[Blends-commit] [Git][blends-team/med][master] Add some new packages

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Blends Team / med


Commits:
b770685b by Andreas Tille at 2022-11-16T08:16:24+01:00
Add some new packages

- - - - -


2 changed files:

- tasks/bio
- tasks/bio-dev


Changes:

=====================================
tasks/bio
=====================================
@@ -291,7 +291,7 @@ Recommends: mira-assembler
 
 Recommends: alien-hunter
 
-Recommends: seqan-apps
+Recommends: seqan-apps, seqan-needle, seqan-raptor
 
 Recommends: ncoils
 
@@ -470,6 +470,8 @@ Remark: Mentioned at http://www.renard.it/, developed in RKI
 
 Recommends: bio-vcf
 
+Recommends: btllib-tools
+
 Recommends: cnvkit
 
 Recommends: csb
@@ -1419,6 +1421,8 @@ Recommends: sap
 Remark: Precondition for T-Coffee
  see http://wiki.debian.org/DebianMed/TCoffee
 
+Recommends: savvy-util
+
 Recommends: scrappie
 
 Recommends: scrm
@@ -1442,18 +1446,6 @@ Recommends: seqsero
 
 Recommends: seqtk
 
-Recommends: sequenceconverter.app
-Remark: Formerly part of Debian as biococoa.app but removed
- The package was part of Debian under the name biococoa.app which is confusing
- because biococoa is actually a library for working with sequences under GNUstep.
- There was an attempt to reupload under the name sequenceconverter.app but
- ftpmaster did not accepted the package.  The reasons can be read here:
- http://lists.alioth.debian.org/pipermail/debian-med-packaging/2009-May/003430.html
- .
- Version 1.6 is the last upstream version that works with GNUstep.  If
- newer versions are needed to work under Linux try to convince upstream to
- support GNUstep.
-
 Recommends: seqwish
 
 Suggests: seqcluster


=====================================
tasks/bio-dev
=====================================
@@ -674,3 +674,7 @@ Suggests: python3-bioblend
 Recommends: python3-gtfparse
 
 Suggests: libterraces-dev
+
+Suggests: libbtllib-dev
+
+Suggests: libsavvy-dev



View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/b770685b381588e853261aa718e143715203e334

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View it on GitLab: https://salsa.debian.org/blends-team/med/-/commit/b770685b381588e853261aa718e143715203e334
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