[Blends-commit] [Git][blends-team/science][master] 2 commits: Remove r-cran-maptools from geography task since its removed from CRAN

Andreas Tille (@tille) gitlab at salsa.debian.org
Sat May 18 09:16:08 BST 2024



Andreas Tille pushed to branch master at Debian Blends Team / science


Commits:
b58ad312 by Andreas Tille at 2024-05-18T08:41:37+02:00
Remove r-cran-maptools from geography task since its removed from CRAN

- - - - -
c0804542 by Andreas Tille at 2024-05-18T09:05:45+02:00
Update dependencies

- - - - -


3 changed files:

- debian/changelog
- debian/control
- tasks/geography


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+debian-science (1.14.6) UNRELEASED; urgency=medium
+
+  * Remove r-cran-maptools from geography task since its removed from CRAN
+
+ -- Andreas Tille <tille at debian.org>  Sat, 18 May 2024 08:40:55 +0200
+
 debian-science (1.14.5) unstable; urgency=medium
 
   * Preparing Bookworm release


=====================================
debian/control
=====================================
@@ -191,7 +191,7 @@ Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
 Recommends: adun.app,
-            apbs,
+            atomes,
             avogadro,
             bkchem,
             bodr,
@@ -199,22 +199,17 @@ Recommends: adun.app,
             chemical-mime-data,
             chemical-structures,
             chemtool,
-            cp2k,
             drawxtl,
             easychem,
             feff85exafs,
-            gabedit,
             galculator,
-            gamgi,
             garlic,
             gausssum,
             gchempaint,
             gcrystal,
             gcu-bin,
-            gdis,
             gdpc,
             gelemental,
-            ghemical,
             gperiodic,
             gromacs,
             jmol,
@@ -240,9 +235,15 @@ Recommends: adun.app,
             xbs,
             xdrawchem,
             xmakemol-gl | xmakemol
-Suggests: fdmnes,
+Suggests: apbs,
+          cp2k,
+          fdmnes,
+          gabedit,
+          gamgi,
           gcu-plugin,
+          gdis,
           gdpc-examples,
+          ghemical,
           gromacs-mpich | gromacs-openmpi,
           libcoordgen-dev,
           libegad,
@@ -273,31 +274,30 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: clickhouse-tools,
-            csvkit,
+Recommends: csvkit,
             engauge-digitizer,
             filo,
-            g3data,
             ghkl,
             jaaa,
             libfreenect-dev,
             libgetdata-tools,
             lxi-tools,
             netcdf-bin,
-            open3d-gui,
-            open3d-tools,
             python3-pyvisa,
-            segyio-bin,
             vnlog,
             xlsx2csv,
             xyscan
 Suggests: binoculars,
+          clickhouse-tools,
           epics,
+          g3data,
           gnudatalanguage,
           gpsd,
           hart,
           linux-image-2.6-rt,
           mx-dataacquisition,
+          open3d-gui,
+          open3d-tools,
           opendap,
           plot-digitizer,
           python3-pytango,
@@ -306,6 +306,7 @@ Suggests: binoculars,
           python3-taurus,
           qtdmm,
           rt-tests,
+          segyio-bin,
           tango-accesscontrol,
           tango-db,
           tango-starter,
@@ -323,9 +324,7 @@ Depends: ${misc:Depends},
          science-tasks (= ${source:Version})
 Recommends: libgetdata-dev,
             libgetdata-perl,
-            liblog4tango-dev,
             liblxi-dev,
-            libopen3d-dev,
             libopenrefine-arithcode-java,
             libopenrefine-vicino-java,
             libsdsl-dev,
@@ -337,16 +336,19 @@ Recommends: libgetdata-dev,
             python3-csvkit,
             python3-datacache,
             python3-guidata,
-            python3-intake,
-            python3-open3d,
             python3-pygetdata,
             python3-pymeasure,
-            python3-segyio,
-            python3-tango,
+            python3-trx-python,
             python3-vnlog,
             python3-xrayutilities
 Suggests: libbcm2835-dev,
+          liblog4tango-dev,
+          libopen3d-dev,
           python3-asciitree,
+          python3-intake,
+          python3-open3d,
+          python3-segyio,
+          python3-tango,
           r-cran-mi,
           r-cran-ncdf4
 Description: Debian Science data acquisition development packages
@@ -360,9 +362,7 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: datalad,
-            datalad-container,
-            git-annex,
+Recommends: git-annex,
             hdf5-filter-plugin,
             hdf5-filter-plugin-blosc-serial,
             hdf5-filter-plugin-zfp-serial,
