[Blends-commit] [Git][blends-team/science][master] Remove removed packages, check for renamed / replaced packages

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Blends Team / science


Commits:
d05a6660 by Andreas Tille at 2023-03-02T17:21:23+01:00
Remove removed packages, check for renamed / replaced packages

- - - - -


12 changed files:

- tasks/machine-learning
- tasks/mathematics
- tasks/mathematics-dev
- tasks/meteorology-dev
- tasks/nanoscale-physics
- tasks/nanoscale-physics-dev
- tasks/neuroscience-cognitive
- tasks/numericalcomputation
- tasks/robotics
- tasks/simulations
- tasks/typesetting
- tasks/viewing


Changes:

=====================================
tasks/machine-learning
=====================================
@@ -11,8 +11,7 @@ Comment: Prolog (and alike) systems for inductive reasoning
 
 Recommends: libtorch3-dev
 
-Recommends: libshogun-dev, libfann-dev, libsvm-dev, libcomplearn-dev, \
-            libqsearch-dev, liblinear-dev, libocas-dev
+Recommends: libshogun-dev, libfann-dev, libsvm-dev, liblinear-dev, libocas-dev
 Comment: above libraries have also variety of interfaces to high-level
  scripting languages (e.g. Python) and even possibly some interactive GUI
 
@@ -101,8 +100,6 @@ Recommends: libshark-dev
 
 Suggests: science-statistics, science-numericalcomputation
 
-Suggests: libacovea-dev
-
 Suggests: science-typesetting
 Meta-Suggests: svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/typesetting
 


=====================================
tasks/mathematics
=====================================
@@ -9,7 +9,7 @@ Description: Debian Science Mathematics packages
 Recommends: axiom, ginac-tools, xmaxima, wxmaxima
 Why: Symbolic computations
 
-Recommends: pari-gp, pari-extra
+Recommends: pari-gp
 
 Recommends: gap, magnus
 Why: Group theory
@@ -46,7 +46,7 @@ X-Comment: According to Hendrik Tews <tews at os.inf.tu-dresden.de> these might end
            in a separate metapackage "theorem-proving" or "formal-methods"
            see http://lists.debian.org/debian-science/2012/05/msg00077.html
 
-Recommends: coq, proofgeneral, proofgeneral-coq
+Recommends: coq, proofgeneral
 
 Recommends: matita, agda, prover9, hol-light, minisat
 
@@ -64,7 +64,7 @@ Recommends: freemat
 
 Recommends: mathomatic
 
-Recommends: scilab, scilab-scimax, scilab-ann
+Recommends: scilab, scilab-ann
 
 Recommends: regina-normal, snappea
 Why: Requested by Ben Burton
@@ -92,8 +92,6 @@ Why: Automated Solution of Partial Differential Equations
 Recommends: python3-ffc, python3-ufl
 Why: compiler for finite element variational forms
 
-Recommends: kseg
-
 Recommends: polylib-utils
 
 Recommends: rheolef


=====================================
tasks/mathematics-dev
=====================================
@@ -9,7 +9,7 @@ Description: Debian Science Mathematics-dev packages
 Recommends: libnglib-dev
 Why: FEA, mesh generator
 
-Suggests: libtet1.4.2-dev
+Suggests: libtet1.5-dev
 Why: non-free
 
 Recommends: python3-numpy
@@ -75,7 +75,7 @@ Recommends: libstxxl-dev
 
 Recommends: libnewmat10-dev
 
-Recommends: libmadlib-dev, libtet1.4-dev
+Recommends: libmadlib-dev
 Why: Mesh adaptation
 
 Recommends: python3-dmsh, python3-meshplex, python3-meshzoo
@@ -98,8 +98,6 @@ Why: Python interface to PETSc
 Recommends: python3-slepc4py
 Why: Python interface to SLEPc
 
-Suggests:  libtrilinos-dev
-
 Suggests: libqrupdate-dev
 
 Recommends: python3-openturns, libopenturns-dev


=====================================
tasks/meteorology-dev
=====================================
@@ -15,7 +15,7 @@ Why: Used by Fortran build tools
 Recommends: libemos-dev
 Why: standard library for BUFR formats
 
-Recommends: mpi-defaults-dev
+Recommends: mpi-defaults
 Why: Much Meteorology software is MPI enabled
 
 Recommends: libcoarrays-dev


=====================================
tasks/nanoscale-physics
=====================================
@@ -59,7 +59,7 @@ Why: Symbolic maths
 
 Recommends: cadabra
 
-Recommends: extrema, ggobi, mayavi2, udav
+Recommends: ggobi, mayavi2, udav
 Why: Data analysis
 
 Recommends: gperiodic


=====================================
tasks/nanoscale-physics-dev
=====================================
@@ -78,14 +78,6 @@ Pkg-Description: Library to read and write pseudopotentials
  some cases.
 
