[Blends-commit] [Git][blends-team/pan][master] Add packages pushed by SOLEIL
Emmanuel FARHI (@farhi-guest)
gitlab at salsa.debian.org
Sat Apr 9 16:06:54 BST 2022
Emmanuel FARHI pushed to branch master at Debian Blends Team / pan
Commits:
d979722f by Emmanuel FARHI at 2022-04-09T17:05:37+02:00
Add packages pushed by SOLEIL
- - - - -
15 changed files:
- tasks/coherent-diffraction
- tasks/data-reduction-frameworks
- tasks/data-reduction-frameworks-dev
- tasks/diffraction
- tasks/grazing-incidence
- tasks/imaging
- tasks/laue
- tasks/machine-learning
- tasks/modelling
- tasks/mx
- tasks/powder
- tasks/small-angle-scattering
- tasks/spectroscopy
- tasks/tomography
- tasks/xas
Changes:
=====================================
tasks/coherent-diffraction
=====================================
@@ -1,9 +1,13 @@
Format: https://blends.debian.org/blends/1.1
Task: coherent-diffraction
Description: coherent diffraction softwares
- This metapackage will install PAN Blend coherent diffraction packages.
+ This metapackage will install X-ray photons-and-neutrons PAN Blend coherent diffraction packages.
Comment: Improve the Description
+Recommends: facet-analyser
+
+Recommends: python3-moviepy
+
Suggests: bonsu
Homepage: http://code.google.com/p/bonsu/
License: GPL3+
=====================================
tasks/data-reduction-frameworks
=====================================
@@ -1,13 +1,15 @@
Format: https://blends.debian.org/blends/1.1
Task: data-reduction-frameworks
Description: Data reduction frameworks
- This metapackage will install frameworks dedicated to the data reduction
+ This metapackage will install X-ray photons-and-neutrons PAN frameworks dedicated to the data reduction
Comment: improve the description
Recommends: admesh
Recommends: bcolz-doc
+Recommends: clpeak
+
Recommends: h5utils
Recommends: hdf5-tools
@@ -26,8 +28,12 @@ Recommends: imagej
Recommends: labplot
+Recommends: libxrl11, libxrl-dev
+
Recommends: libxy-bin
+Recommends: looktxt
+
Recommends: lz4
Recommends: ngraph-gtk
@@ -120,12 +126,18 @@ Recommends: python3-tifffile
Recommends: python3-traitlets
+Recommends: python3-pyvkfft
+
Recommends: python3-xarray
Recommends: python3-xelatex
+Recommends: python3-xraydb
+
Recommends: python3-zarr
+Recommends: qemu-web-desktop
+
Recommends: scilab
Recommends: silx
@@ -148,10 +160,10 @@ Recommends: zstd
-
-
# Jupiter
+Recommends: jupyterhub
+
Recommends: jupyter
Recommends: jupyter-client
Recommends: jupyter-console
=====================================
tasks/data-reduction-frameworks-dev
=====================================
@@ -2,7 +2,7 @@ Format: https://blends.debian.org/blends/1.1
Task: data-reduction-frameworks-dev
Description: PAN Debian data reduction frameworks dev
This metapackage will install all PAN Blend packages. This is
- a temporary package until we sorted all packages into the right
+ a temporary package until we sort all packages into the right
categories.