@@ -372,8 +372,11 @@ Recommends: datalad,
             python3-mdp,
             python3-nxs,
             python3-pyzoltan,
-            virtuoso-opensource
-Suggests: libnexus-dev,
+            virtuoso-opensource,
+            visidata
+Suggests: datalad,
+          datalad-container,
+          libnexus-dev,
           libnexus-java,
           libplfit-dev,
           python3-openpyxl,
@@ -395,6 +398,7 @@ Recommends: environment-modules,
             gridengine-exec,
             gridengine-master,
             gridengine-qmon,
+            htcondor,
             ipython3,
             mpich,
             nordugrid-arc-client,
@@ -403,7 +407,6 @@ Suggests: coop-computing-tools,
           dmtcp,
           globus-core,
           hpcc,
-          htcondor,
           mpich2python,
           octave-mpi,
           openmpipython,
@@ -537,10 +540,7 @@ Recommends: calculix-ccx,
             calculix-cgx,
             cba,
             cgns-convert,
-            code-saturne,
             dime,
-            fenics,
-            freecad,
             gerris,
             getdp,
             gmsh,
@@ -549,12 +549,9 @@ Recommends: calculix-ccx,
             libsilo-bin,
             lxi-tools,
             netgen,
-            oce-draw,
             openfoam,
             persalys,
             python3-admesh,
-            python3-dolfin,
-            python3-escript | python3-escript-mpi,
             python3-fiat,
             python3-openturns,
             python3-persalys,
@@ -562,9 +559,7 @@ Recommends: calculix-ccx,
             sailcut,
             scram,
             solvespace,
-            syrthes,
-            tetgen,
-            z88
+            tetgen
 Suggests: ann-tools,
           avl,
           brlcad,
@@ -573,15 +568,21 @@ Suggests: ann-tools,
           calculix-cgx-examples,
           code-aster,
           code-aster-gui,
+          code-saturne,
           diet-agent,
           eficas,
           feel++-apps,
+          fenics,
+          freecad,
           hdfview,
           logcentral,
           logcentral-tools,
           metis-edf,
+          oce-draw,
           openmeca,
           pycgns,
+          python3-dolfin,
+          python3-escript | python3-escript-mpi,
           r-cran-spc,
           salome-gui,
           salome-jobmanager,
@@ -591,8 +592,10 @@ Suggests: ann-tools,
           salome-smesh,
           salome-yacs,
           sfc,
+          syrthes,
           tochnog,
-          varkon
+          varkon,
+          z88
 Description: Debian Science Engineering packages
  This metapackage is part of the Debian Pure Blend "Debian Science"
  and installs packages related to Engineering.
@@ -607,9 +610,7 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: code-saturne-bin,
-            code-saturne-include,
-            libadios-dev,
+Recommends: libadios-dev,
             libalberta-dev,
             libann-dev,
             libbasix-dev,
@@ -631,11 +632,8 @@ Recommends: code-saturne-bin,
             libmedimport-dev,
             libnetcdf-dev,
             libnlopt-dev,
-            liboce-ocaf-dev,
-            liboce-visualization-dev,
             libopenturns-dev,
             libp4est-dev,
-            libplb-dev,
             libsilo-dev,
             libsis-jhdf5-java,
             libslicot-dev,
@@ -652,6 +650,8 @@ Recommends: code-saturne-bin,
             r-cran-rnetcdf,
             trilinos-all-dev
 Suggests: ceres-solver-doc,
+          code-saturne-bin,
+          code-saturne-include,
           libbox-dev,
           libdiet-admin2.8-dev,
           libdiet-client2.8-dev,
@@ -667,6 +667,9 @@ Suggests: ceres-solver-doc,
           libluminate-dev,
           libmetis-edf-dev,
           libnfft3-dev,
+          liboce-ocaf-dev,
+          liboce-visualization-dev,
+          libplb-dev,
           libqwt-dev | libqwt5-qt4-dev,
           libslepc3.4.2-dev,
           libug-dev,
@@ -750,7 +753,6 @@ Recommends: avce00,
             r-cran-mapdata,
             r-cran-mapproj,
             r-cran-maps,
-            r-cran-maptools,
             r-cran-raster,
             r-cran-sp,
             sac2mseed,
@@ -803,8 +805,8 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: dials,
-            feynmf,
+Recommends: feynmf,
+            looptools,
             neuron,
             sdpb
 Suggests: cernlib,
@@ -812,6 +814,7 @@ Suggests: cernlib,
           cernlib-core,
           cernlib-extras,
           cernlib-montecarlo,
+          dials,
           dzedit,
           geant321,
           geant321-doc,
@@ -864,7 +867,6 @@ Suggests: cernlib,
