[Blends-commit] [Git][blends-team/med][master] Update UDD data
Andreas Tille
gitlab at salsa.debian.org
Wed Jun 17 19:50:32 BST 2020
Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
3c9e20d8 by Andreas Tille at 2020-06-17T20:50:18+02:00
Update UDD data
- - - - -
2 changed files:
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -139,7 +139,7 @@ INSERT INTO covid19_packages VALUES
(DEFAULT,'kraken2'),
(DEFAULT,'radiant'), -- == krona - Debian had to change the name
(DEFAULT,'lighter'),
-(DEFAULT,'lsd'),
+(DEFAULT,'r-cran-lsd'),
(DEFAULT,'lumpy-sv'),
(DEFAULT,'magicblast'),
(DEFAULT,'manta'),
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 17 Jun 2020 10:15:01 +0200
+Last-Update: Wed, 17 Jun 2020 20:47:55 +0200
package | architectures | section | releases | conda | bio.tools | testsuite
------------------------+---------------------+----------+-----------------------------------------------------+----------------------+---------------+-------------------------------------
@@ -40,7 +40,7 @@ Last-Update: Wed, 17 Jun 2020 10:15:01 +0200
cat-bat | amd64,arm64,ppc64el | main | bullseye,sid | cat | |
centrifuge | amd64 | main | buster,bullseye,sid | centrifuge | Centrifuge |
changeo | all | main | buster,bullseye,sid | changeo | | autopkgtest-pkg-python
- python3-cooler | | | https://salsa.debian.org/med-team/python-cooler | cooler | |
+ python3-cooler | | | new | cooler | |
cutadapt | all | main | buster,bullseye,sid | cutadapt | cutadapt | autopkgtest-pkg-python
python3-cyvcf2 | amd64,arm64 | main | buster,bullseye,sid | cyvcf2 | | autopkgtest-pkg-python
diamond-aligner | amd64,arm64,ppc64el | main | buster,bullseye,sid | diamond | Diamond | autopkgtest
@@ -74,7 +74,7 @@ Last-Update: Wed, 17 Jun 2020 10:15:01 +0200
kraken2 | amd64,arm64,ppc64el | main | bullseye,sid | kraken2 | kraken | autopkgtest
radiant | all | main | buster,bullseye,sid | | krona |
lighter | | | new | lighter | |
- lsd | | | | | |
+ r-cran-lsd | | | https://salsa.debian.org/r-pkg-team/r-cran-lsd | | |
lumpy-sv | | | new | lumpy-sv | |
magicblast | | | | | |
manta | | | https://salsa.debian.org/med-team/manta | manta | |
@@ -152,7 +152,7 @@ Last-Update: Wed, 17 Jun 2020 10:15:01 +0200
seqkit | | | | | |
seqtk | amd64,arm64,ppc64el | main | buster,bullseye,sid | seqtk | seqtk | autopkgtest
seqwish | | | https://salsa.debian.org/med-team/seqwish | seqwish | |
- signalalign | | | | | |
+ signalalign | | | https://salsa.debian.org/med-team/signalalign | | |
skesa | amd64 | main | bullseye,sid | skesa | |
sniffles | amd64,arm64,ppc64el | main | buster,bullseye,sid | sniffles | sniffles | autopkgtest
snpeff | | | https://salsa.debian.org/med-team/snpeff | snpeff | |
@@ -164,7 +164,7 @@ Last-Update: Wed, 17 Jun 2020 10:15:01 +0200
strelka | | | https://salsa.debian.org/med-team/strelka | strelka | |
streamz | | | | | |
tiddit | | | new | tiddit | |
- tombo | | | | | |
+ tombo | | | https://salsa.debian.org/med-team/tombo | ont-tombo | |
tophat-recondition | all | main | bullseye,sid | | |
tornado | | | | | |
trim-galore | all | main | bullseye,sid | trim-galore | | autopkgtest
View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/3c9e20d8bb55546beed90efefdcedf819687486f
--
View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/3c9e20d8bb55546beed90efefdcedf819687486f
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