[Blends-commit] [Git][blends-team/med][master] 2 commits: dindel and seqan-dev are to be removed from Debian

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
fd7676dd by Michael R. Crusoe at 2021-01-22T16:29:08+01:00
dindel and seqan-dev are to be removed from Debian

- - - - -
0eec14bb by Andreas Tille at 2021-01-22T17:50:49+00:00
Merge branch 'master' into 'master'

dindel and seqan-dev are to be removed from Debian

See merge request blends-team/med!6
- - - - -


4 changed files:

- debian/control
- tasks/bio
- tasks/bio-dev
- tasks/bio-ngs


Changes:

=====================================
debian/control
=====================================
@@ -196,7 +196,6 @@ Recommends: abacas,
             dialign,
             dialign-tx,
             diamond-aligner,
-            dindel,
             discosnp,
             disulfinder,
             dnaclust,
@@ -1229,7 +1228,6 @@ Recommends: bio-tradis,
             ruby-bio,
             ruby-crb-blast,
             sbmltoolbox,
-            seqan-dev,
             snakemake,
             toil
 Suggests: bioclipse,


=====================================
tasks/bio
=====================================
@@ -623,8 +623,6 @@ Remark: There is no intend to keep continue the existing packaging since
 
 Recommends: dendroscope
 
-Recommends: dindel
-
 Recommends: drop-seq-tools
 
 Recommends: dwgsim


=====================================
tasks/bio-dev
=====================================
@@ -93,7 +93,7 @@ Recommends: librcsb-core-wrapper0-dev
 
 Recommends: libsbml5-dev, sbmltoolbox
 
-Recommends: seqan-dev, libseqan2-dev, libseqan3-dev
+Recommends: libseqan2-dev, libseqan3-dev
 
 Recommends: libbio-mage-utils-perl
 


=====================================
tasks/bio-ngs
=====================================
@@ -92,8 +92,6 @@ Recommends: cutadapt
 
 Recommends: deepnano
 
-Recommends: dindel
-
 Recommends: discosnp
 
 Recommends: dnaclust
@@ -245,8 +243,6 @@ Recommends: scoary
 
 Recommends: umap
 
-Recommends: dindel
-
 Recommends: mosaik-aligner
 
 Recommends: r-cran-tcr, r-cran-tigger, r-cran-alakazam, r-cran-shazam, igor,



View it on GitLab: https://salsa.debian.org/blends-team/med/-/compare/41fc17eb82a2fa28f954be29e449c5cb22211138...0eec14bb7e581e49adfe490345303da0731b07d0

-- 
View it on GitLab: https://salsa.debian.org/blends-team/med/-/compare/41fc17eb82a2fa28f954be29e449c5cb22211138...0eec14bb7e581e49adfe490345303da0731b07d0
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