           libroot-tmva5.34,
           libroot-tree-treeplayer5.34,
           libroot-tree5.34,
-          looptools,
           nypatchy,
           octave-lhapdf,
           paw,
@@ -926,20 +928,20 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: libclhep-dev,
+Recommends: fcc,
+            libclhep-dev,
             libfastjet-dev,
             libfastjet-fortran-dev,
             libfastjetplugins-dev,
             libfastjettools-dev,
-            libhepmc3-dev,
             libkim-api-dev,
             libmctc-lib-dev,
             libmmdb2-dev,
             libncrystal-dev,
+            libooptools-dev,
             libsiscone-dev,
             libsiscone-spherical-dev,
             neuron-dev,
-            python3-dials,
             python3-mpiplus,
             python3-neuron,
             python3-pymbar
@@ -949,17 +951,16 @@ Suggests: cernlib-base-dev,
           clhep-doc,
           fastjet-doc,
           fastjet-examples,
-          fcc,
           hepmc-examples,
           hepmc-reference-manual,
           hepmc-user-manual,
           herwig++-dev,
           lhapdf-ccwrap-doc,
           libhepmc-dev,
+          libhepmc3-dev,
           libhepmcfio-dev,
           libhepmcinterface8-dev,
           liblhapdf-dev,
-          libooptools-dev,
           libpythia8-dev,
           librivet-dev,
           libroot-bindings-python-dev,
@@ -1011,6 +1012,7 @@ Suggests: cernlib-base-dev,
           pythia8-doc-html,
           pythia8-doc-worksheet,
           pythia8-examples,
+          python3-dials,
           refmac-dictionary,
           rivet-plugins-dev,
           rivet-plugins-doc,
@@ -1080,7 +1082,6 @@ Depends: ${misc:Depends},
 Recommends: apertium,
             apertium-eval-translator,
             apertium-lex-tools,
-            artha,
             cg3,
             collatinus,
             dimbl,
@@ -1096,15 +1097,13 @@ Recommends: apertium,
             mbtserver,
             opennlp,
             python3-pynlpl,
-            python3-thinc,
             r-cran-lexrankr,
             r-cran-snowballc,
             sentencepiece,
             timbl,
             timblserver,
             ucto,
-            uctodata,
-            wordnet
+            uctodata
 Suggests: apertium-af-nl,
           apertium-apy,
           apertium-arg,
@@ -1180,6 +1179,7 @@ Suggests: apertium-af-nl,
           apertium-ukr,
           apertium-urd,
           apertium-urd-hin,
+          artha,
           frogdata,
           giella-sme,
           libapache-opennlp-java,
@@ -1200,6 +1200,7 @@ Suggests: apertium-af-nl,
           python3-sentencepiece,
           python3-snowballstemmer,
           python3-streamparser,
+          python3-thinc,
           python3-timbl,
           r-cran-nlp,
           r-cran-tm,
@@ -1207,7 +1208,8 @@ Suggests: apertium-af-nl,
           spacy,
           tfdocgen,
           travatar,
-          wnsqlbuilder
+          wnsqlbuilder,
+          wordnet
 Description: Debian Science Linguistics packages
  This metapackage is part of the Debian Pure Blend "Debian Science"
  and installs packages related to Linguistics.
@@ -1278,13 +1280,11 @@ Recommends: autoclass,
             python3-opencv,
             python3-sklearn,
             python3-statsmodels,
-            python3-torch,
             python3-vigra,
             r-cran-amore,
             r-cran-bayesm,
             r-cran-class,
             r-cran-cluster,
-            r-cran-gbm,
             r-cran-mass,
             r-cran-mcmcpack,
             r-cran-mnp,
@@ -1310,7 +1310,9 @@ Suggests: flann,
           lua-torch-xlua,
           pgapack,
           pybrain,
+          python3-torch,
           python3-torch-sparse,
+          r-cran-gbm,
           root-system,
           science-numericalcomputation,
           science-statistics,
@@ -1345,7 +1347,6 @@ Recommends: 4ti2,
             cryptominisat,
             eclib-tools,
             eprover,
-            fenics,
             flintqs,
             form,
             fplll-tools,
@@ -1392,7 +1393,6 @@ Recommends: 4ti2,
             netgen,
             normaliz,
             octave,
-            palp,
             pari-gp,
             persalys,
             phcpack,
@@ -1400,7 +1400,6 @@ Recommends: 4ti2,
             polylib-utils,
             proofgeneral,
             python3-deap,
-            python3-dolfin,
             python3-ffc,
             python3-minieigen,
             python3-openturns,
@@ -1410,10 +1409,7 @@ Recommends: 4ti2,
             qepcad,
             qhull-bin,
             qsopt-ex,
-            regina-normal,
             rheolef,
-            rubiks,
