[med-svn] r169 - in
trunk/packages/primer3/branches/upstream/current: . src test
test/primer_global_err
Charles Plessy
charles-guest at alioth.debian.org
Thu Dec 28 15:41:33 CET 2006
Author: charles-guest
Date: 2006-12-28 15:41:32 +0100 (Thu, 28 Dec 2006)
New Revision: 169
Modified:
trunk/packages/primer3/branches/upstream/current/README.primer3_1.0.1.txt
trunk/packages/primer3/branches/upstream/current/src/primer3_release.h
trunk/packages/primer3/branches/upstream/current/test/primer_boundary1_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_boundary_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_global_err/empty_1.out2
trunk/packages/primer3/branches/upstream/current/test/primer_internal1_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_internal_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary1_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary2_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_must_use_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_position_penalty_formatted_output
trunk/packages/primer3/branches/upstream/current/test/primer_task_formatted_output
Log:
Load /tmp/tmp.CeBYlR5864/primer3-1.0.1 into
trunk/packages/primer3/branches/upstream/current.
Modified: trunk/packages/primer3/branches/upstream/current/README.primer3_1.0.1.txt
===================================================================
--- trunk/packages/primer3/branches/upstream/current/README.primer3_1.0.1.txt 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/README.primer3_1.0.1.txt 2006-12-28 14:41:32 UTC (rev 169)
@@ -1,4 +1,4 @@
-primer3 release 1.0b
+primer3 release 1.0.1 (This version identical to 1.0b except version number.)
Copyright (c) 1996,1997,1998,1999,2000,2001,2004,2006
Whitehead Institute for Biomedical Research, Steve Rozen
@@ -47,7 +47,7 @@
All of these criteria are user-specifiable as constraints, and
some are specifiable as terms in an objective function that
-characterizes an optimal primer pair.
+characterizes an optimal primer pair.
Whitehead Institute for Biomedical Research provides a web-based
front end to Primer3 at
@@ -76,9 +76,9 @@
newlines get inserted into the source files. Instead, move the
distribution (primer3_<release>.tar.gz) to Unix, and then
-$ unzip primer3_1.0b.tar.gz
-$ tar xvf primer3_1.0b.tar
-$ cd primer3_1.0b/src
+$ unzip primer3_1.0.1.tar.gz
+$ tar xvf primer3_1.0.1.tar
+$ cd primer3_1.0.1/src
If you do not use gcc, modify the makefile to
use your (ANSI) C compiler and appropriate
Modified: trunk/packages/primer3/branches/upstream/current/src/primer3_release.h
===================================================================
--- trunk/packages/primer3/branches/upstream/current/src/primer3_release.h 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/src/primer3_release.h 2006-12-28 14:41:32 UTC (rev 169)
@@ -33,6 +33,7 @@
#ifndef RELEASE_H
#define RELEASE_H 1
-static const char * pr_release = "primer3 release 1.0b";
-/* This is a beta release. */
+static const char * pr_release = "primer3 release 1.0.1";
+/* This is a beta release, identical to release 1.0b
+ except for version number */
#endif
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_boundary1_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_boundary1_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_boundary1_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -26,7 +26,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_01
@@ -57,7 +57,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_02
@@ -88,7 +88,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_03
@@ -112,7 +112,7 @@
Right 4 3 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, unacceptable product size 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_04
@@ -136,7 +136,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, unacceptable product size 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_05
@@ -167,7 +167,7 @@
Right 5 3 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 3, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_06
@@ -191,7 +191,7 @@
Right 5 5 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_07
@@ -223,7 +223,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_08
@@ -251,7 +251,7 @@
Right 6 5 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_09
@@ -279,7 +279,7 @@
Right 5 5 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_10
@@ -303,7 +303,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -334,7 +334,7 @@
Right 5 2 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 3, unacceptable product size 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -358,7 +358,7 @@
Right 5 2 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_12
@@ -389,7 +389,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_13
@@ -420,7 +420,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_14
@@ -444,7 +444,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_15
@@ -475,7 +475,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_16
@@ -499,7 +499,7 @@
Right 5 4 0 0 1 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_17
@@ -531,7 +531,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_18
@@ -559,7 +559,7 @@
Right 1 1 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_19
@@ -591,7 +591,7 @@
Right 1 1 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_21
@@ -624,7 +624,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_22
@@ -653,7 +653,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_23
@@ -682,7 +682,7 @@
Right 2 2 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_24
@@ -711,7 +711,7 @@
Right 2 2 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_25
@@ -744,7 +744,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_26
@@ -773,7 +773,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_27
@@ -802,7 +802,7 @@
Right 5 4 1 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_28
@@ -831,7 +831,7 @@
Right 5 4 1 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_29
@@ -864,7 +864,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_30
@@ -897,7 +897,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_31
@@ -926,7 +926,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_32
@@ -959,7 +959,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_33
@@ -988,7 +988,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_34
@@ -1017,7 +1017,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_35
@@ -1046,7 +1046,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_36
