[Blends-commit] [Git][blends-team/med][master] magicblast is ncbi-magicblast

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
76bb459b by Andreas Tille at 2020-06-18T14:53:19+02:00
magicblast is ncbi-magicblast

- - - - -


4 changed files:

- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
- tasks/bio
- tasks/covid-19


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -142,7 +142,7 @@ INSERT INTO covid19_packages VALUES
 (DEFAULT,'lighter'),
 (DEFAULT,'r-cran-lsd'),
 (DEFAULT,'lumpy-sv'),
-(DEFAULT,'magicblast'),
+(DEFAULT,'ncbi-magicblast'),
 (DEFAULT,'manta'),
 (DEFAULT,'marginalign'),
 (DEFAULT,'mash'),


=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 18 Jun 2020 14:12:38 +0200
+Last-Update: Thu, 18 Jun 2020 14:44:56 +0200
 
         package         |    architectures    | section  |                      releases                       |        conda         |   bio.tools   |              testsuite              
 ------------------------+---------------------+----------+-----------------------------------------------------+----------------------+---------------+-------------------------------------
@@ -77,7 +77,7 @@ Last-Update: Thu, 18 Jun 2020 14:12:38 +0200
  lighter                |                     |          | new                                                 | lighter              |               | 
  r-cran-lsd             |                     |          | https://salsa.debian.org/r-pkg-team/r-cran-lsd      |                      |               | 
  lumpy-sv               |                     |          | new                                                 | lumpy-sv             |               | 
- magicblast             |                     |          |                                                     |                      |               | 
+ ncbi-magicblast        |                     |          | https://salsa.debian.org/med-team/ncbi-magicblast   | magicblast           |               | 
  manta                  |                     |          | https://salsa.debian.org/med-team/manta             | manta                |               | 
  marginalign            |                     |          |                                                     |                      |               | 
  mash                   | amd64,arm64,ppc64el | main     | buster,bullseye,sid                                 | mash                 |               | autopkgtest


=====================================
tasks/bio
=====================================
@@ -872,6 +872,8 @@ Recommends: ncbi-acc-download
 
 Recommends: ncbi-entrez-direct
 
+Recommends: ncbi-magicblast
+
 Recommends: ncbi-seg
 
 Recommends: nextsv


=====================================
tasks/covid-19
=====================================
@@ -229,6 +229,8 @@ Recommends: lighter
 
 Recommends: lumpy-sv
 
+Recommends: ncbi-magicblast
+
 Recommends: nanofilt
 
 Recommends: python3-nanomath



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/76bb459bc93f1f926c0d354c02026d4f75e53df4

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View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/76bb459bc93f1f926c0d354c02026d4f75e53df4
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