-            sagemath,
             sagemath-database-conway-polynomials,
             sagemath-database-cremona-elliptic-curves,
             sagemath-database-elliptic-curves,
@@ -1438,6 +1434,7 @@ Suggests: ann-tools,
           cliquer,
           evolver-ogl | evolver-nox,
           feel++-apps,
+          fenics,
           freefem3d,
           freemat,
           gap-gapdoc,
@@ -1457,10 +1454,15 @@ Suggests: ann-tools,
           model-builder,
           netgen-doc,
           octaviz,
+          palp,
           primesieve,
           prover9,
           pyomo,
+          python3-dolfin,
           r-cran-evd,
+          regina-normal,
+          rubiks,
+          sagemath,
           sagetex,
           scilab-ann,
           snappea,
@@ -1477,10 +1479,7 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: code-saturne-bin,
-            code-saturne-include,
-            coinor-libcoinmp-dev,
-            fenics,
+Recommends: coinor-libcoinmp-dev,
             fflas-ffpack,
             fftw-dev,
             gap-dev,
@@ -1490,13 +1489,11 @@ Recommends: code-saturne-bin,
             libarmadillo-dev,
             libarpack++2-dev,
             libarpack2-dev,
-            libatlas-base-dev,
             libbasix-dev,
             libblas-dev,
             libblis-dev,
             libblitz0-dev,
             libbraiding-dev,
-            libbrial-dev,
             libcdd-dev,
             libcgal-dev,
             libcminpack-dev,
@@ -1515,7 +1512,6 @@ Recommends: code-saturne-bin,
             libfftw3-dev,
             libflame-dev,
             libflann-dev,
-            libflint-arb-dev,
             libflint-dev,
             libfplll-dev,
             libfreefem++-dev,
@@ -1530,6 +1526,7 @@ Recommends: code-saturne-bin,
             libgsl0-dev,
             libhomfly-dev,
             libhypre-dev,
+            libigraph-dev,
             libiml-dev,
             libitsol-dev,
             libjama-dev,
@@ -1537,6 +1534,7 @@ Recommends: code-saturne-bin,
             liblapack-dev,
             liblbfgs-dev,
             liblfunction-dev,
+            liblibleidenalg-dev,
             liblinbox-dev,
             liblip-dev,
             liblrcalc-dev,
@@ -1553,15 +1551,12 @@ Recommends: code-saturne-bin,
             libmpfrc++-dev,
             libmps-dev,
             libmuparser-dev,
-            libnauty2-dev,
-            libnewmat10-dev,
             libnglib-dev,
             libopenblas-dev,
             libopenmesh-dev,
             libopenturns-dev,
             libp4est-dev,
             libparsington-java,
-            libplb-dev,
             libprimesieve-dev,
             libqcustomplot-dev,
             libqd-dev,
@@ -1595,16 +1590,13 @@ Recommends: code-saturne-bin,
             petsc-dev,
             python3-asteval,
             python3-basix,
-            python3-brial,
             python3-bumps,
             python3-cryptominisat,
             python3-cvxopt,
             python3-cypari2,
             python3-cython-blis,
             python3-dmsh,
-            python3-dolfin,
             python3-dolfinx,
-            python3-dtcwt,
             python3-ffc,
             python3-ffcx,
             python3-gimmik,
@@ -1620,7 +1612,6 @@ Recommends: code-saturne-bin,
             python3-optlang,
             python3-petsc4py,
             python3-pyemd,
-            python3-pyfftw,
             python3-slepc4py,
             python3-stopt,
             python3-swiglpk,
@@ -1630,14 +1621,19 @@ Recommends: code-saturne-bin,
             trilinos-all-dev,
             veccore-dev
 Suggests: cfortran,
+          code-saturne-bin,
+          code-saturne-include,
           cppad,
+          fenics,
           fflas-ffpack-dev-doc,
           fflas-ffpack-user-doc,
           givaro-dev-doc,
           givaro-user-doc,
           jsurf-alggeo,
           libamgcl-dev,
+          libatlas-base-dev,
           libbdd-dev,
+          libbrial-dev,
           libcblas-dev,
           libcliquer-dev,
           libdune-functions-dev,
@@ -1648,8 +1644,8 @@ Suggests: cfortran,
           libdune-typetree-dev,
           libdune-uggrid-dev,
           libfeel++-dev,
+          libflint-arb-dev,
           libgismo-dev,
-          libigraph0-dev,
           libitpp-dev,
           libjlapack-java,
           liblevmar-dev,
@@ -1657,11 +1653,14 @@ Suggests: cfortran,
           libmagma-dev,
           libmkl-full-dev,
           libmtj-java,
+          libnauty2-dev,
           libnetlib-java,
+          libnewmat10-dev,
           libnfft3-dev,
           libntl-dev,
           libortools-dev,
