[Blends-commit] [Git][blends-team/science][master] 3 commits: Re-render metapackages according the package pool in bullseye
Andreas Tille (@tille)
gitlab at salsa.debian.org
Tue May 11 13:54:31 BST 2021
Andreas Tille pushed to branch master at Debian Blends Team / science
Commits:
5a4fed82 by Andreas Tille at 2021-05-10T15:16:15+02:00
Re-render metapackages according the package pool in bullseye
- - - - -
55e6c597 by Andreas Tille at 2021-05-10T15:27:10+02:00
Generate automatic changelog
- - - - -
da124f2d by Andreas Tille at 2021-05-10T15:44:44+02:00
Upload to unstable
- - - - -
4 changed files:
- debian/changelog
- debian/control
- + dependency_data/debian-science_1.14.1.json
- + dependency_data/debian-science_1.14.2.json
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,23 @@
+debian-science (1.14.2) unstable; urgency=medium
+
+ * Re-render metapackages according the package pool in bullseye
+
+ * start of automatic changelog entry *
+
+ * Changes in metapackage dependencies
+ -science-dataacquisition-dev
+ added:
+ Recommends: libopenrefine-vicino-java, libopenrefine-arithcode-java
+ -science-simulations
+ added:
+ Recommends: pysph-viewer
+ -science-workflow
+ added:
+ Recommends: python3-nipype, python3-wdlparse
+ Suggests: cwlformat
+
+ -- Andreas Tille <tille at debian.org> Mon, 10 May 2021 15:27:28 +0200
+
debian-science (1.14.1) unstable; urgency=medium
* Source-only upload
=====================================
debian/control
=====================================
@@ -230,7 +230,8 @@ Recommends: adun.app,
tandem-mass,
v-sim,
xbs,
- xdrawchem
+ xdrawchem,
+ xmakemol-gl | xmakemol
Suggests: bkchem,
fdmnes,
gcu-plugin,
@@ -246,8 +247,7 @@ Suggests: bkchem,
python-pymzml-doc,
python3-periodictable,
tinker,
- viewmol,
- xmakemol-gl | xmakemol
+ viewmol
Description: Debian Science Chemistry packages
This metapackage will install Debian Science packages related to
Chemistry. You might also be interested in the field::chemistry
@@ -317,12 +317,14 @@ Recommends: libgetdata-dev,
python3-aws-xray-sdk,
python3-csvkit,
python3-guidata,
- python3-intake,
python3-pygetdata,
python3-pymeasure,
python3-segyio,
python3-xrayutilities
Suggests: libnarval1-dev,
+ libopenrefine-arithcode-java,
+ libopenrefine-vicino-java,
+ python3-intake,
r-cran-mi,
r-cran-ncdf4
Description: Debian Science data acquisition development packages
@@ -351,6 +353,10 @@ Depends: ${misc:Depends},
science-config (= ${source:Version}),
science-tasks (= ${source:Version})
Recommends: environment-modules,
+ gridengine-client,
+ gridengine-exec,
+ gridengine-master,
+ gridengine-qmon,
ipython3,
mpich,
openmpi-bin,
@@ -358,10 +364,6 @@ Recommends: environment-modules,
Suggests: coop-computing-tools,
dmtcp,
globus-core,
- gridengine-client,
- gridengine-exec,
- gridengine-master,
- gridengine-qmon,
hpcc,
htcondor,
mpich2python,
@@ -1811,7 +1813,6 @@ Recommends: abinit-doc,
libccp4-dev,
libcexceptions-dev,
libclipper-dev,
- libcod-precision-perl,
libetsf-io-dev,
libetsf-io-doc,
libfftw3-dev,
@@ -1843,6 +1844,7 @@ Suggests: gsl-doc-info,
gsl-doc-pdf,
gsl-ref-html | gsl-ref-psdoc,
libcblas-dev,
+ libcod-precision-perl,
libfeel++-dev,
libfftw3-doc,
libpspio-dev,
@@ -1964,7 +1966,6 @@ Recommends: admesh,
coinor-symphony,
esys-particle,
gnudatalanguage,
- iep,
ipython3,
julia,
lammps,
@@ -2017,6 +2018,7 @@ Suggests: calculix-ccx-doc,
freemat,
geneva,
hpcc,
+ iep,
libarrayfire-unified-dev,
libcblas-dev,
libclblas-dev,
@@ -2749,6 +2751,8 @@ Recommends: coop-computing-tools,
gearman,
gearman-tools,
make,
+ python3-nipype,
+ python3-wdlparse,
snakemake,
toil
Suggests: cwlformat,
=====================================
dependency_data/debian-science_1.14.1.json
=====================================
@@ -0,0 +1 @@
+debian-science_1.14.json
\ No newline at end of file
=====================================
dependency_data/debian-science_1.14.2.json
=====================================
@@ -0,0 +1 @@
+{"geography": {"depends": [], "suggests": ["googleearth-package", "sumo", "libmseed-dev", "python3-pyepsg"], "recommends": ["gis-workstation", "grass", "qgis", "qgis-plugin-grass", "proj-bin", "mapserver-bin", "gmt", "gpsbabel", "gpx2shp", "gpsd", "gpsdrive", "gpsman", "earth3d", "openscenegraph", "drawmap", "gpstrans", "geoip-bin", "gpsd-clients", "grass-doc", "python3-mapscript", "phppgadmin", "gpsmanshp", "viking", "avce00", "e00compr", "gdal-bin", "ogdi-bin", "postgis", "osm2pgsql", "josm", "gosmore", "python3-mapnik", "mapnik-utils", "osmpbf-bin", "hyantesite", "r-cran-sp", "r-cran-maptools", "r-cran-mapdata", "r-cran-mapproj", "r-cran-maps", "r-cran-fields", "r-cran-raster", "pgadmin3", "openjump", "grace", "hydroffice.bag-tools", "python3-cartopy", "sac2mseed"], "ignore": [], "avoid": []}, "dataacquisition": {"depends": [], "suggests": ["gnudatalanguage", "comedi-source", "rtai", "xenomai-runtime", "linux-image-2.6-rt", "rt-tests", "gpsd", "binoculars", "python3-streamz", "tango-db", "tango-starter", "tango-accesscontrol", "python3-pytango", "python3-taurus", "hart"], "recommends": ["engauge-digitizer", "qtdmm", "g3data", "ktimetrace", "netcdf-bin", "libgetdata-tools", "jaaa", "ghkl", "narval-utils", "xyscan", "filo", "segyio-bin", "clickhouse-tools", "csvkit", "lxi-tools", "xlsx2csv", "python3-pyvisa", "mx-dataacquisition", "epics", "plot-digitizer", "libfreenect-dev", "opendap"], "ignore": [], "avoid": []}, "workflow": {"depends": [], "suggests": ["cwlformat", "libbenchmark-tools"], "recommends": ["make", "pegasus-wms", "snakemake", "cwltool", "coop-computing-tools", "python