 Recommends: libsymspg-dev
-Homepage: http://sourceforge.net/projects/spglib/
-Responsible: DebiChem Project <debichem-devel at lists.alioth.debian.org>
-License: BSD
-WNPP: 602113
-Pkg-Description: Crystal symmetry finder library
- Spglib is a C-library written for finding crystal symmetry. Symmetry
- operations, space groups, ..., can be obtained using this symmetry
- finder.
 
 Recommends: root-system
 


=====================================
tasks/neuroscience-cognitive
=====================================
@@ -49,24 +49,12 @@ Suggests: python-mvpa2
 Recommends: python3-nipy, python3-nipype, python3-nitime, python3-dipy
 #Why: Python frameworks for analysis in neuroimaging
 
-Recommends: openwalnut-qt4
-Why: Frameworks for visualization and analysis in neuroimaging
-
 Recommends: nifti2dicom, qnifti2dicom
 Why: Requested by Daniele E. Domenichelli <daniele.domenichelli at gmail.com>
 
 Recommends: caret
 Why: Cortical reconstruction and volume-to-surface mapping.
 
-#Recommends: python-pyepl
-#Why: Library to write and run psychological experiments.
-#Published-Title: PyEPL: A cross-platform experiment-programming library
-#Published-Authors: Aaron S. Geller, Ian K. Schleifer, Per B. Sederberg, Joshua Jacobs, Michael J. Kahana
-#Published-In: Behavioral Research Methods, 39: 950-958
-#Published-Year: 2007
-#Published-URL: http://prdownloads.sourceforge.net/pyepl/pyepl_brmic.pdf?download
-
-
 Recommends: praat
 Why: Speech synthesis and analysis -- standard tool for auditory stimulus
      generation.
@@ -156,11 +144,6 @@ Recommends: lipsia
 Recommends: openmeeg-tools
 
 Recommends: mricron
-Published-Title: Improving lesion-symptom mapping
-Published-Authors: Chris Rorden, Hans-Otto Karnath, Leonardo Bonilha
-Published-In: Journal of Cognitive Neuroscience, 19: 1081-1088
-Published-Year: 2007
-Published-URL: http://www.ncbi.nlm.nih.gov/pubmed/17583985
 
 Recommends: itksnap
 
@@ -248,7 +231,7 @@ Published-Title: EEGLAB: an open source toolbox for analysis of single-trial EEG
 Published-Year: 2004
 Registration: http://sccn.ucsd.edu/eeglab/install.html
 
-#Recommends: python-pyxnat
+Recommends: python3-pyxnat
 
 Suggests: debruijn
 Pkg-URL: http://neuro.debian.net/pkgs/debruijn.html


=====================================
tasks/numericalcomputation
=====================================
@@ -26,18 +26,13 @@ Why: Perl based numerical programming environment similar to Matlab
 Recommends: gnudatalanguage
 Why: numerical programming environment compatible with IDL
 
-Recommends: scilab, scilab-scimax, scilab-swt, scilab-ann
-
-Suggests: scilab-jims, scilab-metanet, libscirenderer-java
-
-#Suggests: python3-sciscipy
+Recommends: scilab, scilab-ann
 
 Recommends: freemat
 
 Recommends: yorick
 
 Recommends: r-base
-Why: S is the statistician's Matlab and R is to S what Octave is to Matlab.
 
 Recommends: yade
 Why: platform for discrete element modeling


=====================================
tasks/robotics
=====================================
@@ -6,7 +6,7 @@ Description: Debian Robotics packages
  .
  You might also be interested in the science-engineering metapackage.
 
-Recommends: rtai, xenomai-runtime
+Recommends: xenomai-runtime
 
 Recommends: morse-simulator
 


=====================================
tasks/simulations
=====================================
@@ -17,8 +17,6 @@ Recommends: getdp
 Recommends: fdmnes
 Pkg-URL: http://people.debian.org/~tille/packages/fdmnes/
 
-Recommends: radiance
-
 Recommends: music-bin
 
 Recommends: calculix-ccx


=====================================
tasks/typesetting
=====================================
@@ -23,7 +23,7 @@ Recommends: texmaker, kile, lyx, texmacs, auctex, vim-latexsuite, texstudio, set
 
 Recommends: pandoc, pandoc-citeproc
 
-Suggests: openoffice.org-dmaths
+Suggests: libreoffice-dmaths
 
 Recommends: r-cran-knitr
 


=====================================
tasks/viewing
=====================================
@@ -30,7 +30,7 @@ Recommends: mayavi2
 
 Recommends: g3data
 
-Suggests: libgrits-dev, worldwind
+Suggests: libgrits-dev
 
 Suggests: med-imaging
 



View it on GitLab: https://salsa.debian.org/blends-team/science/-/commit/d05a6660af38274de648f9a594e7e09e9b4ba03b

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