[Blends-commit] [Git][blends-team/med][master] Add bbhash, update packages

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
d2475f21 by Andreas Tille at 2020-06-03T15:51:45+02:00
Add bbhash, update packages

- - - - -


2 changed files:

- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -75,6 +75,7 @@ INSERT INTO covid19_packages VALUES
 ('r-other-ascat'),
 ('augustus'),
 ('bandage'),
+('libbbhash-dev'),
 ('bcftools'),
 ('bedtools'),
 ('python3-biopython'),


=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Mon, 01 Jun 2020 15:53:51 +0200
+Last-Update: Wed, 03 Jun 2020 14:13:24 +0200
 
        package       |    architectures    | section  |                   releases                    |        conda         |  bio.tools   |              testsuite              
 ---------------------+---------------------+----------+-----------------------------------------------+----------------------+--------------+-------------------------------------
@@ -24,14 +24,15 @@ Last-Update: Mon, 01 Jun 2020 15:53:51 +0200
  fastp               | amd64,arm64,ppc64el | main     | buster,bullseye,sid                           | fastp                |              | autopkgtest
  fastqc              | all                 | main     | buster,bullseye,sid                           | fastqc               | FastQC       | autopkgtest
  filtlong            | amd64,arm64,ppc64el | main     | bullseye,sid                                  | filtlong             |              | autopkgtest
- flash               | amd64,arm64,ppc64el | main     | sid                                           | flash                |              | 
- freebayes           | amd64,arm64,ppc64el | main     | buster,bullseye,sid                           | freebayes            | freebayes    | 
+ flash               | amd64,arm64,ppc64el | main     | bullseye,sid                                  | flash                |              | 
+ freebayes           | amd64,arm64,ppc64el | main     | buster,bullseye,sid                           | freebayes            | freebayes    | autopkgtest
  gatk                |                     |          | https://salsa.debian.org/med-team/gatk        | gatk4                |              | 
  graphmap2           |                     |          | https://salsa.debian.org/med-team/graphmap2   | graphmap             |              | 
  ivar                | amd64,arm64         | main     | bullseye,sid                                  | ivar                 |              | 
  kallisto            | amd64,arm64,ppc64el | main     | bullseye,sid                                  | kallisto             | kallisto     | autopkgtest
  kmc                 | amd64,arm64,ppc64el | main     | buster,bullseye,sid                           | kmc                  | KMC          | autopkgtest
  kraken2             | amd64,arm64,ppc64el | main     | bullseye,sid                                  | kraken2              | kraken       | autopkgtest
+ libbbhash-dev       |                     |          |                                               |                      |              | 
  libhts-dev          | amd64,arm64,ppc64el | main     | buster,bullseye,sid                           | htslib               |              | autopkgtest
  lighter             |                     |          | new                                           | lighter              |              | 
  lumpy-sv            |                     |          | https://salsa.debian.org/med-team/lumpy-sv    | lumpy-sv             |              | 
@@ -100,5 +101,5 @@ Last-Update: Mon, 01 Jun 2020 15:53:51 +0200
  velvet              | amd64,arm64,ppc64el | main     | buster,bullseye,sid                           | velvet               | velvet       | autopkgtest
  vg                  | amd64               | main     | bullseye,sid                                  | vg                   |              | autopkgtest
  vsearch             | amd64,ppc64el       | main     | buster,bullseye,sid                           | vsearch              | vsearch      | 
-(98 Zeilen)
+(99 Zeilen)
 



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/d2475f21a266af44ea20c0da139aefeeb9fd1b30

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View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/d2475f21a266af44ea20c0da139aefeeb9fd1b30
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