           libparmetis-dev,
+          libplb-dev,
           libpolybori-dev,
           libpolybori-groebner-dev,
           libpynac-dev,
@@ -1673,10 +1672,14 @@ Suggests: cfortran,
           libug-dev,
           openturns-examples,
           python3-amgcl,
+          python3-brial,
+          python3-dolfin,
+          python3-dtcwt,
           python3-linop,
           python3-msgpack-numpy,
           python3-numpy-groupies,
           python3-ortools,
+          python3-pyfftw,
           python3-pynfft,
           python3-pyviennacl,
           python3-threadpoolctl,
@@ -1704,7 +1707,6 @@ Recommends: cdftools,
             fpzip-utils,
             grads,
             harp,
-            libaec-tools,
             libatlas-ecmwf-utils,
             libdap-bin,
             libdap-doc,
@@ -1724,7 +1726,6 @@ Recommends: cdftools,
             python3-cmor,
             python3-drslib,
             python3-eccodes,
-            python3-ferret,
             python3-grib,
             python3-gsw,
             python3-iapws,
@@ -1737,9 +1738,11 @@ Suggests: dballe,
           geonetwork,
           gerris,
           gnudatalanguage,
+          libaec-tools,
           mbdyn,
           octave-octcdf,
           paraview,
+          python3-ferret,
           python3-openturns,
           r-base
 Description: Debian Science Meteorology packages
@@ -1796,7 +1799,6 @@ Recommends: ecbuild,
             python3-coda,
             python3-gpyfft,
             python3-openturns,
-            python3-pyfftw,
             python3-pyswarms,
             python3-sasmodels,
             python3-ulmo,
@@ -1817,6 +1819,7 @@ Suggests: gfortran,
           pkg-config,
           python3-coards,
           python3-esda,
+          python3-pyfftw,
           python3-threadpoolctl,
           udunits-bin
 Description: Debian Science Meteorology-dev packages
@@ -1835,20 +1838,16 @@ Recommends: abinit,
             ase,
             avogadro,
             binoculars,
-            cadabra,
             cbflib-bin,
             cif-linguist,
             cod-tools,
-            cp2k,
             drawxtl,
             etsf-io,
             feynmf,
             finalcif,
             fityk,
             garlic,
-            gdis,
             ggobi,
-            ghemical,
             gnuplot,
             gpaw,
             gperiodic,
@@ -1858,7 +1857,6 @@ Recommends: abinit,
             gwyddion,
             libblas3,
             liblapack3,
-            libssm-bin,
             mayavi2,
             mpqc,
             nco,
@@ -1877,19 +1875,22 @@ Recommends: abinit,
             sasview,
             science-numericalcomputation,
             scilab,
-            udav,
             v-sim,
             voronota
 Suggests: ape,
           atompaw,
           axiom,
           bigdft,
+          cadabra,
+          cp2k,
           dx,
           dx-doc,
           dxsamples,
           exciting,
           fdmnes,
           feel++-apps,
+          gdis,
+          ghemical,
           gpiv,
           gpivtools,
           hdf5-helpers,
@@ -1897,6 +1898,7 @@ Suggests: ape,
           libgraphviz-perl,
           libgsl0ldbl,
           liblevmar-2-6,
+          libssm-bin,
           maxima,
           netcdf-doc,
           octaviz,
@@ -1909,6 +1911,7 @@ Suggests: ape,
           scidavis,
           science-mathematics,
           science-statistics,
+          udav,
           wannier90-1,
           wannier90-2
 Description: Debian Science Nanoscale Physics packages
@@ -1940,17 +1943,13 @@ Recommends: abinit-doc,
             gsl-bin,
             libblas-dev,
             libcbf-dev,
-            libccp4-dev,
-            libcctbx-dev,
             libcexceptions-dev,
-            libclipper-dev,
             libcoordgen-dev,
             libetsf-io-dev,
             libetsf-io-doc,
             libfftw3-dev,
             libgsl0-dev,
             libhdf5-dev,
-            libhepmc3-dev,
             libkim-api-dev,
             liblapack-dev,
             liblapack-doc,
@@ -1961,51 +1960,55 @@ Recommends: abinit-doc,
             libnetcdf-dev,
             libnexus-dev,
             libnexus-java,
-            liboce-ocaf-dev,
-            liboce-visualization-dev,
             libopenmpi-dev | libmpich-dev,
             libscalapack-mpi-dev,
             libsis-jhdf5-java,
             libspfft-dev,
-            libssm-dev,
             libsymspg-dev,
             libufo-dev,
             libxc-dev,
             netcdf-doc,
             pyfai,
             python3-binoculars,
-            python3-cctbx,
             python3-cif2cell,
             python3-fabio,