3-nipype", "gearman", "gearman-tools", "toil", "python3-wdlparse"], "ignore": [], "avoid": []}, "logic": {"depends": [], "suggests": ["coinor-libcoinmp-dev"], "recommends": ["agda", "coq", "hol-light", "hol88", "matita", "proofgeneral", "why", "why3", "depqbf", "picosat", "sat4j", "alt-ergo", "boolector", "cvc3", "cvc4", "z3", "prover9", "mace2", "maude", "spass", "coinor-cbc", "coinor-symphony", "minisat+", "clasp", "coala", "gringo", "lbt", "maria", "mona", "toulbar2"], "ignore": [], "avoid": []}, "meteorology": {"depends": [], "suggests": ["paraview", "geonetwork", "gnudatalanguage", "r-base", "octave-octcdf", "gerris", "python3-openturns"], "recommends": ["libemos-bin", "cdo", "nco", "dballe", "xygrib", "metview", "ncview", "grads", "ferret-vis", "cdftools", "fcm", "makedepf90", "flextra", "flexpart", "magics++", "cylc", "libeccodes-tools", "ecaccess", "ncl-ncarg", "harp", "python-cfgrib", "python3-cdo", "python3-netcdf4", "python3-grib", "python3-eccodes", "python3-drslib", "python3-metaconfig", "python3-gsw", "python3-iapws", "python3-gsw", "python3-iapws", "python3-cmor", "python3-ferret", "python3-sphere", "cmor-tables", "libdap-bin", "libdap-doc", "vistrails", "coda", "sasview", "gwyddion"], "ignore": [], "avoid": []}, "typesetting": {"depends": [], "suggests": ["tellico", "openoffice.org-dmaths", "r-cran-xtable", "r-cran-gridbase", "r-cran-highr", "r-cran-scatterd3", "r-cran-shape", "csv2latex", "libgtkmathview-bin", "svgtoipe", "xul-ext-zotero", "pymarc", "luasseq", "libqtexengine-dev"], "recommends": ["referencer", "kbibtex", "impose+", "pybliographer", "texlive-bibtex-extra", "jabref", "bibutils", "biber", "feynmf", "texlive", "texlive-science", "texlive-publishers", "texlive-math-extra", "diploma", "xfig", "transfig", "dia", "texmaker | kile | lyx | texmacs | auctex | vim-latexsuite | texstudio", "pandoc", "pandoc-citeproc", "r-cran-knitr", "bibus", "mlpost", "latexdiff", "libjlatexmath-java", "cb2bib", "jeuclid-mathviewer", "sketch", "ipe", "ipe5toxml", "quaneko", "gpapers", "zotero-standalone", "gummi", "sagetex", "pybtex", "python3-sphinxcontrib.bibtex", "python3-pybtex-docutils"], "ignore": [], "avoid": []}, "robotics": {"depends": [], "suggests": ["arduino-mk", "joint-state-publisher-gui", "ompl-demos", "libcoin-runtime", "vtk7", "octave", "gnuplot"], "recommends": ["rtai", "xenomai-runtime", "morse-simulator", "choreonoid", "liburdfdom-tools", "solid", "robot-player", "d-collide", "rtnet", "orca", "roboop", "orocos-rtt", "orocos-ocl", "ros-desktop-full", "ros-desktop", "ros-perception", "ros-simulators", "ros-robot", "ros-robot-state-publisher", "rosdiagnostic", "joint-state-publisher", "ros-opencv-apps", "openrtm", "openhrp", "gazebo9", "openrave", "octomap-tools", "octovis", "aseba"], "ignore": [], "avoid": []}, "engineering-dev": {"depends": [], "suggests": ["libgtkdatabox-dev", "libgtkdataboxmm-dev", "libqwt-dev | libqwt5-qt4-dev", "openturns-examples", "libdiet-sed2.8-dev", "libdiet-client2.8-dev", "libdiet-dagda2.8-dev", "libdiet-admin2.8-dev", "ceres-solver-doc"], "recommends": ["libalberta-dev", "code-saturne-bin", "code-saturne-include", "libcgns-dev", "libitpp-dev", "libadios-dev", "libbox-dev", "libsilo-dev", "libxdmf-dev", "libgetfem++-dev", "libhdf5-serial-dev", "libjhdf5-java", "libjhdf4-java", "libsis-jhdf5-java", "pycgns", "liboce-visualization-dev", "liboce-ocaf-dev", "libdeal.ii-dev", "libfeel++-dev", "libluminate-dev", "libopenturns-dev", "libmadlib-dev", "libtet1.4-dev", "libslepc3.4.2-dev", "libelmer-dev", "libug-dev", "libmed-dev", "libmedc-dev", "libmedimport-dev", "libnetcdf-dev", "python3-netcdf4", "r-cran-rnetcdf", "libnfft3-dev", "libnlopt-dev", "libcoin-dev", "libmetis-edf-dev", "libslicot-dev", "python3-collada", "libann-dev", "libflann-dev", "libdime-dev", "libdxflib-dev", "salome-kernel-dev", "python3-pynfft", "libplb-dev", "libceres-dev", "trilinos-all-dev", "libp4est-dev", "libgismo-dev", "python3-pygalmesh", "python3-fluids", "liblxi-dev", "python3-pyode"], "ignore": [], "avoid": []}, "highenergy-physics": {"depends": [], "suggests": ["paw-demos", "geant321-doc", "lhapdf-pdfsets-minimal", "root-system-doc"], "recommends": ["cernlib", "cernlib-base", "cernlib-core", "cernlib-extras", "dzedit", "kuipc", "kxterm", "nypatchy", "pawserv", "zftp", "paw", "paw++", "cernlib-montecarlo", "geant321", "feynmf", "looptools", "octave-lhapdf", "root-macro-fastjet", "pythia8-root-interface", "libroot-bindings-python5.34", "libroot-bindings-ruby5.34", "libroot-graf3d-gl5.34", "libroot-io-xmlparser5.34", "libroot-math-mathmore5.34", "libroot-math-unuran5.34", "libroot-misc-memstat5.34", "libroot-misc-table5.34", "libroot-net-bonjour5.34", "libroot-net-ldap5.34", "libroot-proof-clarens5.34", "libroot-roofit5.34", "libroot-geom5.34", "libroot-graf2d-gpad5.34", "libroot-graf2d-graf5.34", "libroot-graf2d-postscript5.34", "libroot-graf3d-eve5.34", "libroot-graf3d-g3d5.34", "libroot-gui5.34", "libroot-gui-ged5.34", "libroot-hist5.34", "libroot-hist-spectrum5.34", "libroot-html5.34", "libroot-io5.34", "libroot-math-foam5.34", "libroot-math-genvector5.34", "libroot-math-mathcore5.34", "libroot-math-matrix5.34", "libroot-math-minuit5.34", "libroot-math-mlp5.34", "libroot-math-physics5.34", "libroot-math-quadp5.34", "libroot-math-smatrix5.34", "libroot-math-splot5.34", "libroot-misc-minicern5.34", "libroot-montecarlo-eg5.34", "libroot-montecarlo-vmc5.34", "libroot-net5.34", "libroot-net-auth5.34", "libroot-proof5.34", "libroot-proof-proofplayer5.34", "libroot-tmva5.34", "libroot-tree5.34", "libroot-tree-treeplayer5.34", "libroot-core5.34", "root-plugin-graf2d-asimage", "root-plugin-geom-gdml", "root-plugin-gui-qt", "root-plugin-graf2d-qt", "root-plugin-math-fftw3", "root-plugin-math-minuit2", "root-plugin-montecarlo-pythia8", "root-plugin-net-globus", "root-plugin-net-krb5", "root-plugin-proof-peac", "root-plugin-sql-mysql", "root-plugin-sql-odbc", "root-plugin-sql-pgsql", "root-plugin-geom-geombuilder", "root-plugin-geom-geompainter", "root-plugin-graf2d-x11", "root-plugin-graf3d-x3d", "root-plugin-gui-fitpanel", "root-plugin-gui-guibuilder", "root-plugin-gui-sessionviewer", "root-plugin-hist-hbook", "root-plugin-hist-histpainter", "root-plugin-hist-spectrumpainter", "root-plugin-io-sql", "root-plugin-io-xml", "root-plugin-math-fumili", "root-plugin-tree-treeviewer", "root-system-proofd", "root-system-rootd", "root-system-bin", "root-system-common", "root-system", "rivet", "rivet-plugins", "rivet-root-converter", "thepeg", "thepeg-gui", "herwig++", "geant4", "neuron"], "ignore": [], "avoid": []}, "viewing-dev": {"depends": [], "suggests": ["libcollada-dom2.4-dp-dev"], "recommends": ["pdl", "gnudatalanguage", "libgrits-dev", "python3-matplotlib", "libgnuplot-iostream-dev", "libqglviewer-dev", "python3-gnuplot", "python3-gnuplotlib", "libcoin-dev", "libsoqt520-dev", "libvtk7-qt-dev", "libvtk7-dev", "tcl-vtk7", "python3-vtk7", "libvtk7-java", "vtk7-examples", "python3-pivy", "libgtkdataboxmm-dev", "libgtkdatabox-dev", "inventor-dev", "libqtexengine-dev", "libqwtplot3d-qt5-dev", "python3-qwt3d-qt5", "python3-qwt", "libchealpix-dev", "python3-skimage", "python3-skimage-lib", "python3-matplotlib-venn", "libplplot-dev", "python3-plplot-qt", "libglm-dev", "libglbinding-dev", "libforge-dev", "libgli-dev", "libglobjects-dev", "libslvs1-dev", "libgts-dev", "python3-vispy", "libgl2ps-dev", "libqglviewer-dev-qt5", "python3-qwt", "liborigin2-dev"], "ignore": [], "avoid": []}, "geometry": {"depends": [], "suggests": ["libcgal-dev", "libgeometry-primitive-perl", "libmath-geometry-voronoi-perl", "octave-geometry", "rubiks", "libgismo-dev"], "recommends": ["carmetal", "salome-geom", "drgeo", "geogebra-kde"], "ignore": [], "avoid": []}, "economics": {"depends": [], "suggests": ["elpa-ess", "dynare-matlab", "x13as", "science-mathematics", "science-numericalcomputation", "science-statistics", "science-social", "science-financial"], "recommends": ["dynare", "gretl", "octave-econometrics", "r-base", "r-cran-urca", "r-cran-bayesm", "r-cran-foreign", "r-cran-hmisc", "r-cran-tseries", "r-cran-mfilter", "r-cran-lme4", "r-cran-mcmcpack", "r-cran-fimport", "r-cran-fnonlinear", "r-cran-funitroots", "r-cran-gmm", "r-cran-wdi", "r-cran-pwt", "r-cran-pwt8", "r-cran-pwt9", "r-cran-rsdmx", "r-cran-isocodes", "r-cran-dynlm", "r-cran-aer", "r-cran-plm", "r-cran-rdbnomics", "python3-statsmodels", "dolo", "recs", "python3-quantecon", "r-cran-ecdat", "r-other-bmr", "minsky", "r-cran-vars", "r-other-gecon", "netlogo", "r-cran-pdfetch", "pksfc", "repast-symphony", "repast-hpc", "python3-pandasdmx"], "ignore": [], "avoid": []}, "physics-dev": {"depends": [], "suggests": ["libtriangle-dev"], "recommends": ["pyfai", "libnfft3-dev", "libfftw3-dev", "fftw-dev", "sfftw-dev", "python3-gpyfft", "libopenctm-dev", "python3-quantities", "python3-multipletau", "python3-pynfft", "libfeel++-dev", "libplb-dev", "libasl-dev", "trilinos-all-dev", "libdeal.ii-dev", "libp4est-dev", "fenics", "python3-dolfin", "python3-ltfatpy", "python3-pygalmesh", "libxray-absorption-perl", "libxray-scattering-perl", "libxray-spacegroup-perl", "python3-pyode"], "ignore": [], "avoid": []}, "viewing": {"depends": [], "suggests": ["libgrits-dev", "worldwind", "med-imaging", "libgtkmathview-bin", "jeuclid-mathviewer", "texlive-pictures", "pgplot5", "r-cran-plotrix", "r-cran-colorspace", "r-cran-labeling", "r-cran-scales", "r-cran-ggplot2", "r-cran-scatterplot3d", "r-cran-vioplot", "r-cran-shape", "r-cran-qqman", "r-cran-aplpack", "r-cran-aplpack", "findimagedupes", "libpuzzle-bin", "python3-matplotlib", "circos", "circos-tools", "libqglviewer-dev", "libcoin-dev", "libsoqt520-dev", "libvtk7-dev", "libvtk7-qt-dev", "tcl-vtk7", "python3-vtk7", "libvtk7-java", "vtk7-examples", "python3-pivy", "libgts-bin"], "recommends": ["vistrails", "pdl", "gnudatalanguage", "kst", "ifrit", "yorick", "fityk", "gnuplot", "grace", "gri", "labplot", "graphviz", "pyxplot", "plotdrop", "qtiplot", "python3-guiqwt", "imview", "mayavi2", "g3data", "gwyddion", "paraview", "visit", "gle-graphics", "gmsh", "giza-dev", "lybniz", "3depict", "mathgl", "udav", "matlab2tikz", "cassandra", "pgfplots", "feedgnuplot", "libgnuplot-iostream-dev", "libqglviewer2", "python3-gnuplot", "ovito", "scidavis", "veusz", "ctioga2", "python3-seaborn", "trend", "python3-pyqtgraph", "rlplot", "solvespace", "gfsview", "r-cran-sjplot", "geg"], "ignore": [], "avoid": []}, "psychophysics": {"depends": [], "suggests": ["science-neuroscience-cognitive", "visionegg", "tscope", "opensesame", "psytoolkit", "debruijn", "psychlops", "pebl"], "recommends": ["psychopy", "octave-psychtoolbox-3", "libfreenect-dev", "nrec"], "ignore": [], "avoid": []}, "imageanalysis-dev": {"depends": [], "suggests": ["libfreeimage-dev", "lib3ds-dev"], "recommends": ["libcv-dev", "cimg-dev", "libsimage-dev", "libvlfeat-dev", "libvisad-java", "libvigraimpex-dev", "python3-imageio", "liblimereg-dev", "libimglib2-java", "python3-meshio"], "ignore": [], "avoid": []}, "highenergy-physics-dev": {"depends": [], "suggests": ["clhep-doc", "hepmc-examples", "hepmc-user-manual", "hepmc-reference-manual", "lhapdf-ccwrap-doc", "siscone-examples", "siscone-doc-html", "siscone-doc-pdf", "fastjet-doc", "fastjet-examples", "pythia8-examples", "pythia8-doc-html", "pythia8-doc-worksheet", "rivet-user-manual", "rivet-reference", "rivet-plugins-doc", "thepeg-reference", "ckon"], "recommends": ["cernlib-base-dev", "cernlib-core-dev", "libclhep-dev", "libhepmc-dev", "libhepmcfio-dev", "liblhapdf-dev", "libsiscone-dev", "libsiscone-spherical-dev", "libfastjet-dev", "libfastjettools-dev", "libfastjet-fortran-dev", "libfastjetplugins-dev", "libpythia8-dev", "libhepmcinterface8-dev", "fcc", "libooptools-dev", "libroot-bindings-python-dev", "libroot-bindings-ruby-dev", "libroot-graf3d-gl-dev", "libroot-io-xmlparser-dev", "libroot-math-mathmore-dev", "libroot-math-unuran-dev", "libroot-misc-memstat-dev", "libroot-misc-table-dev", "libroot-net-bonjour-dev", "libroot-net-ldap-dev", "libroot-proof-clarens-dev", "libroot-roofit-dev", "libroot-geom-dev", "libroot-graf2d-gpad-dev", "libroot-graf2d-graf-dev", "libroot-graf2d-postscript-dev", "libroot-graf3d-eve-dev", "libroot-graf3d-g3d-dev", "libroot-gui-dev", "libroot-gui-ged-dev", "libroot-hist-dev", "libroot-hist-spectrum-dev", "libroot-html-dev", "libroot-io-dev", "libroot-math-foam-dev", "libroot-math-genvector-dev", "libroot-math-mathcore-dev", "libroot-math-matrix-dev", "libroot-math-minuit-dev", "libroot-math-mlp-dev", "libroot-math-physics-dev", "libroot-math-quadp-dev", "libroot-math-smatrix-dev", "libroot-math-splot-dev", "libroot-misc-minicern-dev", "libroot-montecarlo-eg-dev", "libroot-montecarlo-vmc-dev", "libroot-net-dev", "libroot-net-auth-dev", "libroot-proof-dev", "libroot-proof-proofplayer-dev", "libroot-tmva-dev", "libroot-tree-dev", "libroot-tree-treeplayer-dev", "libroot-core-dev", "libroot-static", "librivet-dev", "rivet-plugins-dev", "libthepeg-dev", "herwig++-dev", "neuron-dev", "python3-neuron"], "ignore": [], "avoid": []}, "engineering": {"depends": [], "suggests": ["r-cran-spc", "logcentral", "logcentral-tools", "ann-tools", "salome-kernel", "calculix-ccx-doc", "calculix-ccx-test", "calculix-cgx-examples"], "recommends": ["librecad", "sailcut", "oce-draw", "python3-silo", "libsilo-bin", "gerris", "gmsh", "getdp", "netgen", "z88", "freecad", "feel++-apps", "python3-openturns", "code-aster-gui", "code-aster", "metis-edf", "eficas", "code-saturne", "ecs", "hdfview", "sfc", "cba", "fenics", "python3-dolfin", "python3-fiat", "syrthes", "openfoam", "brlcad", "diet-agent", "tetgen", "dime", "avl", "cgns-convert", "pycgns", "varkon", "tochnog", "salome-gui", "salome-jobmanager", "salome-med", "salome-paravis", "salome-smesh", "salome-yacs", "libadios-bin", "calculix-ccx", "calculix-cgx", "scram", "python3-escript | python3-escript-mpi", "solvespace", "openmeca", "python3-admesh", "lxi-tools"], "ignore": [], "avoid": []}, "distributedcomputing": {"depends": [], "suggests": ["hpcc", "coop-computing-tools", "python3-mpi4py", "psom", "octave-mpi"], "recommends": ["ipython3", "nordugrid-arc-nox", "gridengine-client", "gridengine-exec", "gridengine-master", "gridengine-qmon", "globus-core", "openmpi-bin", "mpich", "openmpipython", "mpich2python", "htcondor", "dmtcp", "environment-modules", "python3-scoop"], "ignore": [], "avoid": []}, "simulations": {"depends": [], "suggests": ["calculix-ccx-doc", "calculix-ccx-test", "calculix-cgx-examples", "libopensurgsim-dev", "ceres-solver-doc", "libgismo-dev"], "recommends": ["sumo", "esys-particle", "lammps", "liggghts", "yade", "python3-deap", "openfoam", "getdp", "fdmnes", "radiance", "music-bin", "calculix-ccx", "calculix-cgx", "neuron", "python3-sfepy", "python3-pysph", "pysph-viewer", "python3-woo", "libceres-dev", "gazebo9", "python3-escript | python3-escript-mpi", "libkim-api-v2-models", "occt-draw", "occt-misc"], "ignore": [], "avoid": []}, "neuroscience-cognitive": {"depends": [], "suggests": ["science-typesetting", "science-psychophysics", "fieldtrip", "eeglab", "debruijn", "freesurfer", "xnat", "pysurfer", "connectomeviewer", "hid"], "recommends": ["psignifit", "amide", "dicomnifti", "minc-tools", "medcon", "xmedcon", "nifti-bin", "python3-nibabel", "python3-pydicom", "fsl", "fslview", "openwalnut-qt4", "nifti2dicom", "qnifti2dicom", "caret", "praat", "slicer", "dicom3tools", "voxbo", "bioimagesuite", "afni", "mni-autoreg", "mni-n3", "brainvisa", "lipsia", "openmeeg-tools", "mricron", "itksnap", "python3-statsmodels", "spm8", "iqr", "mriconvert"], "ignore": [], "avoid": []}, "mathematics-dev": {"depends": [], "suggests": ["libtet1.4.2-dev", "libjlapack-java", "libmtj-java", "libnetlib-java", "libcblas-dev", "libitpp-dev", "libtestu01-0-dev", "sollya", "libsollya-dev", "liblrs-dev", "libtrilinos-dev", "libqrupdate-dev", "openturns-examples", "cfortran", "givaro-dev-doc", "givaro-user-doc", "fflas-ffpack-dev-doc", "fflas-ffpack-user-doc", "libdune-istl-dev", "libdune-localfunctions-dev", "libdune-functions-dev", "libdune-grid-glue-dev", "libdune-pdelab-dev", "libdune-typetree-dev", "libdune-uggrid-dev", "python-numpy-groupies", "jsurf-alggeo", "python3-msgpack-numpy"], "recommends": ["libnglib-dev", "python3-numpy", "python3-numexpr", "libgsl0-dev", "liblapack-dev", "libatlas-base-dev", "libblas-dev", "libopenblas-dev", "libblis-dev", "libsuperlu-dev", "libglpk-dev", "libglpk-java", "libqsopt-ex-dev", "libcgal-dev", "libqhull-dev", "libmatheval-dev", "libmatio-dev", "libblitz0-dev", "libjama-dev", "libtnt-dev", "liblip-dev", "libranlip-dev", "libarpack2-dev", "libarpack++2-dev", "code-saturne-bin", "code-saturne