[Blends-commit] [Git][blends-team/science][master] 2 commits: Update to latest status of package pool and release
Andreas Tille
gitlab at salsa.debian.org
Wed Feb 24 19:06:37 GMT 2021
Andreas Tille pushed to branch master at Debian Blends Team / science
Commits:
9dbbb245 by Andreas Tille at 2021-02-24T18:10:17+01:00
Update to latest status of package pool and release
- - - - -
77d2115b by Andreas Tille at 2021-02-24T18:12:33+01:00
Arg, blends-dev is not able to cope with debhelper-compat yet
- - - - -
4 changed files:
- debian/changelog
- + debian/compat
- debian/control
- debian/control.stub
Changes:
=====================================
debian/changelog
=====================================
@@ -58,7 +58,7 @@ debian-science (1.14) unstable; urgency=medium
* New metapackages:
-science-datamanagement
- -- Andreas Tille <tille at debian.org> Tue, 06 Oct 2020 09:31:52 +0200
+ -- Andreas Tille <tille at debian.org> Wed, 24 Feb 2021 18:09:57 +0100
debian-science (1.13) unstable; urgency=medium
=====================================
debian/compat
=====================================
@@ -0,0 +1 @@
+13
=====================================
debian/control
=====================================
@@ -6,7 +6,7 @@ Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.
Uploaders: Andreas Tille <tille at debian.org>,
Ole Streicher <olebole at debian.org>
Build-Depends-Indep: blends-dev (>= 0.7~)
-Build-Depends: debhelper-compat (= 13)
+Build-Deoends: debhelper (>= 13)
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/blends-team/science
Vcs-Git: https://salsa.debian.org/blends-team/science.git
@@ -192,13 +192,22 @@ Recommends: adun.app,
chemeq,
chemical-mime-data,
chemical-structures,
+ chemtool,
+ cp2k,
drawxtl,
easychem,
+ gabedit,
galculator,
+ gamgi,
garlic,
gausssum,
+ gchempaint,
+ gcrystal,
+ gcu-bin,
+ gdis,
gdpc,
gelemental,
+ ghemical,
gperiodic,
gromacs | gromacs-mpich | gromacs-openmpi,
jmol,
@@ -206,6 +215,8 @@ Recommends: adun.app,
katomic,
libcdk-java,
mopac7-bin,
+ mpqc,
+ mpqc-support,
msxpertsuite,
openbabel,
openfoam,
@@ -221,18 +232,9 @@ Recommends: adun.app,
xbs,
xdrawchem
Suggests: bkchem,
- chemtool,
- cp2k,
fdmnes,
- gabedit,
- gamgi,
- gchempaint,
- gcrystal,
- gcu-bin,
gcu-plugin,
- gdis,
gdpc-examples,
- ghemical,
libegad,
libint,
libschroedinger-coordgenlibs-dev,
@@ -240,8 +242,6 @@ Suggests: bkchem,
mmass-modules,
molden,
molekel,
- mpqc,
- mpqc-support,
openchrom,
python-pymzml-doc,
python3-periodictable,
@@ -260,7 +260,8 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: csvkit,
+Recommends: clickhouse-tools,
+ csvkit,
engauge-digitizer,
filo,
g3data,
@@ -275,7 +276,6 @@ Recommends: csvkit,
xlsx2csv,
xyscan
Suggests: binoculars,
- clickhouse-tools,
comedi-source,
epics,
gnudatalanguage,
@@ -336,9 +336,9 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: git-annex
-Suggests: datalad,
- datalad-container
+Recommends: datalad,
+ datalad-container,
+ git-annex
Description: Debian Science Data Management packages