@@ -1079,7 +1079,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_37
@@ -1108,7 +1108,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_37
@@ -1137,7 +1137,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_38
@@ -1166,7 +1166,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_39
@@ -1199,7 +1199,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_40
@@ -1232,7 +1232,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_41
@@ -1258,7 +1258,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_42
@@ -1291,7 +1291,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_43
@@ -1320,7 +1320,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_44
@@ -1353,7 +1353,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_45
@@ -1386,7 +1386,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_46
@@ -1415,7 +1415,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_47
@@ -1448,7 +1448,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_48
@@ -1477,7 +1477,7 @@
Right 5 4 0 0 0 1 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_49
@@ -1510,7 +1510,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_50
@@ -1539,7 +1539,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_51
@@ -1572,7 +1572,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_52
@@ -1605,7 +1605,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_53
@@ -1634,7 +1634,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, tm diff too large 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_54
@@ -1669,7 +1669,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_55
@@ -1702,7 +1702,7 @@
Intl 0 0 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR poly_x_2
@@ -1765,7 +1765,7 @@
Intl 1585 0 0 0 0 0 0 0 0 0 0 0 1585
Pair Stats:
considered 72, unacceptable product size 52, ok 20
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR poly_x_3
@@ -1794,7 +1794,7 @@
Intl 187 0 0 0 0 0 0 0 0 0 187 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_59
@@ -1827,7 +1827,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_60
@@ -1853,7 +1853,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_61
@@ -1893,7 +1893,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_63
@@ -1923,7 +1923,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_64
@@ -1963,7 +1963,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_66
@@ -1993,7 +1993,7 @@
Right 1 0 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_67
@@ -2025,7 +2025,7 @@
Right 6 5 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_68
@@ -2058,7 +2058,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_69
@@ -2084,7 +2084,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_70
@@ -2120,7 +2120,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_72
@@ -2150,7 +2150,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_73
@@ -2186,7 +2186,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_75
@@ -2216,7 +2216,7 @@
Right 0 0 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_76
@@ -2248,7 +2248,7 @@
Right 6 5 1 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_77
@@ -2282,7 +2282,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_78
@@ -2316,7 +2316,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_79
@@ -2350,7 +2350,7 @@
Right 6 5 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_80
@@ -2384,7 +2384,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_81
@@ -2418,7 +2418,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_82
@@ -2451,7 +2451,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_83
@@ -2480,7 +2480,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_84
@@ -2513,7 +2513,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_85
@@ -2546,7 +2546,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_86
@@ -2580,7 +2580,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_71
@@ -2616,7 +2616,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_72
@@ -2648,7 +2648,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 3, unacceptable product size 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_73
@@ -2676,7 +2676,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, unacceptable product size 2, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_74
@@ -2708,7 +2708,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_75
@@ -2740,7 +2740,7 @@
Right 2 1 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, unacceptable product size 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_76
@@ -2772,7 +2772,7 @@
Right 2 1 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, unacceptable product size 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_77
@@ -2813,7 +2813,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 2, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_78
@@ -2854,7 +2854,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 2, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_79
@@ -2895,7 +2895,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 1, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_80
@@ -2936,7 +2936,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 1, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_81
@@ -2968,7 +2968,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_82
@@ -2996,7 +2996,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, high any compl 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_83
@@ -3028,7 +3028,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_84
@@ -3056,7 +3056,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, high end compl 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_85
@@ -3088,7 +3088,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 200, ok 200
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_86
@@ -3122,7 +3122,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_87
@@ -3160,7 +3160,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_89
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_boundary_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_boundary_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_boundary_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -26,7 +26,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_01
@@ -57,7 +57,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_02
@@ -88,7 +88,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_03
@@ -112,7 +112,7 @@