             python3-gpyfft,
             python3-nxs,
             python3-periodictable,
             python3-pycodcif,
-            python3-pyfftw,
             python3-qutip,
             python3-sasdata,
             python3-sasmodels,
             r-cran-rnetcdf,
             science-mathematics-dev,
-            ufo-filters,
-            vecgeom-dev
+            ufo-filters
 Suggests: gsl-doc-info,
           gsl-doc-pdf,
           gsl-ref-html | gsl-ref-psdoc,
           libcblas-dev,
+          libccp4-dev,
+          libcctbx-dev,
+          libclipper-dev,
           libcod-precision-perl,
           libfeel++-dev,
           libfftw3-doc,
+          libhepmc3-dev,
+          liboce-ocaf-dev,
+          liboce-visualization-dev,
           libpspio-dev,
           libroot-math-mlp-dev,
           libroot-montecarlo-vmc-dev,
           libroot-tmva-dev,
+          libssm-dev,
           oce-draw,
+          python3-cctbx,
           python3-h5py,
           python3-netcdf4,
+          python3-pyfftw,
           python3-threadpoolctl,
           root-system,
           scalapack-doc,
+          vecgeom-dev,
           wannier90-1-dev
 Description: Debian Science Nanoscale Physics development packages
  This metapackage will install Debian Science packages which might be
@@ -2023,10 +2026,8 @@ Depends: ${misc:Depends},
          science-tasks (= ${source:Version})
 Recommends: amide,
             dicom3tools,
-            dicomnifti,
             medcon,
             minc-tools,
-            mriconvert,
             mricron,
             nifti-bin,
             praat,
@@ -2034,8 +2035,6 @@ Recommends: amide,
             python3-dipy,
             python3-nibabel,
             python3-nipy,
-            python3-nipype,
-            python3-nitime,
             python3-pydicom,
             python3-pyxnat,
             python3-statsmodels,
@@ -2046,6 +2045,7 @@ Suggests: afni,
           caret,
           connectomeviewer,
           debruijn,
+          dicomnifti,
           eeglab,
           fieldtrip,
           freesurfer,
@@ -2057,11 +2057,14 @@ Suggests: afni,
           lipsia,
           mni-autoreg,
           mni-n3,
+          mriconvert,
           nifti2dicom,
           openmeeg-tools,
           pysurfer,
           python-mvpa2,
           python3-bioxtasraw,
+          python3-nipype,
+          python3-nitime,
           qnifti2dicom,
           science-psychophysics,
           science-typesetting,
@@ -2147,19 +2150,13 @@ Recommends: admesh,
             python3-bitstring,
             python3-csa,
             python3-deap,
-            python3-escript | python3-escript-mpi,
             python3-guiqwt,
             python3-lmfit,
             python3-matplotlib,
             python3-numpy,
-            python3-ppl,
-            python3-pysph,
             python3-pyswarms,
-            python3-resampy,
             python3-rioxarray,
             python3-scipy,
-            python3-sfepy,
-            python3-sparse,
             python3-tables,
             python3-xarray,
             pyzo,
@@ -2212,11 +2209,17 @@ Suggests: calculix-ccx-doc,
           python3-compyle,
           python3-cyarray,
           python3-dbfread,
+          python3-escript | python3-escript-mpi,
           python3-lazyarray,
           python3-leather,
           python3-libpysal,
           python3-numcodecs,
+          python3-ppl,
           python3-pydap,
+          python3-pysph,
+          python3-resampy,
+          python3-sfepy,
+          python3-sparse,
           python3-spyder-kernels,
           python3-spyder-line-profiler,
           python3-spyder-memory-profiler,
@@ -2245,8 +2248,6 @@ Depends: ${misc:Depends},
          science-tasks (= ${source:Version})
 Recommends: abinit | mpqc | psi3,
             axiom,
-            cadabra,
-            cp2k,
             drawxtl,
             etsf-io,
             feynmf,
@@ -2257,7 +2258,6 @@ Recommends: abinit | mpqc | psi3,
             gwyddion,
             maxima,
             meshlab,
-            oce-draw,
             openfoam,
             opticalraytracer,
             pymca,
@@ -2266,13 +2266,13 @@ Recommends: abinit | mpqc | psi3,
             quantum-espresso,
             science-electronics,
             science-numericalcomputation,
-            siconos,
-            siconos-mechanics-tools,
             toulbar2,
             v-sim
 Suggests: blzpack,
+          cadabra,
           cernlib,
           clhep,
+          cp2k,
           espresso++,
           evolver-ogl | evolver-nox,
           fdmnes,
@@ -2286,6 +2286,7 @@ Suggests: blzpack,