This metapackage will install packages to assist with data management
tasks, such as obtaining data from remote resources, keeping data
@@ -444,7 +444,8 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: libgdf-dev
+Recommends: libgdf-dev,
+ sigviewer
Suggests: aghermann,
bluespike,
chronus,
@@ -470,7 +471,6 @@ Suggests: aghermann,
rtxi,
science-dataacquisition,
science-neuroscience-modeling,
- sigviewer,
spike,
stimfit,
trellis-neuro
@@ -490,7 +490,8 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: calculix-cgx,
+Recommends: calculix-ccx,
+ calculix-cgx,
cba,
cgns-convert,
code-saturne,
@@ -498,6 +499,7 @@ Recommends: calculix-cgx,
fenics,
freecad,
gerris,
+ getdp,
gmsh,
libadios-bin,
librecad,
@@ -520,7 +522,6 @@ Recommends: calculix-cgx,
Suggests: ann-tools,
avl,
brlcad,
- calculix-ccx,
calculix-ccx-doc,
calculix-ccx-test,
calculix-cgx-examples,
@@ -530,7 +531,6 @@ Suggests: ann-tools,
ecs,
eficas,
feel++-apps,
- getdp,
hdfview,
logcentral,
logcentral-tools,
@@ -591,6 +591,7 @@ Recommends: code-saturne-bin,
libp4est-dev,
libplb-dev,
libsilo-dev,
+ libsis-jhdf5-java,
libslicot-dev,
libxdmf-dev,
python3-collada,
@@ -598,6 +599,7 @@ Recommends: code-saturne-bin,
python3-netcdf4,
python3-pygalmesh,
python3-pynfft,
+ python3-pyode,
r-cran-rnetcdf,
trilinos-all-dev
Suggests: ceres-solver-doc,
@@ -617,13 +619,11 @@ Suggests: ceres-solver-doc,
libmetis-edf-dev,
libopenturns-dev,
libqwt-dev | libqwt5-qt4-dev,
- libsis-jhdf5-java,
libslepc3.4.2-dev,
libtet1.4-dev,
libug-dev,
openturns-examples,
pycgns,
- python3-pyode,
salome-kernel-dev
Description: Debian Science Engineering-dev packages
This metapackage will install Debian Science packages which might be
@@ -975,11 +975,11 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: gwyddion
+Recommends: gwyddion,
+ teem-apps
Suggests: gpiv,
gpivtools,
- limereg,
- teem-apps
+ limereg
Description: Debian Science image analysis packages
This metapackage will install Debian Science packages related to
scientific image acquisition. This might be used in several
@@ -1142,7 +1142,8 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: alt-ergo,
+Recommends: agda,
+ alt-ergo,
boolector,
clasp,
coinor-cbc,
@@ -1165,8 +1166,7 @@ Recommends: alt-ergo,
toulbar2,
why3,
z3
-Suggests: agda,
- coala,
+Suggests: coala,
coinor-libcoinmp-dev,
cvc3,
mace2,
@@ -1195,6 +1195,7 @@ Recommends: autoclass,
libvigraimpex-dev,
mcl,
octave-ga,
+ python3-genetic,
python3-mdp,
python3-mlpy,
python3-opencv,
@@ -1233,7 +1234,6 @@ Suggests: flann,
lua-torch-xlua,
pgapack,
pybrain,
- python3-genetic,
root-system,
science-numericalcomputation,
science-statistics,
@@ -1255,6 +1255,7 @@ Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
Recommends: 4ti2,
+ agda,
auto-07p,
axiom,
bliss,
@@ -1287,16 +1288,19 @@ Recommends: 4ti2,
geogebra,
geomview,
gerris,
+ getdp,
gfan,
ginac-tools,
gmsh,
graphviz,
hol-light,
+ julia,
lcalc,
libmatheval1,
lp-solve,
lrcalc,
lrslib,
+ macaulay2,
magnus,
mathicgb,
mathomatic,