Right 4 3 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, unacceptable product size 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_04
@@ -136,7 +136,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, unacceptable product size 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_05
@@ -167,7 +167,7 @@
Right 5 3 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 3, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_06
@@ -191,7 +191,7 @@
Right 5 5 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_07
@@ -223,7 +223,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_08
@@ -251,7 +251,7 @@
Right 6 5 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_09
@@ -279,7 +279,7 @@
Right 5 5 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_10
@@ -303,7 +303,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -334,7 +334,7 @@
Right 5 2 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 3, unacceptable product size 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -358,7 +358,7 @@
Right 5 2 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_12
@@ -389,7 +389,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_13
@@ -420,7 +420,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_14
@@ -444,7 +444,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_15
@@ -475,7 +475,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_16
@@ -499,7 +499,7 @@
Right 5 4 0 0 1 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_17
@@ -531,7 +531,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_18
@@ -559,7 +559,7 @@
Right 1 1 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_19
@@ -591,7 +591,7 @@
Right 1 1 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_21
@@ -624,7 +624,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_22
@@ -653,7 +653,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_23
@@ -682,7 +682,7 @@
Right 2 2 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_24
@@ -711,7 +711,7 @@
Right 2 2 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_25
@@ -744,7 +744,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_26
@@ -773,7 +773,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_27
@@ -802,7 +802,7 @@
Right 5 4 1 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_28
@@ -831,7 +831,7 @@
Right 5 4 1 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_29
@@ -864,7 +864,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_30
@@ -897,7 +897,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_31
@@ -926,7 +926,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_32
@@ -959,7 +959,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_33
@@ -988,7 +988,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_34
@@ -1017,7 +1017,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_35
@@ -1046,7 +1046,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_36
@@ -1079,7 +1079,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_37
@@ -1108,7 +1108,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_37
@@ -1137,7 +1137,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_38
@@ -1166,7 +1166,7 @@
Right 5 4 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_39
@@ -1199,7 +1199,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_40
@@ -1232,7 +1232,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_41
@@ -1258,7 +1258,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_42
@@ -1291,7 +1291,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_43
@@ -1320,7 +1320,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_44
@@ -1353,7 +1353,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_45
@@ -1386,7 +1386,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_46
@@ -1415,7 +1415,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_47
@@ -1448,7 +1448,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_48
@@ -1477,7 +1477,7 @@
Right 5 4 0 0 0 1 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_49
@@ -1510,7 +1510,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_50
@@ -1539,7 +1539,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_51
@@ -1572,7 +1572,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_52
@@ -1605,7 +1605,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_53
@@ -1634,7 +1634,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, tm diff too large 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_54
@@ -1669,7 +1669,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_55
@@ -1702,7 +1702,7 @@
Intl 0 0 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR poly_x_2
@@ -1765,7 +1765,7 @@
Intl 1585 0 0 0 0 0 0 0 0 0 0 0 1585
Pair Stats:
considered 72, unacceptable product size 52, ok 20
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR poly_x_3
@@ -1794,7 +1794,7 @@
Intl 187 0 0 0 0 0 0 0 0 0 187 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_59
@@ -1827,7 +1827,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_60
@@ -1853,7 +1853,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_61
@@ -1893,7 +1893,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_63
@@ -1923,7 +1923,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_64
@@ -1963,7 +1963,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_66
@@ -1993,7 +1993,7 @@
Right 1 0 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_67
@@ -2025,7 +2025,7 @@
Right 6 5 0 1 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_68
@@ -2058,7 +2058,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_69
@@ -2084,7 +2084,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_70
@@ -2120,7 +2120,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_72
@@ -2150,7 +2150,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_73
@@ -2186,7 +2186,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_75
@@ -2216,7 +2216,7 @@
Right 0 0 0 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_76
@@ -2248,7 +2248,7 @@
Right 6 5 1 0 0 0 0 0 0 0 0 0 0
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_77
@@ -2282,7 +2282,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_78
@@ -2316,7 +2316,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_79
@@ -2350,7 +2350,7 @@
Right 6 5 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_80
@@ -2384,7 +2384,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_81
@@ -2418,7 +2418,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_82
@@ -2451,7 +2451,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_83
