[med-svn] r23 - trunk/packages/dialign/trunk/debian

[Charles Plessy]

Author: charles-guest
Date: 2006-04-19 15:14:17 +0000 (Wed, 19 Apr 2006)
New Revision: 23

Modified:
   trunk/packages/dialign/trunk/debian/BUGS
   trunk/packages/dialign/trunk/debian/dialign2-2.1.xml
   trunk/packages/dialign/trunk/debian/manpages
   trunk/packages/dialign/trunk/debian/rules
Log:
minor work on the manpage, new entry in the BUGS file

Modified: trunk/packages/dialign/trunk/debian/BUGS
===================================================================
--- trunk/packages/dialign/trunk/debian/BUGS	2006-04-19 15:13:37 UTC (rev 22)
+++ trunk/packages/dialign/trunk/debian/BUGS	2006-04-19 15:14:17 UTC (rev 23)
@@ -1 +1,3 @@
 The manpage has an extra AUTHORS section, added by the xsl stylesheet.
+
+The licence statement of the original package is somewhat unclear.

Modified: trunk/packages/dialign/trunk/debian/dialign2-2.1.xml
===================================================================
--- trunk/packages/dialign/trunk/debian/dialign2-2.1.xml	2006-04-19 15:13:37 UTC (rev 22)
+++ trunk/packages/dialign/trunk/debian/dialign2-2.1.xml	2006-04-19 15:14:17 UTC (rev 23)
@@ -1,20 +1,15 @@
-
+<?xml version="1.0" encoding="iso-8859-1"?>
 <!DOCTYPE refentry PUBLIC "-//OASIS//DTD DocBook XML V4.2//EN"
-"http://www.oasis-open.org/docbook/xml/4.2/docbookx.dtd" [
-
+"/usr/share/sgml/docbook/dtd/xml/4.2/docbookx.dtd" [
   <!-- Fill in your name for FIRSTNAME and SURNAME. -->
   <!ENTITY dhfirstname "<firstname>Charles</firstname>">
   <!ENTITY dhsurname   "<surname>Plessy</surname>">
-  <!-- Please adjust the date whenever revising the manpage. -->
   <!ENTITY dhdate      "<date>avril  9, 2006</date>">
-  <!-- SECTION should be 1-8, maybe w/ subsection other parameters are
-       allowed: see man(7), man(1). -->
   <!ENTITY dhsection   "<manvolnum>1</manvolnum>">
   <!ENTITY dhemail     "<email>charles-debian-nospam at plessy.org</email>">
   <!ENTITY dhusername  "Charles Plessy">
   <!ENTITY dhucpackage "<refentrytitle>DIALIGN</refentrytitle>">
   <!ENTITY dhpackage   "dialign2-2">
-
   <!ENTITY debian      "<productname>Debian</productname>">
   <!ENTITY gnu         "<acronym>GNU</acronym>">
   <!ENTITY gpl         "&gnu; <acronym>GPL</acronym>">
@@ -62,7 +57,7 @@
     alignments from gapfree pairs of similar segments of the
     sequences. If (possibly) coding nucleic acid sequences are to be
     aligned, DIALIGN optionally translates the compared `nucleic acid
-    segments' to `peptide segments' according to the genetic code &ndash;
+    segments' to `peptide segments' according to the genetic code --
     without presupposing any of the three possible reading frames, so
     all combinations of reading frames get checked for significant
     similarity.</para>
@@ -300,7 +295,7 @@
         <term><option>-nta</option>
         </term>
         <listitem>
-          <para>`No textual alignment'. Textual alignment suppressed. This option makes sense if other output files are of intrest &mdash; e.g. the fragment files created with <option>-ff</option>, <option>-fop</option>, <option>-fsm</option> or <option>-lo</option>.</para>
+          <para>`No textual alignment'. Textual alignment suppressed. This option makes sense if other output files are of intrest -- e.g. the fragment files created with <option>-ff</option>, <option>-fop</option>, <option>-fsm</option> or <option>-lo</option>.</para>
         </listitem>
       </varlistentry>
 

Modified: trunk/packages/dialign/trunk/debian/manpages
===================================================================
--- trunk/packages/dialign/trunk/debian/manpages	2006-04-19 15:13:37 UTC (rev 22)
+++ trunk/packages/dialign/trunk/debian/manpages	2006-04-19 15:14:17 UTC (rev 23)
@@ -1 +1 @@
-dialign2-2.1
+debian/dialign2-2.1

Modified: trunk/packages/dialign/trunk/debian/rules
===================================================================
--- trunk/packages/dialign/trunk/debian/rules	2006-04-19 15:13:37 UTC (rev 22)
+++ trunk/packages/dialign/trunk/debian/rules	2006-04-19 15:14:17 UTC (rev 23)
@@ -29,7 +29,7 @@
 build-stamp: 
 	dh_testdir
 	$(MAKE) -C src
-	xsltproc -''-nonet /usr/share/sgml/docbook/stylesheet/xsl/nwalsh/manpages/docbook.xsl debian/dialign2-2.1.xml
+	xsltproc -o debian/ -''-nonet /usr/share/sgml/docbook/stylesheet/xsl/nwalsh/manpages/docbook.xsl debian/dialign2-2.1.xml
 	touch build-stamp
 
 clean: clean-patched unpatch
@@ -39,9 +39,7 @@
 	dh_testroot
 	rm -f build-stamp
 	find src/ -name '*.o' -exec rm {} \;
-	find src/ -name dialign2-2 -exec rm {} \;
-	find . -name dialign2-2.1 -exec rm {} \;
-	dh_clean 
+	dh_clean debian/dialign2-2.1 src/dialign2-2
 
 install: build
 	dh_testdir