@@ -1321,8 +1325,10 @@ Recommends: 4ti2,
python3-ufl,
qhull-bin,
qsopt-ex,
+ regina-normal,
rheolef,
rubiks,
+ sagemath,
sagemath-database-conway-polynomials,
sagemath-database-elliptic-curves,
sagemath-database-graphs,
@@ -1342,8 +1348,7 @@ Recommends: 4ti2,
xcas,
xmaxima,
xmds2
-Suggests: agda,
- ann-tools,
+Suggests: ann-tools,
cliquer,
eprover,
evolver-ogl | evolver-nox,
@@ -1359,12 +1364,9 @@ Suggests: agda,
gap-small-groups,
gap-small-groups-extra,
gap-trans-groups,
- getdp,
gmp-ecm,
isabelle,
- julia,
kseg,
- macaulay2,
matita,
matlab-support,
model-builder,
@@ -1378,8 +1380,6 @@ Suggests: agda,
python3-openturns,
qepcad,
r-cran-evd,
- regina-normal,
- sagemath,
sagetex,
scilab-ann,
scilab-scimax,
@@ -1466,6 +1466,7 @@ Recommends: code-saturne-bin,
libmatio-dev,
libmpfi-dev,
libmpfrc++-dev,
+ libmps-dev,
libmuparser-dev,
libnauty2-dev,
libnewmat10-dev,
@@ -1485,9 +1486,11 @@ Recommends: code-saturne-bin,
libranlip-dev,
libratpoints-dev,
librw-dev,
+ libsaclib-dev,
libscscp1-dev,
libscythestat-dev,
libsopt-dev,
+ libsparskit-dev,
libspooles-dev,
libstxxl-dev,
libsuitesparse-dev,
@@ -1545,7 +1548,6 @@ Suggests: cfortran,
liblevmar-dev,
liblrs-dev,
libmkl-full-dev,
- libmps-dev,
libmtj-java,
libnetlib-java,
libntl-dev,
@@ -1554,9 +1556,7 @@ Suggests: cfortran,
libpolybori-dev,
libpolybori-groebner-dev,
libqrupdate-dev,
- libsaclib-dev,
libsollya-dev,
- libsparskit-dev,
libsuitesparse-metis-dev,
libtestu01-0-dev,
libtet1.4-dev,
@@ -1603,6 +1603,7 @@ Recommends: cdftools,
magics++,
makedepf90,
metview,
+ ncl-ncarg,
nco,
ncview,
python3-cdo,
@@ -1623,7 +1624,6 @@ Suggests: dballe,
geonetwork,
gerris,
gnudatalanguage,
- ncl-ncarg,
octave-octcdf,
paraview,
python-cfgrib,
@@ -1661,6 +1661,7 @@ Recommends: fftw-dev,
liblapack-dev,
liblapack-doc,
libmagics++-dev,
+ libncarg-bin,
libnetcdf-dev,
liboasis3-dev,
libproj-dev,
@@ -1682,7 +1683,6 @@ Suggests: gfortran,
libcblas-dev,
libfeel++-dev,
liblas-dev,
- libncarg-bin,
libopenturns-dev,
librsl-dev,
mpi-defaults-dev,
@@ -1710,12 +1710,15 @@ Recommends: abinit,
cadabra,
cbflib-bin,
cod-tools,
+ cp2k,
drawxtl,
etsf-io,
feynmf,
fityk,
garlic,
+ gdis,
ggobi,
+ ghemical,
gnuplot,
gpaw,
gperiodic,
@@ -1727,6 +1730,7 @@ Recommends: abinit,
liblapack3,
libssm-bin,
mayavi2,
+ mpqc,
nco,
ncview,
netcdf-bin,
@@ -1737,6 +1741,7 @@ Recommends: abinit,
python3-scipy,
python3-sympy,
pyxplot,
+ quantum-espresso,
sasview,
science-numericalcomputation,
scilab,
@@ -1746,7 +1751,6 @@ Suggests: ape,
atompaw,
axiom,
bigdft,
- cp2k,
dx,
dx-doc,
dxsamples,
@@ -1754,8 +1758,6 @@ Suggests: ape,
extrema,
fdmnes,
feel++-apps,
- gdis,
- ghemical,
gpiv,
gpivtools,
hdf5-helpers,
@@ -1764,7 +1766,6 @@ Suggests: ape,
libgsl0ldbl,
liblevmar-2-6,
maxima,
- mpqc,
netcdf-doc,
octaviz,
octopus,
@@ -1773,7 +1774,6 @@ Suggests: ape,
pymca,
python3-pygraphviz,
qtiplot,
- quantum-espresso,
scidavis,
science-mathematics,
science-statistics,
@@ -1824,6 +1824,7 @@ Recommends: abinit-doc,
liboce-visualization-dev,
libopenmpi-dev | libmpich-dev,
libscalapack-mpi-dev,