@@ -2480,7 +2480,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, no target 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_84
@@ -2513,7 +2513,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_85
@@ -2546,7 +2546,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_86
@@ -2580,7 +2580,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_71
@@ -2616,7 +2616,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_72
@@ -2648,7 +2648,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 3, unacceptable product size 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_73
@@ -2676,7 +2676,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, unacceptable product size 2, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_74
@@ -2708,7 +2708,7 @@
Right 3 2 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_75
@@ -2740,7 +2740,7 @@
Right 2 1 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, unacceptable product size 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_76
@@ -2772,7 +2772,7 @@
Right 2 1 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 2, unacceptable product size 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_77
@@ -2813,7 +2813,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 2, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_78
@@ -2854,7 +2854,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 2, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_79
@@ -2895,7 +2895,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 1, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_80
@@ -2936,7 +2936,7 @@
Right 28 26 0 0 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 4, unacceptable product size 1, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_81
@@ -2968,7 +2968,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_82
@@ -2996,7 +2996,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, high any compl 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_83
@@ -3028,7 +3028,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_84
@@ -3056,7 +3056,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, high end compl 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_85
@@ -3088,7 +3088,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 200, ok 200
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_86
@@ -3122,7 +3122,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_87
@@ -3160,7 +3160,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_89
@@ -3195,7 +3195,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_91
@@ -3219,7 +3219,7 @@
Right 10 9 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 0, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_92
@@ -3254,7 +3254,7 @@
Right 5 2 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 9, unacceptable product size 8, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_93
@@ -3289,7 +3289,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_94
@@ -3324,7 +3324,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_95
@@ -3359,7 +3359,7 @@
Right 5 4 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_96
@@ -3394,7 +3394,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_97
@@ -3429,7 +3429,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR test_098
@@ -3461,7 +3461,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR test_099
@@ -3485,7 +3485,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, high product Tm 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR test_100
@@ -3516,7 +3516,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR test_101
@@ -3548,7 +3548,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR test_102
@@ -3572,7 +3572,7 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, low product Tm 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR test_103
@@ -3603,6 +3603,6 @@
Right 5 0 0 0 0 0 0 0 0 0 0 0 5
Pair Stats:
considered 5, unacceptable product size 4, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_global_err/empty_1.out2
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_global_err/empty_1.out2 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_global_err/empty_1.out2 2006-12-28 14:41:32 UTC (rev 169)
@@ -32,7 +32,7 @@
USAGE: ../src/primer3_core [-format_output] [-2x_compat] [-strict_tags]
-This is primer3 (primer3 release 1.0b)
+This is primer3 (primer3 release 1.0.1)
Input must be provided on standard input.
For example:
$ primer3_core < my_input_file
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_internal1_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_internal1_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_internal1_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -33,7 +33,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 4, unacceptable product size 1, no internal oligo 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_01
@@ -71,7 +71,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 2, unacceptable product size 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_02
@@ -109,7 +109,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_05
@@ -147,7 +147,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 4, unacceptable product size 3, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -174,7 +174,7 @@
Intl 60 59 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 8, unacceptable product size 6, no internal oligo 2, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -219,7 +219,7 @@
Intl 60 52 0 0 0 0 0 0 0 0 0 0 8
Pair Stats:
considered 10, unacceptable product size 8, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_12
@@ -264,7 +264,7 @@
Intl 60 52 0 0 0 0 0 0 0 0 0 0 8
Pair Stats:
considered 10, unacceptable product size 8, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_13
@@ -302,7 +302,7 @@
Intl 60 23 0 0 0 0 0 0 0 0 0 0 37
Pair Stats:
considered 4, unacceptable product size 3, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_14
@@ -340,7 +340,7 @@
Intl 60 25 0 0 0 0 0 0 0 0 0 0 35
Pair Stats:
considered 6, unacceptable product size 5, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_15
@@ -378,7 +378,7 @@
Intl 60 25 0 0 0 0 0 0 0 0 0 0 35
Pair Stats:
considered 6, unacceptable product size 5, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_16
@@ -404,7 +404,7 @@
Intl 35 0 0 0 0 0 0 0 0 0 0 0 35
Pair Stats:
considered 4, no internal oligo 4, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_17
@@ -431,7 +431,7 @@
Intl 60 0 0 0 29 0 0 0 0 0 0 0 31
Pair Stats:
