[Blends-commit] [Git][blends-team/med][master] Update status oc COVID-19 packages

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
3affc14e by Andreas Tille at 2020-05-18T22:12:33+02:00
Update status oc COVID-19 packages

- - - - -


1 changed file:

- covid-19_doc/bio_covid-19_dependencies_result


Changes:

=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,14 +1,14 @@
-Last-Update: Fri, 15 May 2020 22:24:02 +0200
+Last-Update: Mon, 18 May 2020 22:10:21 +0200
 
            package           |    architectures    | section  |                  releases                   |          conda           |  bio.tools   
 -----------------------------+---------------------+----------+---------------------------------------------+--------------------------+--------------
  abacas                      | all                 | main     | buster,bullseye,sid                         |                          | 
- allelecount                 |                     |          | new                                         |                          | 
+ allelecount                 | amd64,arm64,ppc64el | main     | sid                                         | cancerit-allelecount     | 
  bcftools                    | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | bcftools                 | bcftools
  bedtools                    | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | biotools                 | bedtools
  bio-guppy                   |                     |          |                                             |                          | 
  bowtie2                     | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | bowtie2                  | bowtie2
- busco                       |                     |          | new                                         |                          | 
+ busco                       | all                 | main     | sid                                         |                          | 
  bustools                    | amd64,arm64,ppc64el | main     | bullseye,sid                                | bustools                 | BUStools
  bwa                         | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | bwa                      | BWA
  cat                         |                     |          |                                             |                          | 
@@ -19,7 +19,7 @@ Last-Update: Fri, 15 May 2020 22:24:02 +0200
  drop-seq-tools              |                     |          |                                             |                          | 
  fastp                       | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | fastp                    | 
  fastqc                      | all                 | main     | buster,bullseye,sid                         | fastqc                   | FastQC
- filtlong                    |                     |          | new                                         |                          | 
+ filtlong                    | amd64,arm64,ppc64el | main     | bullseye,sid                                |                          | 
  freebayes                   | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | freebayes                | freebayes
  gatk                        |                     |          | https://salsa.debian.org/med-team/gatk      |                          | 
  graphmap2                   |                     |          | https://salsa.debian.org/med-team/graphmap2 |                          | 
@@ -40,7 +40,7 @@ Last-Update: Fri, 15 May 2020 22:24:02 +0200
  ncbi-blast+                 | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         | blast                    | blast
  nextflow                    |                     |          | https://salsa.debian.org/med-team/nextflow  |                          | 
  nf-core                     |                     |          |                                             |                          | 
- parallel-fastq-dump         |                     |          | new                                         |                          | 
+ parallel-fastq-dump         | all                 | main     | sid                                         |                          | 
  picard-tools                | amd64               | main     | buster,bullseye,sid                         | picard                   | Picard_tools
  porechop                    | amd64,arm64,ppc64el | main     | buster,bullseye,sid                         |                          | 
  presto                      |                     |          |                                             |                          | 



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/3affc14e21c4aa3a3469756746d572727b732d14

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View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/3affc14e21c4aa3a3469756746d572727b732d14
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