+ libsis-jhdf5-java,
libssm-dev,
libsymspg-dev,
libxc-dev,
@@ -1848,7 +1849,6 @@ Suggests: gsl-doc-info,
libroot-math-mlp-dev,
libroot-montecarlo-vmc-dev,
libroot-tmva-dev,
- libsis-jhdf5-java,
oce-draw,
python3-h5py,
python3-netcdf4,
@@ -1929,13 +1929,13 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: neuron
+Recommends: neuron,
+ python3-brian
Suggests: cnrun,
invt,
moose,
nest,
pcsim,
- python3-brian,
xppaut
Description: Debian Science packages for modeling of neural systems
This metapackage will install Debian packages which might be useful for
@@ -1957,6 +1957,7 @@ Depends: ${misc:Depends},
science-tasks (= ${source:Version})
Recommends: admesh,
algotutor,
+ calculix-ccx,
calculix-cgx,
coinor-cbc,
coinor-clp,
@@ -1965,6 +1966,7 @@ Recommends: admesh,
gnudatalanguage,
iep,
ipython3,
+ julia,
lammps,
libadolc-dev,
libceres-dev,
@@ -1975,6 +1977,7 @@ Recommends: admesh,
libqsopt-ex-dev,
librsb-dev,
libsuitesparse-dev,
+ libsundials-dev,
liggghts,
metis,
octave,
@@ -2004,8 +2007,7 @@ Recommends: admesh,
vitables,
yade,
yorick
-Suggests: calculix-ccx,
- calculix-ccx-doc,
+Suggests: calculix-ccx-doc,
calculix-ccx-test,
calculix-cgx-examples,
ceres-solver-doc,
@@ -2015,7 +2017,6 @@ Suggests: calculix-ccx,
freemat,
geneva,
hpcc,
- julia,
libarrayfire-unified-dev,
libcblas-dev,
libclblas-dev,
@@ -2027,7 +2028,6 @@ Suggests: calculix-ccx,
libquantum-dev,
libscirenderer-java,
libsuitesparse-metis-dev,
- libsundials-dev,
matlab-support,
metis-edf,
python3-agate,
@@ -2069,9 +2069,10 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: abinit | psi3,
+Recommends: abinit | mpqc | psi3,
axiom,
cadabra,
+ cp2k,
drawxtl,
etsf-io,
feynmf,
@@ -2089,6 +2090,7 @@ Recommends: abinit | psi3,
pymca,
python3-deap,
python3-sympy,
+ quantum-espresso,
science-electronics,
science-numericalcomputation,
toulbar2,
@@ -2096,7 +2098,6 @@ Recommends: abinit | psi3,
Suggests: blzpack,
cernlib,
clhep,
- cp2k,
espresso++,
evolver-ogl | evolver-nox,
fdmnes,
@@ -2110,13 +2111,12 @@ Suggests: blzpack,
libroot-math-mlp-dev,
libroot-montecarlo-vmc-dev,
libroot-tmva-dev,
- mpqc | openmx,
octaviz,
openctm-tools,
+ openmx,
paw,
paw++,
paw-demos,
- quantum-espresso,
root-system,
science-mathematics,
science-statistics,
@@ -2152,12 +2152,12 @@ Recommends: fenics,
python3-multipletau,
python3-pygalmesh,
python3-pynfft,
+ python3-pyode,
python3-quantities,
sfftw-dev,
trilinos-all-dev
Suggests: libfeel++-dev,
- libtriangle-dev,
- python3-pyode
+ libtriangle-dev
Description: Debian Science Physics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
@@ -2170,11 +2170,11 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: pdf-presenter-console,
+Recommends: dspdfviewer,
+ pdf-presenter-console,
texlive-latex-extra,
texlive-publishers,
zathura
-Suggests: dspdfviewer
Description: Debian Science generic tools for presentations
This metapackage will install Debian Science some packages which are
useful for doing presentations for instance on scientific conferences.