           libroot-math-mlp-dev,
           libroot-montecarlo-vmc-dev,
           libroot-tmva-dev,
+          oce-draw,
           octaviz,
           openctm-tools,
           openmx,
@@ -2296,6 +2297,8 @@ Suggests: blzpack,
           root-system,
           science-mathematics,
           science-statistics,
+          siconos,
+          siconos-mechanics-tools,
           spis,
           tessa | tessa-mpi
 Description: Debian Science Physics packages
@@ -2309,8 +2312,7 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: fenics,
-            fftw-dev,
+Recommends: fftw-dev,
             libasl-dev,
             libbasix-dev,
             libdeal.ii-dev,
@@ -2319,7 +2321,6 @@ Recommends: fenics,
             libfftw3-dev,
             libopenctm-dev,
             libp4est-dev,
-            libplb-dev,
             libspfft-dev,
             libxray-absorption-perl,
             libxray-scattering-perl,
@@ -2327,7 +2328,6 @@ Recommends: fenics,
             pyfai,
             python3-basix,
             python3-dmsh,
-            python3-dolfin,
             python3-dolfinx,
             python3-ffcx,
             python3-gpyfft,
@@ -2335,13 +2335,13 @@ Recommends: fenics,
             python3-meshplex,
             python3-meshzoo,
             python3-multipletau,
-            python3-pyfftw,
             python3-pygalmesh,
             python3-pyode,
             python3-quantities,
             sfftw-dev,
             trilinos-all-dev
-Suggests: libfeel++-dev,
+Suggests: fenics,
+          libfeel++-dev,
           libnfft3-dev,
           libopm-common-dev,
           libopm-grid-dev,
@@ -2349,9 +2349,12 @@ Suggests: libfeel++-dev,
           libopm-models-dev,
           libopm-simulators-dev,
           libopm-upscaling-dev,
+          libplb-dev,
           libtriangle-dev,
+          python3-dolfin,
           python3-opm-common,
           python3-opm-simulators,
+          python3-pyfftw,
           python3-pynfft
 Description: Debian Science Physics-dev packages
  This metapackage will install Debian Science packages which might be
@@ -2380,9 +2383,9 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: octave-psychtoolbox-3
-Suggests: psychopy,
-          science-neuroscience-cognitive,
+Recommends: octave-psychtoolbox-3,
+            psychopy
+Suggests: science-neuroscience-cognitive,
           visionegg
 Description: Debian Science packages for Psychophysics
  This metapackage will install Debian packages which might be useful for
@@ -2407,9 +2410,7 @@ Recommends: aseba,
             catkin-tools,
             collada-urdf-tools,
             joint-state-publisher,
-            jskeus,
             liburdfdom-tools,
-            morse-simulator,
             mrgingham,
             octomap-tools,
             octovis,
@@ -2431,7 +2432,9 @@ Suggests: arduino-ctags,
           gazebo9,
           gnuplot,
           joint-state-publisher-gui,
+          jskeus,
           libcoin-runtime,
+          morse-simulator,
           octave,
           ompl-demos,
           openhrp,
@@ -2458,7 +2461,6 @@ Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
 Recommends: ignition-tools,
-            jskeus-dev,
             libapriltag-dev,
             libccd-dev,
             libcomedi-dev,
@@ -2505,7 +2507,8 @@ Recommends: ignition-tools,
             ros-perception-dev,
             ros-simulators-dev,
             vcstool
-Suggests: libcnoid-dev,
+Suggests: jskeus-dev,
+          libcnoid-dev,
           libcv-dev,
           libelas-dev,
           libgazebo-dev,
@@ -2544,14 +2547,8 @@ Recommends: calculix-ccx,
             occt-draw,
             occt-misc,
             openfoam,
-            pysph-viewer,
             python3-deap,
-            python3-escript | python3-escript-mpi,
-            python3-pysph,
             python3-qutip,
-            python3-sfepy,
-            siconos,
-            siconos-mechanics-tools,
             sumo,
             tkgate,
             yade
@@ -2570,10 +2567,16 @@ Suggests: calculix-ccx-doc,
           libopm-models-dev,
           libopm-simulators-dev,
           libopm-upscaling-dev,
+          pysph-viewer,
+          python3-escript | python3-escript-mpi,
           python3-opm-common,
           python3-opm-simulators,
+          python3-pysph,
           python3-pyswarms,
-          python3-woo
+          python3-sfepy,
+          python3-woo,
+          siconos,
+          siconos-mechanics-tools
 Description: Debian Science Simulation packages
  This metapackage will install Debian Science packages that are
  used to do simulations in different fields of science.
