[Blends-commit] [Git][blends-team/med][master] ascat is r-other-ascat

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
154220e9 by Andreas Tille at 2020-05-12T13:26:20+02:00
ascat is r-other-ascat

- - - - -


3 changed files:

- covid-19_doc/bio_covid-19_dependencies_query
- tasks/bio
- tasks/covid-19


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -71,7 +71,7 @@ INSERT INTO covid19_packages VALUES
 ('nf-core'),
 ('abacas'),
 ('allelecount'),
-('ascat'),
+('r-other-ascat'),
 ('bcftools'),
 ('bedtools'),
 ('python3-biopython'),


=====================================
tasks/bio
=====================================
@@ -1094,6 +1094,8 @@ Recommends: r-other-hms-dbmi-spp
 
 Recommends: r-cran-wgcna
 
+Recommends: r-other-ascat
+
 Recommends: recan
 
 Recommends: relion-bin+gui | relion-bin+mpi+gui, relion-bin | relion-bin+mpi


=====================================
tasks/covid-19
=====================================
@@ -146,8 +146,7 @@ Recommends: fastqc
 
 Recommends: allelecount
 
-Recommends: ascat
-Homepage: https://github.com/Crick-CancerGenomics/ascat
+Recommends: r-other-ascat
 
 Recommends: freebayes
 



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/154220e95faa271e96979606f50d1cdb0a4c63cd

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