[Blends-commit] [Git][blends-team/med][master] 2 commits: Add Recommends: signalalign

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
fbd5bef6 by Andreas Tille at 2020-06-15T11:46:46+02:00
Add Recommends: signalalign

- - - - -
d9312b8b by Andreas Tille at 2020-06-15T12:37:02+02:00
Add tombo and lastz

- - - - -


3 changed files:

- covid-19_doc/bio_covid-19_dependencies_query
- tasks/bio
- tasks/covid-19


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -201,6 +201,7 @@ INSERT INTO covid19_packages VALUES
 (DEFAULT,'seqkit'),
 (DEFAULT,'seqtk'),
 (DEFAULT,'seqwish'),
+(DEFAULT,'signalalign'),
 (DEFAULT,'skesa'),
 (DEFAULT,'snpeff'),
 (DEFAULT,'snpsift'),


=====================================
tasks/bio
=====================================
@@ -758,6 +758,8 @@ X-Category: Comparative genomics
 
 Recommends: lambda-align, lambda-align2
 
+Recommends: lastz
+
 Recommends: leaff
 
 Recommends: ltrsift
@@ -1256,6 +1258,8 @@ Suggets: sga
 
 Suggests: sibelia
 
+Recommends: signalalign
+
 Suggests: sina
 
 Recommends: sistr
@@ -1353,6 +1357,8 @@ Recommends: tn-seqexplorer
 
 Recommends: toil
 
+Recommends: tombo
+
 Recommends: tracetuner
 
 Recommends: transrate-tools


=====================================
tasks/covid-19
=====================================
@@ -205,6 +205,10 @@ Recommends: sepp
 
 Recommends: seqwish
 
+Recommends: signalalign
+
+Recommends: tombo
+
 Recommends: vsearch
 
 X-Comment: https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit?ts=5eb957ba#gid=543782716
@@ -219,6 +223,8 @@ Recommends: flash
 
 Recommends: flye
 
+Recommends: lastz
+
 Recommends: lighter
 
 Recommends: lumpy-sv



View it on GitLab: https://salsa.debian.org/blends-team/med/-/compare/ff62526054bb0f6408a23988271727e2ac6e2cd5...d9312b8b1c1177327a57ac3403d66f03a8330779

-- 
View it on GitLab: https://salsa.debian.org/blends-team/med/-/compare/ff62526054bb0f6408a23988271727e2ac6e2cd5...d9312b8b1c1177327a57ac3403d66f03a8330779
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