[Blends-commit] [Git][blends-team/med][master] More dependencies, FIXME: Duplicated entry for tabix!

Andreas Tille gitlab at salsa.debian.org
Tue Jul 21 10:24:56 BST 2020



Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
8b11ef9b by Andreas Tille at 2020-07-21T11:24:25+02:00
More dependencies, FIXME: Duplicated entry for tabix!

- - - - -


2 changed files:

- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -282,7 +282,12 @@ INSERT INTO covid19_packages VALUES
 (DEFAULT,'python3-pandas'),
 (DEFAULT,'python3-sklearn'),
 (DEFAULT,'python3-toolz'),
-(DEFAULT,'python3-tornado')
+(DEFAULT,'python3-tornado'),
+(DEFAULT,'python3-tqdm'),
+(DEFAULT,'libxenium-dev'),
+(DEFAULT,'xonsh'),
+(DEFAULT,'golang-github-shenwei356-xopen-dev'),
+(DEFAULT,'python3-yaml')
 ;
 
 SELECT co.package, architectures, s.section,


=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 21 Jul 2020 09:03:15 +0200
+Last-Update: Tue, 21 Jul 2020 10:50:13 +0200
 
             package             |    architectures    | section  |                         releases                          |        conda         |     bio.tools      |              testsuite              
 --------------------------------+---------------------+----------+-----------------------------------------------------------+----------------------+--------------------+-------------------------------------
@@ -60,7 +60,7 @@ Last-Update: Tue, 21 Jul 2020 09:03:15 +0200
  flye                           |                     |          | https://salsa.debian.org/med-team/flye                    | flye                 |                    | 
  freebayes                      | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                       | freebayes            | freebayes          | autopkgtest
  gatk                           |                     |          | https://salsa.debian.org/med-team/gatk                    | gatk4                |                    | 
- python3-geneimpacts            | all                 | main     | bullseye,sid                                              | geneimpacts          |                    | autopkgtest-pkg-python
+ python3-geneimpacts            | all                 | main     | bullseye,sid                                              | geneimpacts          |                    | autopkgtest, autopkgtest-pkg-python
  gffread                        | amd64,arm64,ppc64el | main     | bullseye,sid                                              | gffread              | gffread            | autopkgtest
  python3-gffutils               | all                 | main     | buster,bullseye,sid                                       | gffutils             | GFFutils           | autopkgtest
  gindex                         |                     |          | https://salsa.debian.org/med-team/gindex                  |                      |                    | 
@@ -184,8 +184,8 @@ Last-Update: Tue, 21 Jul 2020 09:03:15 +0200
  streamformatics                |                     |          |                                                           |                      |                    | 
  strelka                        |                     |          | https://salsa.debian.org/med-team/strelka                 | strelka              |                    | 
  python3-streamz                | all                 | main     | bullseye,sid                                              |                      |                    | autopkgtest
- tabix                          | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                       | htslib               |                    | autopkgtest
  tabix                          | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                       | htslib               |                    | 
+ tabix                          | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                       | htslib               |                    | autopkgtest
  tiddit                         | amd64,arm64,ppc64el | main     | bullseye,sid                                              | tiddit               |                    | autopkgtest
  tombo                          | amd64,arm64         | main     | sid                                                       | ont-tombo            |                    | autopkgtest
  tophat-recondition             | all                 | main     | bullseye,sid                                              |                      |                    | 
@@ -219,5 +219,9 @@ Last-Update: Tue, 21 Jul 2020 09:03:15 +0200
  python3-sklearn                | all                 | main     | buster,bullseye,sid                                       |                      |                    | autopkgtest
  python3-toolz                  | all                 | main     | buster,bullseye,sid                                       |                      |                    | autopkgtest
  python3-tornado                | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                       |                      |                    | autopkgtest
-(217 Zeilen)
+ python3-tqdm                   | all                 | main     | buster,bullseye,sid                                       |                      |                    | 
+ libxenium-dev                  |                     |          |                                                           |                      |                    | 
+ xonsh                          | all                 | main     | buster,bullseye,sid                                       |                      |                    | autopkgtest
+ python3-yaml                   | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                       |                      |                    | autopkgtest
+(221 Zeilen)
 



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/8b11ef9b991109e47e85747d166384a66a6fc94c

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View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/8b11ef9b991109e47e85747d166384a66a6fc94c
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