[Blends-commit] [Git][blends-team/science][master] 8 commits: python-mmtk was removed from Debian (see #821214)

Tue Oct 1 12:18:58 BST 2019


Andreas Tille pushed to branch master at Debian Blends Team / science


Commits:
b91126bb by Andreas Tille at 2019-10-01T10:59:54Z
python-mmtk was removed from Debian (see #821214)

- - - - -
edb4eee3 by Andreas Tille at 2019-10-01T11:03:14Z
python-mzml was removed to python-pymzml (which has Python3 support)

- - - - -
4e3d04d0 by Andreas Tille at 2019-10-01T11:04:41Z
No need to comment prospective package python-orange

- - - - -
33f99985 by Andreas Tille at 2019-10-01T11:07:19Z
Recommend python3-brial instead of python-polybori

- - - - -
afae121b by Andreas Tille at 2019-10-01T11:10:26Z
No need to uncomment preliminary package

- - - - -
cdddbe90 by Andreas Tille at 2019-10-01T11:11:39Z
python-stats was removed from Debian (see #620159)

- - - - -
912e99c5 by Andreas Tille at 2019-10-01T11:14:13Z
Prospective package python3-timbl

- - - - -
df602e4f by Andreas Tille at 2019-10-01T11:18:32Z
Prospective package python3-xrayutilities

- - - - -


7 changed files:

- tasks/chemistry
- tasks/dataacquisition-dev
- tasks/economics
- tasks/linguistics
- tasks/machine-learning
- tasks/mathematics-dev
- tasks/statistics


Changes:

=====================================
tasks/chemistry
=====================================
@@ -49,8 +49,6 @@ Recommends: openfoam
 
 Recommends: pyfai
 
-#Recommends: python-mmtk
-
 Recommends: libegad
 Homepage: http://egad.ucsd.edu/egad/
 WNPP: 429693
@@ -165,9 +163,9 @@ Recommends: pdb2pqr
 
 Recommends: mmass, mmass-modules
 
-#Recommends: python-mzml
+Recommends: python3-pymzml
 
-Suggests: python-mzml-doc
+Suggests: python-pymzml-doc
 
 Recommends: tandem-mass
 


=====================================
tasks/dataacquisition-dev
=====================================
@@ -9,7 +9,15 @@ Recommends: libnarval1-dev
 
 Recommends: libtango-dev, liblog4tango-dev
 
-#Recommends: python-xrayutilities
+Recommends: python3-xrayutilities
+WNPP: 723017
+Responsible: Eugen Wintersberger <eugen.wintersberger at gmail.com>
+Homepage: http://xrayutilities.sourceforge.net/
+Pkg-Description: Python package for xray data reduction and analysis
+ xrayutilities is a collection of scripts used to reduce and analyze x-ray
+ diffraction data. It consists of a python package and several routines written
+ in C. It especially useful for the reciprocal space conversion of diffraction
+ data taken with linear and area detectors.
 
 Recommends: libsdsl-dev
 


=====================================
tasks/economics
=====================================
@@ -97,10 +97,12 @@ Pkg-Description: MATLAB solver for DSGE models
  but not large-scale models. For solving large-scale problems, but without
  complementarity equations, see Dynare or similar toolboxes.
 
-#Recommends: python-quantecon
-#Homepage: https://quantecon.org/quantecon-py
-#License: BSD-3-clause
-#Pkg-Description: high performance, open source Python code library for economics
+Recommends: python3-quantecon
+Homepage: https://quantecon.org/quantecon-py
+License: BSD-3-clause
+Pkg-Description: high performance, open source Python code library for economics
+ QuantEcon provides a high performance, open source Python code library
+ for economics.
 
 Recommends: r-cran-ecdat
 Homepage: https://CRAN.R-project.org/package=Ecdat


=====================================
tasks/linguistics
=====================================
@@ -22,8 +22,29 @@ Suggests: libtimbl3-dev, libtimbl4-dev, libtimblserver2-dev, libmbt0-dev, libuct
 
 Recommends: collatinus
 
-#Suggests: python-timbl
-#WNPP: 705129
+Recommends: python3-timbl
+WNPP: 705129
+Responsible: Maarten van Gompel <proycon at anaproy.nl>
+Homepage: http://github.com/proycon/python-timbl/
+Pkg-Description: Python bindings for the Tilburg Memory Based Learner (Timbl)
+ python-timbl is a Python extension module wrapping the full TiMBL C++
+ programming interface. With this module, all functionality exposed
+ through the C++ interface is also available to Python scripts. Being
+ able to access the API from Python greatly facilitates prototyping
+ TiMBL-based applications.
+ .
+ TiMBL is an open source software package implementing several
+ memory-based learning algorithms, among which IB1-IG, an
+ implementation of k-nearest neighbor classification with feature
+ weighting suitable for symbolic feature spaces, and IGTree, a
+ decision-tree approximation of IB1-IG. All implemented algorithms have
+ in common that they store some representation of the training set
+ explicitly in memory. During testing, new cases are classified by
+ extrapolation from the most similar stored cases.
+ .
+ The Python module offers both a high-level as well as a low-level
+ interface, the former is very Pythonic and easy to use while the
+ latter offers the full API.
 
 Suggests: wnsqlbuilder
 Homepage: http://wnsqlbuilder.sf.net


=====================================
tasks/machine-learning
=====================================
@@ -103,16 +103,16 @@ Meta-Suggests: svn://svn.debian.org/blends/projects/science/trunk/debian-science
  ; Added by blends-inject 0.0.7. [now official package]
 #Recommends: python-pebl
 
-#Recommends: python-orange
-#License: GPLv3
-#Homepage: http://orange.biolab.si/
-#Pkg-URL: http://orange.biolab.si/debian/
-#Responsible: Mitar <mmitar at gmail.com>
-#Pkg-Description: Data mining framework
-# Orange is a component-based data mining software. It includes a range
-# of data visualization, exploration, preprocessing and modeling
-# techniques. It can be used through a nice and intuitive user interface
-# or, for more advanced users, as a module for Python programming language.
+Recommends: python3-orange
+License: GPLv3
+Homepage: http://orange.biolab.si/
+Pkg-URL: http://orange.biolab.si/debian/
+Responsible: Mitar <mmitar at gmail.com>
+Pkg-Description: Data mining framework
+ Orange is a component-based data mining software. It includes a range
+ of data visualization, exploration, preprocessing and modeling
+ techniques. It can be used through a nice and intuitive user interface
+ or, for more advanced users, as a module for Python programming language.
 
 #Recommends: python-pymc
 


=====================================
tasks/mathematics-dev
=====================================
@@ -134,7 +134,7 @@ Recommends: liblevmar-dev
 
 Recommends: libpolybori-dev, libpolybori-groebner-dev
 
-#Recommends: python-polybori
+Recommends: python3-brial
 
 Recommends: libquadrule-dev
 


=====================================
tasks/statistics
=====================================
@@ -48,8 +48,6 @@ Recommends: r-cran-ggplot2, r-cran-reshape2
 
 Recommends: psignifit
 
-#Recommends: python-stats
-
 Recommends: python3-scipy
 Why: Provides scipy.stats module
 



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