[Blends-commit] [Git][blends-team/med][master] Use Python3 dependencies whenever these are existing

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
859336e1 by Andreas Tille at 2019-09-06T12:38:40Z
Use Python3 dependencies whenever these are existing

- - - - -


4 changed files:

- tasks/cloud
- tasks/data
- tasks/imaging
- tasks/imaging-dev


Changes:

=====================================
tasks/cloud
=====================================
@@ -66,5 +66,5 @@ X-End-Category: Tools for the molecular biologist.
 X-Begin-Category: Others
 Recommends: aevol, python3-biomaj3-cli, bioperl, bioperl-run, cain,
             clonalframe, circos, datamash, prodigal,
-            python-biopython, python3-biopython, qiime, r-cran-pvclust,
+            python3-biopython, qiime, r-cran-pvclust,
             r-cran-vegan


=====================================
tasks/data
=====================================
@@ -6,7 +6,7 @@ Description: Debian Med drug databases
 
 Recommends: freediams, freemedforms-freedata
 
-Recommends: python-hl7
+Recommends: python3-hl7
 
 Suggests: sleepyhead
 WNPP: 780060


=====================================
tasks/imaging
=====================================
@@ -11,7 +11,7 @@ Description: Debian Med image processing and visualization packages
  - either from a graphical user interface, the command  line, or implemented in
  workflows.
 
-Recommends: amide, ctsim, ctn, dicomnifti, imagej, minc-tools, medcon, python-nibabel, python-dicom, xmedcon, dcmtk
+Recommends: amide, ctsim, ctn, dicomnifti, imagej, minc-tools, medcon, python3-nibabel, python3-dicom, xmedcon, dcmtk
 
 Suggests: imagemagick, pngquant, imview, trimage
 
@@ -530,7 +530,7 @@ Published-Year: 2011
  ; Added by blends-inject 0.0.7. [Now official package]
 Recommends: sigviewer
 
-Recommends: python-tifffile
+Recommends: tifffile
 
 Recommends: mni-icbm152-nlin-2009
 Homepage: http://www.bic.mni.mcgill.ca/ServicesAtlases/ICBM152NLin2009


=====================================
tasks/imaging-dev
=====================================
@@ -57,7 +57,7 @@ Recommends: libvistaio-dev
 
 Recommends: libmia-2.4-dev, libmiaviewit-dev, libmialm-dev
 
-Recommends: python-mia | python3-mia
+Recommends: python3-mia
 
 Recommends: libopenigtlink-dev
 
@@ -76,13 +76,11 @@ Remark: There was some previous work on this software which is stalled currently
  http://mentors.debian.net/cgi-bin/sponsor-pkglist?action=details;package=libmni-perllib-perl
  to Debian Med svn and start group maintenance.
 
-Recommends: python-dicom
-License: MIT
-Pkg-URL: http://neuro.debian.net/pkgs/python-dicom.html
+Recommends: python3-dicom
 
 Recommends: libopenmeeg-dev
 
-Recommends: python-nibabel
+Recommends: python3-nibabel
 
 Recommends: libgdf-dev, octave-gdf
 
@@ -108,7 +106,7 @@ Recommends: python-cfflib
 
 Recommends: libopenslide-dev
 
-Recommends: python-openslide
+Recommends: python3-openslide
 
 Recommends: libopenslide-java
 
@@ -128,7 +126,7 @@ Recommends: libpapyrus3-dev
 
 Recommends: python-mne
 
-Suggests: python-tifffile
+Suggests: tifffile
 
 Recommends: python-vmtk, libvmtk-dev
 



View it on GitLab: https://salsa.debian.org/blends-team/med/commit/859336e16dbcd915115d70d8bbc6c45dce6c73ba

-- 
View it on GitLab: https://salsa.debian.org/blends-team/med/commit/859336e16dbcd915115d70d8bbc6c45dce6c73ba
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/blends-commit/attachments/20190906/32c0f37f/attachment-0001.html>