comment: Improve the description
=====================================
tasks/diffraction
=====================================
@@ -1,7 +1,7 @@
Format: https://blends.debian.org/blends/1.1
Task: diffraction
Description: diffraction softwares suit
- This metapackage will install all diffraction softwares
+ This metapackage will install all X-ray photons-and-neutrons PAN diffraction softwares
Comment: Improve the description
Recommends: binoculars, binoculars-doc, python3-binoculars
@@ -10,6 +10,8 @@ Recommends: debichem-crystallography
Recommends: density-fitness
+Recommends: dioptas
+
Recommends: fityk
Recommends: gcrystal
@@ -28,11 +30,17 @@ Recommends: python3-denss
Recommends: python3-dials-data
+Recommends: python3-moviepy
+
Recommends: python3-xrayutilities, python-xrayutilities-doc
+Recommends: python3-pyxrd
+
Recommends: python3-silx, python-silx-doc, silx
-Suggests: dioptas
+Recommends: dioptas
+
+Recommends: libobjcryst, python3-pyobjcryst
Suggests: nebula
Homepage: https://github.com/Natnux/nebula
=====================================
tasks/grazing-incidence
=====================================
@@ -1,6 +1,6 @@
Format: https://blends.debian.org/blends/1.1
Task: grazing-incidence
-Description: Grazing incidence X-ray and neutron diffraction
+Description: Grazing incidence X-ray photon and neutron diffraction
This metapackage will install all GID, GIXD, GIND, GISAS, GISAXS, GISANS software
Comment: Improve the description
@@ -14,6 +14,8 @@ Recommends: python3-genx
Recommends: python3-xrayutilities, python-xrayutilities-doc
+Recommends: python3-moviepy
+
Suggest: x-socs
Homepage: http://sourceforge.net/projects/xsocs/?source=directory
License: LGPL-2+
=====================================
tasks/imaging
=====================================
@@ -1,7 +1,7 @@
Format: https://blends.debian.org/blends/1.1
Task: imaging
Description: Imaging Softwares
- This metapackage will install all imaging softwares
+ This metapackage will install all X-ray photons-and-neutrons PAN imaging softwares
Comment: Improve the description
Recommends: 3depict
@@ -14,6 +14,8 @@ Recommends: astro-python3
Recommends: astropy-utils
+Recommends: facet-analyser
+
Recommends: g3data
Recommends: giza-dev
@@ -42,6 +44,8 @@ Recommends: imview
Recommends: kst
+Recommends: mantis-xray
+
Recommends: mayavi2
Recommends: med-imaging
@@ -76,6 +80,8 @@ Recommends: python3-hyperspy
Recommends: python3-imexam
+Recommends: python3-moviepy
+
Recommends: python3-olefile
Recommends: python3-photutils
@@ -104,6 +110,6 @@ Recommends: relion-gui-cuda
Recommends: sextractor
-Suggests: threeb
+Recommends: threeb, threeb-imagej
Recommends: veusz
=====================================
tasks/laue
=====================================
@@ -1,7 +1,7 @@
Format: https://blends.debian.org/blends/1.1
Task: laue
Description: laue software suit
- This metapackage will install all laue softwares
+ This metapackage will install all -ray photons-and-neutrons PAN laue softwares
Comment: Improve the description
Suggests: esmeralda
=====================================
tasks/machine-learning
=====================================
@@ -1,7 +1,7 @@
Format: https://blends.debian.org/blends/1.1
Task: machine-learning
Description: Machine learning Softwares
- This metapackage will install all the machine learning softwares
+ This metapackage will install all the machine learning softwares for photons-and-neutrons PAN
Comment: Improve the description
Recommends: keras-doc, python3-keras, python3-keras-applications, python3-keras-preprocessing
=====================================
tasks/modelling
=====================================
@@ -1,7 +1,7 @@
Format: https://blends.debian.org/blends/1.1
Task: modelling
Description: Modeling Softwares
- This metapackage will install all madelling softwares
+ This metapackage will install all modelling softwares for X-ray photons-and-neutrons PAN
Comment: Improve the description
Recommends: debichem-analytical-biochemistry
@@ -23,3 +23,13 @@ Recommends: debichem-periodic-abinitio
Recommends: debichem-semiempirical
Recommends: debichem-visualisation
+
+Recommends: python3-phonopy
+
+Recommends: mcstas-tools-python-mcgui, mcpl, mcstas, mcstas-comps, libncrystal-bin
+
+Recommends: mcxtrace-tools-python-mcgui, mcpl, mcxtrace, mcxtrace-comps, libncrystal-bin
+
+Recommends: mumax3
+
+Recommends: python3-xrt
=====================================
tasks/mx
=====================================
@@ -1,9 +1,15 @@
Format: https://blends.debian.org/blends/1.1
Task: mx
Description: Macro Molecular diffraction
- This metapackage will install all MX diffraction softwares.
+ This metapackage will install all MX diffraction softwares for X-ray photons-and-neutrons PAN.
Comment: Improve the description
+Recommends: python3-cctbx
+
+Recommends: python3-dials-data
+
+Recommends: python3-extra-data
+
Suggests: coot
WNPP: 531904
Homepage: http://biop.ox.ac.uk/coot/
=====================================
tasks/powder
=====================================
@@ -1,9 +1,12 @@
Format: https://blends.debian.org/blends/1.1
Task: powder
Description: powder diffraction
- This metapackage will install all powder diffraction softwares.
+ This metapackage will install all X-ray photons-and-neutrons PAN powder diffraction softwares.