-include", "libarmadillo-dev", "libnauty2-dev", "libstxxl-dev", "libnewmat10-dev", "libmadlib-dev", "libtet1.4-dev", "fenics", "python3-dolfin", "python3-ffc", "python3-ufl", "petsc-dev", "slepc-dev", "python3-petsc4py", "python3-slepc4py", "python3-openturns", "libopenturns-dev", "libqd-dev", "libcvector-dev", "libhypre-dev", "libitsol-dev", "libmuparser-dev", "libsparskit-dev", "libspooles-dev", "libsuitesparse-dev", "libsuitesparse-metis-dev", "libparmetis-dev", "libscythestat-dev", "libfreefem++-dev", "libfreefem-dev", "libgivaro-dev", "fflas-ffpack", "liblevmar-dev", "libpolybori-dev", "libpolybori-groebner-dev", "python3-brial", "libquadrule-dev", "libcdd-dev", "libec-dev", "libecm-dev", "libgf2x-dev", "libiml-dev", "liblfunction-dev", "libfplll-dev", "liblinbox-dev", "liblrcalc-dev", "libm4ri-dev", "libm4rie-dev", "libratpoints-dev", "libtachyon-dev", "libzn-poly-dev", "libpynac-dev", "libsymmetrica2-dev", "libprimesieve-dev", "gap-dev", "libnfft3-dev", "libfftw3-dev", "fftw-dev", "sfftw-dev", "python3-gpyfft", "liblbfgs-dev", "libdogleg-dev", "libigraph0-dev", "libalglib-dev", "libeigen3-dev", "libviennacl-dev", "python3-pyviennacl", "libgnuplot-iostream-dev", "libqcustomplot-dev", "libcneartree-dev", "libmpfrc++-dev", "libmpfi-dev", "libscscp1-dev", "python3-linop", "libcminpack-dev", "minpack-dev", "libdune-grid-dev", "libann-dev", "libflann-dev", "libdouble-conversion-dev", "libfeel++-dev", "python3-pynfft", "libug-dev", "libplb-dev", "libmathicgb-dev", "libfrobby-dev", "libmathic-dev", "python3-dtcwt", "libsopt-dev", "python3-gimmik", "cppad", "libflint-arb-dev", "librw-dev", "trilinos-all-dev", "libdeal.ii-dev", "libp4est-dev", "coinor-libcoinmp-dev", "jel-java", "libjgrapht0.8-java | libjgrapht0.6-java", "python3-ltfatpy", "libparsington-java", "libgismo-dev", "python3-cvxopt", "python3-asteval", "python3-brial", "libbrial-dev", "libcombblas-dev", "libmkl-full-dev", "libcqrlib-dev", "python3-cryptominisat", "python3-cypari2", "libflint-dev", "libgemmlowp-dev", "libbraiding-dev", "libhomfly-dev", "libxsmm-dev", "python3-optlang", "python3-bumps", "libmps-dev", "libsaclib-dev"], "ignore": [], "avoid": []}, "financial": {"depends": [], "suggests": [], "recommends": ["r-cran-fasianoptions", "r-cran-fassets", "r-cran-fbasics", "r-cran-fbonds", "r-cran-fcopulae", "r-cran-fexoticoptions", "r-cran-fextremes", "r-cran-fgarch", "r-cran-fimport", "r-cran-fmultivar", "r-cran-fnonlinear", "r-cran-foptions", "r-cran-fregression", "r-cran-ftrading", "r-cran-funitroots", "r-cran-timedate", "r-cran-timeseries", "r-cran-fportfolio"], "ignore": [], "avoid": []}, "dataacquisition-dev": {"depends": [], "suggests": ["r-cran-ncdf4", "r-cran-mi"], "recommends": ["libnarval1-dev", "libtango-dev", "liblog4tango-dev", "python3-xrayutilities", "libsdsl-dev", "libgetdata-dev", "python3-pygetdata", "libgetdata-perl", "python3-guidata", "python3-segyio", "python3-aws-xray-sdk", "python3-csvkit", "python3-pymeasure", "liblxi-dev", "python3-intake", "libopenrefine-vicino-java", "libopenrefine-arithcode-java"], "ignore": [], "avoid": []}, "statistics": {"depends": [], "suggests": ["r-cran-spc", "r-cran-mlmrev", "r-cran-gnm", "r-cran-brglm", "science-mathematics", "libtamuanova-dev", "r-cran-blockmodeling", "r-cran-catools", "r-cran-fastmatch", "r-cran-futile.logger", "r-cran-futile.options", "r-cran-igraph", "r-cran-lambda.r", "r-cran-magrittr", "r-cran-nnls", "r-cran-r.oo", "r-cran-r.utils", "libapophenia2-dev", "r-cran-bbmle", "r-cran-ellipse", "r-cran-irlba", "r-cran-luminescence", "r-cran-minpack.lm", "r-cran-princurve", "r-cran-rngtools", "node-shiny-server-client"], "recommends": ["elpa-ess", "littler", "r-recommended", "rkward", "r-cran-mapproj", "r-cran-abind", "r-cran-arm", "r-cran-bayesm", "r-cran-boot", "r-cran-cairodevice", "r-cran-ca", "r-cran-car", "r-cran-caret", "r-cran-chron", "r-cran-cluster", "r-cran-coda", "r-cran-codetools", "r-cran-date", "r-cran-dbi", "r-cran-eco", "r-cran-effects", "r-cran-erm", "r-cran-fbasics", "r-cran-fcopulae", "r-cran-fecofin", "r-cran-fextremes", "r-cran-fmultivar", "r-cran-foptions", "r-cran-foreign", "r-cran-fportfolio", "r-cran-gam", "r-cran-gdata", "r-cran-geepack", "r-cran-glmnet", "r-cran-gmodels", "r-cran-goftest", "r-cran-gplots", "r-cran-gregmisc", "r-cran-gtools", "r-cran-hdf5", "r-cran-hmisc", "r-cran-its", "r-cran-kernsmooth", "r-cran-lattice", "r-cran-latticeextra", "r-cran-lavaan", "r-cran-lhs", "r-cran-lme4", "r-cran-lmtest", "r-cran-mapdata", "r-cran-maps", "r-cran-maptree", "r-cran-matchit", "r-cran-matrix", "r-cran-mcmcpack", "r-cran-mgcv", "r-cran-misc3d", "r-cran-modelmetrics", "r-cran-mnp", "r-cran-multcomp", "r-cran-mvtnorm", "r-cran-nlme", "r-cran-pscl", "r-cran-psy", "r-cran-qtl", "r-cran-quadprog", "r-cran-qvcalc", "r-cran-randomfieldsutils", "r-cran-raschsampler", "r-cran-rcmdr", "r-cran-relimp", "r-cran-rggobi", "r-cran-rgl", "r-cran-rgtk2", "r-cran-rmpi", "r-cran-rms", "r-cran-rmysql", "r-cran-rodbc", "r-cran-rpart", "r-cran-rpvm", "r-cran-rquantlib", "r-cran-rserve", "r-cran-rsprng", "r-cran-sandwich", "r-cran-sem", "r-cran-sm", "r-cran-snow", "r-cran-strucchange", "r-cran-survival", "r-cran-timedate", "r-cran-tkrplot", "r-cran-tseries", "r-cran-vgam", "r-cran-mass", "r-cran-xml", "r-cran-zelig", "r-cran-zoo", "r-cran-msm", "r-cran-amore", "r-cran-teachingdemos", "r-cran-expm", "r-cran-ggplot2", "r-cran-reshape2", "psignifit", "python3-scipy", "r-cran-vcd", "r-cran-vcdextra", "r-cran-corpcor", "r-cran-bradleyterry2", "r-cran-estimability", "r-cran-elliptic", "r-cran