@@ -2276,6 +2276,7 @@ Recommends: libapriltag-dev,
liborocos-bfl-dev,
liborocos-kdl-dev,
libpcl-dev,
+ librobottestingframework-dev,
librosconsole-dev,
libsimbody-dev,
libslicot-dev,
@@ -2296,7 +2297,6 @@ Suggests: libcnoid-dev,
libcv-dev,
libignition-math2-dev,
libroboptim-core-dev,
- librobottestingframework-dev,
libsdformat4-dev,
visp-images-data
Description: Debian Robotics development packages
@@ -2310,9 +2310,11 @@ Architecture: all
Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
-Recommends: calculix-cgx,
+Recommends: calculix-ccx,
+ calculix-cgx,
esys-particle,
gazebo9,
+ getdp,
lammps,
libceres-dev,
liggghts,
@@ -2321,19 +2323,18 @@ Recommends: calculix-cgx,
occt-draw,
occt-misc,
openfoam,
+ pysph-viewer,
python3-deap,
python3-escript | python3-escript-mpi,
python3-pysph,
python3-sfepy,
sumo,
yade
-Suggests: calculix-ccx,
- calculix-ccx-doc,
+Suggests: calculix-ccx-doc,
calculix-ccx-test,
calculix-cgx-examples,
ceres-solver-doc,
fdmnes,
- getdp,
libgismo-dev,
libkim-api-v2-models,
libopensurgsim-dev,
@@ -2557,6 +2558,7 @@ Recommends: biber,
python3-pybtex-docutils,
python3-sphinxcontrib.bibtex,
r-cran-knitr,
+ sagetex,
sketch,
texlive,
texlive-bibtex-extra,
@@ -2581,7 +2583,6 @@ Suggests: bibus,
r-cran-shape,
r-cran-xtable,
referencer,
- sagetex,
svgtoipe,
tellico,
texlive-math-extra,
@@ -2750,7 +2751,8 @@ Recommends: coop-computing-tools,
make,
snakemake,
toil
-Suggests: libbenchmark-tools,
+Suggests: cwlformat,
+ libbenchmark-tools,
pegasus-wms
Description: workflow management systems useful for scientific research
This task lists some packages providing workflow management
=====================================
debian/control.stub
=====================================
@@ -5,7 +5,7 @@ Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.
Uploaders: Andreas Tille <tille at debian.org>,
Ole Streicher <olebole at debian.org>
Build-Depends-Indep: blends-dev (>= 0.7~)
-Build-Deoends: debhelper-compat (= 13)
+Build-Deoends: debhelper (>= 13)
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/blends-team/science
Vcs-Git: https://salsa.debian.org/blends-team/science.git
View it on GitLab: https://salsa.debian.org/blends-team/science/-/compare/61f004c50ceda420da55c325d970a8362938462d...77d2115b2e8b20a2febdd32a094918bd97c6cce2
--
View it on GitLab: https://salsa.debian.org/blends-team/science/-/compare/61f004c50ceda420da55c325d970a8362938462d...77d2115b2e8b20a2febdd32a094918bd97c6cce2
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