Comment: Improve the description
+
+Recommends: dioptas
+
Recommends: fityk
Recommends: libxy-bin
@@ -12,9 +15,9 @@ Recommends: objcryst-fox
Recommends: pyfai
-Recommends: spd
+Recommends: python3-pyxrd
-Recommends: dioptas
+Recommends: spd
Suggests: fullprof
Homepage: http://www.ill.eu/sites/fullprof
=====================================
tasks/small-angle-scattering
=====================================
@@ -1,16 +1,22 @@
Format: https://blends.debian.org/blends/1.1
Task: small-angle-scattering
Description: small angle scattering
- This metapackage will install all PAN Blend small angle scattering
+ This metapackage will install all X-ray photons-and-neutrons PAN Blend small angle scattering
packages.
Comment: improve the description
-Recommends: python3-denss
+Recommends: dioptas
Recommends: fityk
Recommends: pyfai
+Recommends: python3-bioxtasraw
+
+Recommends: python3-denss
+
+Recommends: python3-freesas
+
Recommends: python3-sasmodels, python-sasmodels-doc
Recommends: python3-sasview, sasview, sasview-doc
=====================================
tasks/spectroscopy
=====================================
@@ -1,16 +1,30 @@
Format: https://blends.debian.org/blends/1.1
Task: spectroscopy
Description: X-Rays and Neutron spectroscopy
- This metapackage will install all spectroscopy packages.
+ This metapackage will install all X-ray photons-and-neutrons PAN spectroscopy packages (XPS, ARPES, IXS, ...).
+
+Recommends: dmrgpp
Recommends: etsf-io
+Recommends: mantis-xray
+
+Recommends: navarp
+
Recommends: pymca
Recommends: python3-arpys
Recommends: python3-igor
+Recommends: python3-phonopy
+
+Recommends: python3-pyimagetool
+
+Recommends: python3-spectral
+
+Recommends: python3-xrstools
+
Suggests: arpys
Homepage: https://github.com/kuadrat/arpys
License: GPL3v+
=====================================
tasks/tomography
=====================================
@@ -1,11 +1,13 @@
Format: https://blends.debian.org/blends/1.1
Task: tomography
Description: Photons and Neutrons (PAN) Blend tomography
- This metapackage will install all PAN Blend tomography packages.
+ This metapackage will install all X-ray photons-and-neutrons PAN Blend tomography packages.
Comment: improve the Description
Recommends: ctsim, ctsim-doc, ctsim-help
+Recommends: facet-analyser
+
Recommends: geomview
Recommends: gir1.2-ufo-1.0, ufo-core-doc
@@ -22,21 +24,21 @@ Recommends: paraview, paraview-dev, paraview-doc
Recommends: plastimatch
+Recommends: python3-freeart
+
Recommends: python3-pyhst2-cuda
Recommends: python3-paraview
Recommends: python3-skimage
-Recommends: rheolef
+Recommends: python3-tomogui
-Recommends: ufo-filters, ufo-filters-doc
+Recommends: python3-tomopy
+Recommends: rheolef
-Suggests: freeart
-Homepage: https://forge.epn-campus.eu/projects/freeart
-License: LGPL
-Pkg-Description: SART reconstruction algorithm
+Recommends: ufo-filters, ufo-filters-doc
Suggests: imagej-pluggins-tomo
Homepage: https://www.cells.es/Members/cpascual/files/public/scisoft_files/imagej-tomo-plugins/at_download
=====================================
tasks/xas
=====================================
@@ -1,13 +1,19 @@
Format: https://blends.debian.org/blends/1.1
Task: xas
Description: EXAFS and XANES
- This metapackage will install all EXAFS and XANES packages.
+ This metapackage will install all X-ray photons-and-neutrons PAN EXAFS and XANES absorption spectroscopy packages.
Comment: Improve the description
+Recommends: ifeffit
+
+Recommends: horae
+
Depends: pymca
Depends: quantum-espresso
+Recommends: python3-xraylarch
+
Suggests: xraylarch
Homepage: http://xraypy.github.io/xraylarch/
Vcs-Browser: https://salsa.debian.org/science-team/xraylarch
View it on GitLab: https://salsa.debian.org/blends-team/pan/-/commit/d979722f474e7d1c332c27bbfc06c0fdba66330b
--
View it on GitLab: https://salsa.debian.org/blends-team/pan/-/commit/d979722f474e7d1c332c27bbfc06c0fdba66330b
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