@@ -2593,6 +2596,7 @@ Recommends: apophenia-bin,
             psignifit,
             pspp,
             python3-bayespy,
+            python3-hmmlearn,
             python3-openturns,
             python3-pandas,
             python3-persalys,
@@ -2800,7 +2804,6 @@ Recommends: auctex,
             python3-pybtex-docutils,
             python3-sphinxcontrib.bibtex,
             r-cran-knitr,
-            sagetex,
             setzer,
             sketch,
             texlive,
@@ -2829,6 +2832,7 @@ Suggests: bibus,
           r-cran-shape,
           r-cran-xtable,
           referencer,
+          sagetex,
           svgtoipe,
           tellico,
           texlive-math-extra,
@@ -2846,14 +2850,10 @@ Architecture: all
 Depends: ${misc:Depends},
          science-config (= ${source:Version}),
          science-tasks (= ${source:Version})
-Recommends: 3depict,
-            camv-rnd,
-            ctioga2,
+Recommends: ctioga2,
             feedgnuplot,
             fityk,
-            g3data,
             geg,
-            gfsview,
             giza-dev,
             gle-graphics,
             gmsh,
@@ -2868,12 +2868,8 @@ Recommends: 3depict,
             labplot,
             libgnuplot-iostream-dev,
             lybniz,
-            mathgl,
             matlab2tikz,
             mayavi2,
-            open3d-gui,
-            open3d-tools,
-            paraview,
             pdl,
             python3-gnuplot,
             python3-guiqwt,
@@ -2883,15 +2879,17 @@ Recommends: 3depict,
             r-cran-sjplot,
             solvespace,
             trend,
-            tulip,
-            udav,
             veusz,
             vistrails,
             yorick
-Suggests: cassandra,
+Suggests: 3depict,
+          camv-rnd,
+          cassandra,
           circos,
           circos-tools,
           findimagedupes,
+          g3data,
+          gfsview,
           ifrit,
           jeuclid-mathviewer,
           libcoin-dev,
@@ -2905,8 +2903,12 @@ Suggests: cassandra,
           libvtk9-dev,
           libvtk9-java,
           libvtk9-qt-dev,
+          mathgl,
           med-imaging,
+          open3d-gui,
+          open3d-tools,
           ovito,
+          paraview,
           pgfplots,
           pgplot5,
           plotdrop,
@@ -2927,6 +2929,8 @@ Suggests: cassandra,
           rlplot,
           scidavis,
           texlive-pictures,
+          tulip,
+          udav,
           visit,
           vtk9-examples
 Description: Debian Science data visualisation packages
@@ -2952,14 +2956,12 @@ Recommends: gnudatalanguage,
             libgnuplot-iostream-dev,
             libgtkdatabox-dev,
             libgts-dev,
-            libopen3d-dev,
             liborigin2-dev,
             libplplot-dev,
             libqglviewer-dev-qt5,
             libqwtplot3d-qt5-dev,
             libslvs1-dev,
             libsoqt520-dev,
-            libtulip-dev,
             libvtk9-dev,
             libvtk9-java,
             libvtk9-qt-dev,
@@ -2968,11 +2970,9 @@ Recommends: gnudatalanguage,
             python3-gnuplotlib,
             python3-matplotlib,
             python3-matplotlib-venn,
-            python3-open3d,
             python3-pivy,
             python3-plplot-qt,
             python3-qwt,
-            python3-qwt3d-qt5,
             python3-skimage,
             python3-skimage-lib,
             python3-vedo,
@@ -2983,9 +2983,16 @@ Suggests: libcollada-dom2.4-dp-dev,
           libgli-dev,
           libgrits-dev,
           libgtkdataboxmm-dev,
+          libopen3d-dev,
           libqglviewer-dev,
           libqtexengine-dev,
+          libtulip-dev,
+          python3-gneiss,
+          python3-holoviews,
+          python3-hvplot,
+          python3-open3d,
           python3-opentsne,
+          python3-qwt3d-qt5,
           python3-symfit
 Description: Debian Science development of visualisation applications
  This metapackage will install Debian Science packages related to the
@@ -3003,13 +3010,13 @@ Recommends: capsule-nextflow,
             gearman,
             gearman-tools,
             make,
-            python3-nipype,
             python3-wdlparse,
             snakemake,
             toil
 Suggests: cwlformat,
           libbenchmark-tools,
-          pegasus-wms
+          pegasus-wms,
+          python3-nipype
 Description: workflow management systems useful for scientific research
  This task lists some packages providing workflow management
  systems useful for scientific research.


=====================================
tasks/geography
=====================================
@@ -63,7 +63,7 @@ Why: Hmmm, was there any package?  I just can find
   http://wiki.openstreetmap.org/index.php/Osmarender
   but no download information etc.
 
-Recommends: r-cran-sp, r-cran-maptools, r-cran-mapdata, r-cran-mapproj, r-cran-maps, r-cran-fields, r-cran-raster
+Recommends: r-cran-sp, r-cran-mapdata, r-cran-mapproj, r-cran-maps, r-cran-fields, r-cran-raster
 
 Recommends: pgadmin3
 



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