-logspline", "r-cran-lsmeans", "r-cran-modeltools", "r-cran-rinside", "r-cran-pbapply", "r-cran-pbivnorm", "r-cran-contfrac", "r-cran-desolve", "r-cran-hypergeo", "r-cran-coin", "r-cran-bayesfactor", "r-cran-afex", "r-cran-bms", "r-cran-conting", "r-cran-permute", "python3-statsmodels", "r-cran-spam", "r-cran-spatstat", "r-cran-deldir", "r-cran-fastcluster", "r-cran-statmod", "python3-openturns", "python3-pandas", "r-cran-ecodist", "r-cran-energy", "r-cran-mvnormtest", "r-cran-rsdmx", "r-cran-acepack", "r-cran-fcalendar", "rstudio", "apophenia-bin", "r-cran-nmf", "pspp", "datamash", "python3-bayespy"], "ignore": [], "avoid": []}, "biology": {"depends": [], "suggests": ["med-bio-dev"], "recommends": ["med-bio", "bauble", "genesis", "avida-base", "critterding"], "ignore": [], "avoid": []}, "neuroscience-datasets": {"depends": [], "suggests": [], "recommends": ["mni-icbm152-nlin-2009", "mni-colin27-nifti", "haxby2001-faceobject", "fsl-harvard-oxford-atlases", "fsl-juelich-histological-atlas", "fsl-jhu-dti-whitematter-atlas", "fsl-mni-structural-atlas", "fsl-talairach-daemon-atlas", "fsl-oxford-thalamic-connectivity-atlas", "fsl-bangor-cerebellar-atlas", "mclaren-rhesus-macaque-atlas", "sri24-atlas"], "ignore": [], "avoid": []}, "numericalcomputation": {"depends": [], "suggests": ["python3-bcolz", "scilab-jims", "scilab-metanet", "libscirenderer-java", "hpcc", "libcneartree-dev", "matlab-support", "coinor-libcoinmp-dev", "libquantum-dev", "calculix-ccx-doc", "calculix-ccx-test", "calculix-cgx-examples", "libcblas-dev", "ceres-solver-doc", "theano-doc", "evolver-ogl | evolver-nox", "python3-dbfread", "python3-leather", "python3-agate", "python3-agatedbf", "python3-agateexcel", "python3-agatesql", "python3-spyder-line-profiler", "python3-spyder-memory-profiler", "python3-spyder-unittest", "python3-spyder-reports", "libpsurface-dev", "python3-numcodecs", "python3-zarr", "python3-compyle", "python3-cyarray"], "recommends": ["octave", "python3-matplotlib", "python3-scipy", "ipython3", "python3-numpy", "spyder", "python3-guiqwt", "pdl", "gnudatalanguage", "scilab", "scilab-scimax", "scilab-swt", "scilab-ann", "freemat", "yorick", "r-base", "yade", "liggghts", "esys-particle", "python3-deap", "python3-lmfit", "python3-tables", "vitables", "lammps", "julia", "admesh", "metis", "libsundials-dev", "coinor-symphony", "coinor-cbc", "coinor-clp", "metis-edf", "libsuitesparse-dev", "libsuitesparse-metis-dev", "libdune-grid-dev", "libcolpack-dev", "libadolc-dev", "algotutor", "iep", "calculix-ccx", "calculix-cgx", "python3-sfepy", "python3-bitstring", "easea", "geneva", "libclblas-dev", "libclfft-dev", "python3-pysph", "python3-woo", "libopengm-dev", "libceres-dev", "qsopt-ex", "libqsopt-ex-dev", "libarrayfire-unified-dev", "pyzo", "python3-arrayfire", "libclsparse-dev", "librsb-dev", "libppl-dev", "python3-escript | python3-escript-mpi", "python3-theano", "python3-sparse", "toulbar2", "xtensor-dev", "xtensor-python-dev", "python3-xarray", "python3-pydap", "r-cran-nleqslv", "libgismo-dev", "psurface"], "ignore": [], "avoid": []}, "robotics-dev": {"depends": [], "suggests": ["visp-images-data"], "recommends": ["libcv-dev", "libroboptim-core-dev", "libvisp-dev", "libcnoid-dev", "libode-dev", "libompl-dev", "liboctomap-dev", "libopenigtlink-dev", "liburdfdom-dev", "liburdfdom-headers-dev", "libslicot-dev", "libsdformat4-dev", "libconsole-bridge-dev", "libcomedi-dev", "python3-comedilib", "libccd-dev", "libgazebo9-dev", "libsimbody-dev", "libignition-common-dev", "libignition-cmake-dev", "libignition-transport-dev", "libignition-math2-dev", "libignition-math4-dev", "libignition-msgs-dev", "libignition-fuel-tools1-dev", "libkido-dev", "ros-desktop-full-dev", "ros-desktop-dev", "ros-perception-dev", "ros-simulators-dev", "ros-desktop-full-python-dev", "ros-desktop-full-lisp-dev", "ros-environment", "python3-tf2", "librosconsole-dev", "libkdl-parser-dev", "libpcl-dev", "libapriltag-dev", "libfcl-dev", "liborocos-bfl-dev", "liborocos-kdl-dev", "python3-catkin-lint", "librobottestingframework-dev"], "ignore": [], "avoid": []}, "nanoscale-physics": {"depends": [], "suggests": ["hdf5-helpers", "hdf5-tools", "netcdf-doc", "openmpi-doc | mpich-doc", "axiom", "maxima", "libgraphviz-perl", "python3-pygraphviz", "dx", "dxsamples", "dx-doc", "gpiv", "gpivtools", "feel++-apps", "pymca", "qtiplot", "scidavis", "science-statistics", "science-mathematics"], "recommends": ["abinit", "mpqc", "openmx", "psi3", "quantum-espresso", "drawxtl", "etsf-io", "feynmf", "fityk", "gnuplot", "grace", "libblas3", "liblapack3", "libgsl0ldbl", "gsl-bin", "netcdf-bin", "nco", "ncview", "openmpi-bin | mpich", "science-numericalcomputation", "avogadro", "garlic", "gdis", "ghemical", "v-sim", "gwyddion", "cadabra", "extrema", "ggobi", "mayavi2", "udav", "gperiodic", "graphviz", "python3-scipy", "python3-sympy", "pyxplot", "octave", "scilab", "cbflib-bin", "python3-lmfit", "binoculars", "cod-tools", "libssm-bin", "ape", "atompaw", "bigdft", "cp2k", "exciting", "gpaw", "octopus", "ase", "wannier90-1", "wannier90-2", "octaviz", "fdmnes", "liblevmar-2-6", "sasview"], "ignore": [], "avoid": []}, "meteorology-dev": {"depends": [], "suggests": ["udunits-bin", "libcblas-dev", "gfortran", "ksh", "pkg-config", "openturns-examples", "libfeel++-dev", "python3-coards"], "recommends": ["libemos-dev", "mpi-defaults-dev", "libcoarrays-dev", "libgadap-dev", "libcmor-dev", "libcdi-dev", "libeccodes-dev", "libeccodes-tools", "libgrib2c-dev", "libhe5-hdfeos-dev", "libhdfeos-dev", "libproj-dev", "libgctp-dev", "libnetcdf-dev", "netcdf-bin", "r-cran-rnetcdf", "liblapack-dev", "libblas-dev", "libfftw3-dev", "fftw-dev", "sfftw-dev", "python3-gpyfft", "liblapack-doc", "libfftw3-doc", "liblas-dev", "libsphere-dev", "libterralib-dev", "libmagics++-dev", "libaec-dev", "liboasis3-dev", "libudunits2-dev", "libdap-dev", "libncarg-bin", "python3-openturns", "libopenturns-dev", "wcslib-dev", "wcslib-doc", "librsl-dev", "libwreport-dev", "python3-ulmo", "libcoda-dev", "libcoda-java", "python3-coda", "python3-sasmodels"], "ignore": [], "avoid": []}, "tools": {"depends": [], "suggests": ["libmrmpi-dev", "libmemtailor-dev", "python3-pydap", "python3-pweave"], "recommends": ["openstereogram", "xoscope", "python3-h5py", "python3-hdf5storage", "science-workflow", "hdf-compass", "python3-pybind11", "python3-h5netcdf", "reprozip", "reprounzip"], "ignore": [], "avoid": []}, "physics": {"depends": [], "suggests": ["paw-demos", "science-statistics", "science-mathematics", "openctm-tools", "feel++-apps", "evolver-ogl | evolver-nox"], "recommends": ["cernlib", "geant321", "paw++", "paw", "gpaw", "clhep", "geant4", "abinit | mpqc | openmx | psi3", "gerris", "feynmf", "openfoam", "fityk", "tessa | tessa-mpi", "science-numericalcomputation", "oce-draw", "science-electronics", "v-sim", "gpiv", "gpivtools", "maxima", "python3-sympy", "axiom", "meshlab", "cadabra", "drawxtl", "opticalraytracer", "ghkl", "python3-deap", "etsf-io", "pymca", "quantum-espresso", "gwyddion", "blzpack", "gate", "jfreemesh", "spis", "espresso++", "cp2k", "octaviz", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "fdmnes", "pyfr", "toulbar2"], "ignore": [], "avoid": []}, "datamanagement": {"depends": [], "suggests": [], "recommends": ["git-annex", "datalad", "datalad-container"], "ignore": [], "avoid": []}, "bci": {"depends": [], "suggests": ["pyff", "pybci", "bcpy2000", "bci2000", "emokit", "openvibe"], "recommends": [], "ignore": [], "avoid": []}, "imageanalysis": {"depends": [], "suggests": [], "recommends": ["gpivtools", "gpiv", "gwyddion", "teem-apps", "limereg"], "ignore": [], "avoid": []}, "devices": {"depends": [], "suggests": ["libticables-dev", "libticalcs-dev", "libticonv-dev", "libtifiles-dev"], "recommends": ["expeyes", "gfm", "tiemu", "tilem", "tilp2", "bossa", "bossa-cli"], "ignore": [], "avoid": []}, "mathematics": {"depends": [], "suggests": ["gap-online-help", "gap-gapdoc", "gap-io", "gap-scscp", "netgen-doc", "r-cran-evd", "sagetex", "matlab-support", "ann-tools", "gmp-ecm", "primesieve", "evolver-ogl | evolver-nox"], "recommends": ["axiom", "ginac-tools", "xmaxima", "wxmaxima", "pari-gp", "pari-extra", "gap", "magnus", "gap-small-groups-extra", "gap-trans-groups", "gap-prim-groups", "gap-small-groups", "gap-table-of-marks", "gap-guava", "gap-character-tables", "gap-float", "gap-design", "gap-factint", "gap-laguna", "gap-sonata", "gap-toric", "gap-openmath", "gap-grape", "gerris", "freefem", "freefem3d", "freefem++", "netgen", "gmsh", "getdp", "coq", "proofgeneral", "proofgeneral-coq", "matita", "agda", "prover9", "hol-light", "minisat", "science-statistics", "geomview", "octave", "xmds", "xmds2", "freemat", "mathomatic", "scilab", "scilab-scimax", "scilab-ann", "regina-normal", "snappea", "lp-solve", "qsopt-ex", "libmatheval1", "mumps-test", "nauty", "geogebra", "lrslib", "fenics", "python3-dolfin", "python3-ffc", "python3-ufl", "kseg", "polylib-utils", "rheolef", "scotch", "isabelle", "bliss", "python3-openturns", "python3-deap", "mcl", "sagemath", "maxima-sage", "sagemath-database-conway-polynomials", "sagemath-database-elliptic-curves", "sagemath-database-graphs", "sagemath-database-mutually-combinatorial-designs", "sagemath-database-polytopes", "python3-sagenb-export", "eclib-tools", "gfan", "lcalc", "fplll-tools", "lrcalc", "palp", "sympow", "tachyon", "4ti2", "normaliz", "surf-alggeo", "graphviz", "singular", "julia", "qhull-bin", "mathicgb", "frobby", "geneagrapher", "planarity", "flintqs", "rubiks", "coinor-csdp", "topcom", "macaulay2", "qepcad", "octaviz", "eprover", "python3-minieigen", "coinor-symphony", "coinor-cbc", "tetgen", "feel++-apps", "auto-07p", "toulbar2", "cohomcalg", "cryptominisat", "form", "xcas", "pyomo", "model-builder"], "ignore": [], "avoid": []}, "neuroscience-modeling": {"depends": [], "suggests": ["moose", "pcsim", "nest", "invt", "xppaut"], "recommends": ["python3-brian", "cnrun", "neuron"], "ignore": [], "avoid": []}, "nanoscale-physics-dev": {"depends": [], "suggests": ["libcblas-dev", "libfftw3-doc", "libfeel++-dev", "oce-draw", "python3-netcdf4", "python3-h5py"], "recommends": ["abinit-doc", "libblas-dev", "liblapack-dev", "liblapack-doc", "libetsf-io-dev", "libetsf-io-doc", "libfftw3-dev", "python3-gpyfft", "libgsl0-dev", "gsl-bin", "gsl-doc-info", "gsl-ref-html | gsl-ref-psdoc", "libnetcdf-dev", "netcdf-doc", "r-cran-rnetcdf", "libhdf5-dev", "libsis-jhdf5-java", "libxc-dev", "libopenmpi-dev | libmpich-dev", "wannier90-1-dev", "gsl-doc-pdf", "libscalapack-mpi-dev", "scalapack-doc", "science-mathematics-dev", "liboce-visualization-dev", "liboce-ocaf-dev", "libpspio-dev", "libsymspg-dev", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "python3-fabio", "libcbf-dev", "pyfai", "libssm-dev", "libclipper-dev", "python3-binoculars", "python3-pycodcif", "libcod-precision-perl", "libcexceptions-dev", "libccp4-dev", "python3-periodictable", "libxc-dev", "python3-sasmodels"], "ignore": [], "avoid": []}, "social": {"depends": [], "suggests": [], "recommends": ["opensesame"], "ignore": [], "avoid": []}, "electrophysiology": {"depends": [], "suggests": ["science-neuroscience-modeling", "science-dataacquisition", "spike", "klustakwik", "neurodata", "qrtailab", "stimfit", "trellis-neuro", "relacs", "chronus", "libbiosig-dev", "nspike", "rtxi", "bluespike", "meabench", "mclust", "neo", "python3-neo", "pymeg", "libxdffileio-dev", "librtfilter-dev", "libeegdev-dev", "libmcpanel-dev", "eegview", "aghermann", "eeglab", "patchclamp", "spykeview"], "recommends": ["openelectrophy", "libgdf-dev", "sigviewer", "libdrawtk-dev"], "ignore": [], "avoid": []}, "chemistry": {"depends": [], "suggests": ["gdpc-examples", "python-pymzml-doc", "python3-periodictable", "libschroedinger-coordgenlibs-dev"], "recommends": ["apbs", "bkchem", "bodr", "libcdk-java", "chemeq", "chemical-mime-data", "chemtool", "easychem", "gabedit", "galculator", "garlic", "gausssum", "gchempaint", "gdis", "ghemical", "gcrystal", "gcu-bin", "gcu-plugin", "gperiodic", "gromacs | gromacs-mpich | gromacs-openmpi", "kalzium", "katomic", "mopac7-bin", "mpqc", "mpqc-support", "openbabel", "psi3", "pymol", "viewmol", "xdrawchem", "xmakemol-gl | xmakemol", "v-sim", "rasmol", "adun.app", "gdpc", "xbs", "gelemental", "avogadro", "gamgi", "msxpertsuite", "drawxtl", "chemical-structures", "openfoam", "pyfai", "libegad", "libint", "molden", "molekel", "tinker", "jmol", "qutemol", "cp2k", "pdb2pqr", "mmass", "mmass-modules", "python3-pymzml", "tandem-mass", "openchrom", "fdmnes"], "ignore": [], "avoid": []}, "presentation": {"depends": [], "suggests": [], "recommends": ["dspdfviewer", "pdf-presenter-console", "zathura", "texlive-latex-extra", "texlive-publishers"], "ignore": [], "avoid": []}, "machine-learning": {"depends": [], "suggests": ["libmkldnn-dev", "science-statistics", "science-numericalcomputation", "libacovea-dev", "science-typesetting", "ask", "libdlib-dev", "python3-hdmedians", "libfclib-dev", "libxsmm-dev"], "recommends": ["gprolog", "yap", "libtorch3-dev", "libshogun-dev", "libfann-dev", "libsvm-dev", "libcomplearn-dev", "libqsearch-dev", "liblinear-dev", "libocas-dev", "python3-sklearn", "python3-mdp", "python3-mlpy", "weka", "vowpal-wabbit", "r-cran-mass", "r-cran-bayesm", "r-cran-class", "r-cran-cluster", "r-cran-msm", "r-cran-mcmcpack", "r-cran-mnp", "r-cran-amore", "r-cran-gbm", "r-cran-tgp", "python3-statsmodels", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "autoclass", "mcl", "scilab-ann", "libga-dev", "libevocosm-dev", "pgapack", "octave-ga", "python3-genetic", "flann", "torch-core-free", "lua-torch-nn", "lua-torch-nngraph", "lua-torch-xlua", "lua-torch-trepl", "lua-torch-graph", "lua-torch-optim", "lua-torch-image", "libcv-dev", "python3-opencv", "libvigraimpex-dev", "pybrain", "libshark-dev", "python3-orange", "r-cran-mlbench", "caffe-cpu | caffe-cuda", "torch-core-free", "libmlpack-dev", "toulbar2", "r-cran-metrics", "r-cran-mlr", "spacy", "python3-thinc", "python3-amp", "python3-keras", "python3-lasagne", "streamlit"], "ignore": [], "avoid": []}, "linguistics": {"depends": [], "suggests": ["libticcutils2-dev", "frogdata", "libtimbl3-dev", "libtimbl4-dev", "libtimblserver2-dev", "libmbt0-dev", "libucto1-dev", "libfolia-dev", "wnsqlbuilder", "python3-nltk", "apertium-af-nl", "apertium-apy", "apertium-arg", "apertium-arg-cat", "apertium-bel", "apertium-bel-rus", "apertium-br-fr", "apertium-ca-it", "apertium-cat", "apertium-cat-srd", "apertium-crh", "apertium-crh-tur", "apertium-cy-en", "apertium-dan", "apertium-dan-nor", "apertium-en-ca", "apertium-en-es", "apertium-en-gl", "apertium-eo-ca", "apertium-eo-en", "apertium-eo-es", "apertium-eo-fr", "apertium-es-ast", "apertium-es-ca", "apertium-es-gl", "apertium-es-it", "apertium-es-pt", "apertium-es-ro", "apertium-eu-en", "apertium-eu-es", "apertium-fra", "apertium-fra-cat", "apertium-fr-ca", "apertium-fr-es", "apertium-hbs", "apertium-hbs-eng", "apertium-hbs-mkd", "apertium-hbs-slv", "apertium-hin", "apertium-id-ms", "apertium-isl", "apertium-isl-eng", "apertium-is-sv", "apertium-ita", "apertium-kaz", "apertium-kaz-tat", "apertium-mk-bg", "apertium-mk-en", "apertium-mlt-ara", "apertium-nno", "apertium-nno-nob", "apertium-nob", "apertium-oc-ca", "apertium-oc-es", "apertium-oci", "apertium-pol", "apertium-pt-ca", "apertium-pt-gl", "apertium-rus", "apertium-separable", "apertium-sme-nob", "apertium-spa", "apertium-spa-arg", "apertium-srd", "apertium-srd-ita", "apertium-swe", "apertium-swe-dan", "apertium-swe-nor", "apertium-szl", "apertium-tat", "apertium-tur", "apertium-ukr", "apertium-urd", "apertium-urd-hin", "python3-streamparser", "libcg3-dev", "r-cran-nlp", "r-cran-tm", "python3-snowballstemmer"], "recommends": ["wordnet", "apertium", "apertium-lex-tools", "link-grammar", "artha", "sequitur-g2p", "timbl", "timblserver", "mbt", "mbtserver", "ucto", "dimbl", "frog", "collatinus", "python3-timbl", "travatar", "cg3", "libcld2-dev", "python3-pynlpl", "uctodata", "giella-sme", "hfst", "hfst-ospell", "lttoolbox", "r-cran-snowballc", "r-cran-lexrankr", "spacy", "python3-thinc", "irstlm"], "ignore": [], "avoid": []}}
\ No newline at end of file
View it on GitLab: https://salsa.debian.org/blends-team/science/-/compare/9f738eb48f7e03f5d34d539610ecb03eedd0624b...da124f2db4851a91e9652a3236ff55e686a51d7c
--
View it on GitLab: https://salsa.debian.org/blends-team/science/-/compare/9f738eb48f7e03f5d34d539610ecb03eedd0624b...da124f2db4851a91e9652a3236ff55e686a51d7c
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/blends-commit/attachments/20210511/63946aee/attachment-0001.htm>
More information about the Blends-commit
mailing list