[Blends-commit] [Git][blends-team/med][master] Update bio - some merging with the covid-19 task list

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Blends Team / med


Commits:
26035fed by Steffen Möller at 2020-07-07T15:04:20+00:00
Update bio - some merging with the covid-19 task list
- - - - -


1 changed file:

- tasks/bio


Changes:

=====================================
tasks/bio
=====================================
@@ -449,6 +449,10 @@ Suggests: baitfisher
 
 Suggests: bandage
 
+Suggests: bbmap
+
+Suggests: bcalm
+
 Suggests: beagle
 
 Suggests: bedops
@@ -625,6 +629,8 @@ Suggests: emmax
 
 Suggests: ensembl-vep
 
+Suggests: epigrass
+
 Suggests: examl, raxml-ng
 
 Suggests: exabayes
@@ -914,8 +920,6 @@ Recommends: optitype
 
 Recommends: paipline
 
-Recommends: python3-pairtools
-
 Recommends: pal2nal
 
 Recommends: paleomix
@@ -1031,29 +1035,45 @@ Recommends: pssh2
 
 Recommends: pufferfish
 
+Recommends: pycorrfit
+
+Recommends: pyscanfcs
+
 Suggests: python3-alignlib
 
 Recommends: python3-cogent
 
-Recommends: pycorrfit
+Suggests: python3-cgecore 
 
-Recommends: pyscanfcs
+Suggests: python3-cyvcf2 
 
-Recommends: python3-deeptools, python3-deeptoolsintervals
+Suggests: python3-deeptools, python3-deeptoolsintervals
 
 Recommends: python3-geneimpacts
 
 Recommends: python3-gffutils
 
+Suggests: Python3-htseq
+
 Suggests: python3-loompy
 
-Recommends: python3-pybel
+Suggests: python3-nanomath
+
+Recommends: python3-pairtools
+
+Recommends: python3-pybedtools
+
+Suggests: python3-pybel
 
 Suggests: python3-pychopper
 
+Suggests: python3-pyfaidx 
+
+Suggests: python3-pyflow
+
 Suggests: python3-py2bit
 
-Recommends: python3-pybedtools
+Suggests: python3-pysam
 
 Recommends: python3-sqt
 
@@ -1111,6 +1131,8 @@ Suggests: r-cran-dynamictreecut
 
 Recommends: r-bioc-ebseq
 
+Suggests: r-cran-epir 
+
 Suggests: r-cran-forecast
 
 Suggests: r-cran-gprofiler
@@ -1466,8 +1488,6 @@ Recommends: r-cran-tcr, r-cran-tigger, r-cran-alakazam, r-cran-shazam, igor, r-c
 
 Recommends: ncbi-igblast
 
-Suggests: python3-pyflow
-
 Recommends: pigx-rnaseq, pigx-scrnaseq
 
 X-Mark: The information below needs to be checked whether it can be obtained from Vcs or needs to stay here



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/26035fed5503e0529a0db0f406801059ee11b5f9

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