-alignment", "amos-assembler", "hawkeye", "anfo", "apollo", "aragorn", "ariba", "atac", "atropos", "axe-demultiplexer", "axparafit", "axpcoords", "bali-phy", "barrnap", "bamtools", "bagpipe", "bax2bam", "bcbio", "bcftools", "bigsdb", "bio-eagle", "bio-tradis", "biobambam2", "biosyntax", "bismark", "bitseq", "blat", "blobology", "bio-rainbow", "braker", "card-rgi", "cassiopee", "ccs", "cdbfasta", "centrifuge", "cellprofiler", "chromhmm", "cgview", "brig", "cct", "cinema", "circlator", "clearcut", 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"radiant", "lefse", "mach-haplotyper", "macs", "macsyfinder", "maffilter", "mage2tab", "tab2mage", "malt", "manta", "mapdamage", "martj", "mash", "progressivemauve", "mauve-aligner", "meme", "meryl", "metabit", "metaphlan2", "metastudent", "microbegps", "miniasm", "minimac4", "minimap", "minimap2", "mirtop", "molekel", "mosaik-aligner", "mosdepth", "mpsqed", "mptp", "mugsy", "multiqc", "murasaki | murasaki-mpi", "mview", "nanocall", "nanook", "nanopolish", "ncbi-entrez-direct", "ncbi-seg", "nextsv", "ngila", "ngsqctoolkit", "nw-align", "oases", "obitools", "oncofuse", "optimir", "optitype", "paipline", "pal2nal", "paleomix", "paraclu", "parsinsert", "parsnp", "partitionfinder", "patman", "patristic", "pbalign", "pbbarcode", "pbdagcon", "pbsuite", "pbgenomicconsensus", "pbjelly", "pbhoney", "pbh5tools", "pbsim", "pcma", "perm", "pftools", "phast", "phipack", "phybin", "phylophlan", "phyloviz-core", "phyutility", "phyx", "physamp", "piler", "pilercr", "pilon", "pipasic", "inspect", 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"python3-gfapy", "libgoby-java", "python3-seqcluster", "python3-cyvcf2", "libgatbcore-dev", "python3-airr", "python3-presto", "python3-bcbio", "libpll-dev", "libstatgen-dev", "python3-screed", "python3-treetime", "libbio-tools-run-alignment-tcoffee-perl", "libbio-asn1-entrezgene-perl", "libbio-chado-schema-perl", "libbio-samtools-perl", "libbio-scf-perl", "libbio-tools-phylo-paml-perl", "libbio-tools-run-alignment-clustalw-perl", "python3-pybel", "python3-mirtop", "libnexml-java", "python3-cgecore"], "ignore": ["golang-github-biogo-hts-dev"], "avoid": []}, "statistics": {"depends": [], "suggests": ["science-statistics"], "recommends": ["r-bioc-limma", "r-bioc-qvalue", "r-cran-randomforest", "r-cran-beeswarm", "r-cran-pvclust", "rstudio", "r-bioc-multtest", "r-cran-ade4", "r-cran-rwave", "r-cran-snowfall", "r-cran-wavethresh", "r-cran-waveslim"], "ignore": [], "avoid": []}, "tools": {"depends": [], "suggests": ["cycle", "mencal", "entangle", "goldencheetah", "sleepyhead"], "recommends": ["pcalendar", "pondus", "mssstest", "wgerman-medical", "hunspell-de-med", "quitcount", "workrave", "edfbrowser", "hunspell-en-med", "python-clips", "cronometer", "python-fitbit", "r-cran-fitcoach", "r-cran-fitbitscraper", "galileo", "nut-nutrition", "nutsqlite", "pesco"], "ignore": [], "avoid": []}, "imaging-dev": {"depends": [], "suggests": ["libvtk6-dev", "libnifti-doc", "libfreeimage-dev", "libics-dev", "liblimereg-dev", "python-libavg", "emokit", "libeegdev-dev", "libxdffileio-dev", "python-tifffile", "libcamp-dev"], "recommends": ["ctn-dev", "cimg-dev", "libminc-dev", "libmdc2-dev", "libvtk7-dev", "libnifti-dev", "libinsighttoolkit4-dev", "libvolpack1-dev", "libgdcm2-dev", "python-gdcm", "libopensurgsim-dev", "libmaxflow-dev", "python-mvpa2", "python-nipy", "python-nipype", "python-nitime", "libvia-dev", "odin", "libcv-dev", "libteem-dev", "gmic", "libgiftiio-dev", "libvistaio-dev", "libmia-2.4-dev", "libmiaviewit-dev", "libmialm-dev", "python-mia | python3-mia", "libopenigtlink-dev", "r-cran-rniftilib", "libmni-perllib-perl", "python-dicom", "libopenmeeg-dev", "python-nibabel", "libgdf-dev", "octave-gdf", "python-pyxnat", "python-dipy", "libbiosig-dev", "python3-biosig", "libctk-dev", "python-cfflib", "libopenslide-dev", "python-openslide", "libopenslide-java", "libbio-formats-java", "octave-dicom", "libcamitk-dev", "libpapyrus3-dev", "python-mne", "python-vmtk", "libvmtk-dev", "libvigraimpex-dev", "python-vigra", "libvtk-dicom-dev", "libedf-dev", "python-imageio", "libismrmrd-dev", "libodil-dev", "libbart-dev", "octave-bart", "libcifti-dev", "libxdf-dev", "libsimpleitk1-dev", "python3-simpleitk"], "ignore": [], "avoid": []}}
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View it on GitLab: https://salsa.debian.org/blends-team/med/compare/04a43ece5c6467dcc8c739d3e5002e66eb148942...fc2f0d4001571736f74d86195aee610bf49f8b85
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View it on GitLab: https://salsa.debian.org/blends-team/med/compare/04a43ece5c6467dcc8c739d3e5002e66eb148942...fc2f0d4001571736f74d86195aee610bf49f8b85
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