considered 16, unacceptable product size 4, no internal oligo 12, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_18
@@ -465,7 +465,7 @@
Intl 87 39 0 40 0 0 0 0 0 0 0 0 8
Pair Stats:
considered 81, unacceptable product size 49, no internal oligo 32, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_19
@@ -527,7 +527,7 @@
Intl 91 84 0 5 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 18, unacceptable product size 3, no internal oligo 8, ok 7
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_20
@@ -599,7 +599,7 @@
Intl 226 175 0 47 0 0 0 0 0 0 0 0 4
Pair Stats:
considered 23, no internal oligo 15, ok 8
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_21
@@ -662,7 +662,7 @@
Intl 152 57 0 0 0 0 1 93 0 0 0 0 1
Pair Stats:
considered 323, unacceptable product size 223, no internal oligo 87, ok 13
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_22
@@ -700,7 +700,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_23
@@ -743,7 +743,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_24
@@ -784,7 +784,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_25
@@ -827,7 +827,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_26
@@ -868,7 +868,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_27
@@ -903,7 +903,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, no internal oligo 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_28
@@ -938,7 +938,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, no internal oligo 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_29
@@ -979,7 +979,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_30
@@ -1020,7 +1020,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_31
@@ -1063,7 +1063,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_32
@@ -1106,7 +1106,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_33
@@ -1147,7 +1147,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_34
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_internal_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_internal_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_internal_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -33,7 +33,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 4, unacceptable product size 1, no internal oligo 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_01
@@ -71,7 +71,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 2, unacceptable product size 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_02
@@ -109,7 +109,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_05
@@ -147,7 +147,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 4, unacceptable product size 3, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -174,7 +174,7 @@
Intl 60 59 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 8, unacceptable product size 6, no internal oligo 2, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_11
@@ -219,7 +219,7 @@
Intl 60 52 0 0 0 0 0 0 0 0 0 0 8
Pair Stats:
considered 10, unacceptable product size 8, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_12
@@ -264,7 +264,7 @@
Intl 60 52 0 0 0 0 0 0 0 0 0 0 8
Pair Stats:
considered 10, unacceptable product size 8, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_13
@@ -302,7 +302,7 @@
Intl 60 23 0 0 0 0 0 0 0 0 0 0 37
Pair Stats:
considered 4, unacceptable product size 3, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_14
@@ -340,7 +340,7 @@
Intl 60 25 0 0 0 0 0 0 0 0 0 0 35
Pair Stats:
considered 6, unacceptable product size 5, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_15
@@ -378,7 +378,7 @@
Intl 60 25 0 0 0 0 0 0 0 0 0 0 35
Pair Stats:
considered 6, unacceptable product size 5, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_16
@@ -404,7 +404,7 @@
Intl 35 0 0 0 0 0 0 0 0 0 0 0 35
Pair Stats:
considered 4, no internal oligo 4, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_17
@@ -431,7 +431,7 @@
Intl 60 0 0 0 29 0 0 0 0 0 0 0 31
Pair Stats:
considered 16, unacceptable product size 4, no internal oligo 12, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_18
@@ -465,7 +465,7 @@
Intl 87 39 0 40 0 0 0 0 0 0 0 0 8
Pair Stats:
considered 81, unacceptable product size 49, no internal oligo 32, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_19
@@ -527,7 +527,7 @@
Intl 91 84 0 5 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 18, unacceptable product size 3, no internal oligo 8, ok 7
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_20
@@ -599,7 +599,7 @@
Intl 226 175 0 47 0 0 0 0 0 0 0 0 4
Pair Stats:
considered 23, no internal oligo 15, ok 8
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_21
@@ -662,7 +662,7 @@
Intl 152 57 0 0 0 0 1 93 0 0 0 0 1
Pair Stats:
considered 323, unacceptable product size 223, no internal oligo 87, ok 13
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_22
@@ -700,7 +700,7 @@
Intl 60 57 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_23
@@ -743,7 +743,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_24
@@ -784,7 +784,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_25
@@ -827,7 +827,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_26
@@ -868,7 +868,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_27
@@ -903,7 +903,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, no internal oligo 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_28
@@ -938,7 +938,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, no internal oligo 1, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_29
@@ -979,7 +979,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_30
@@ -1020,7 +1020,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_31
@@ -1063,7 +1063,7 @@
Intl 56 53 0 0 0 0 0 0 0 0 0 0 3
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_32
@@ -1106,7 +1106,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_33
@@ -1147,7 +1147,7 @@
Intl 56 53 0 1 0 0 0 0 0 0 0 0 2
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR boundary_test_34
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary1_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary1_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary1_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -39,7 +39,7 @@
Intl 163 0 0 0 0 0 0 0 0 0 121 0 0 42
Pair Stats:
considered 381, unacceptable product size 369, no internal oligo 11, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR pair_0
@@ -67,7 +67,7 @@
Intl 144 0 0 0 0 0 0 0 0 0 0 0 0 144
Pair Stats:
considered 32, unacceptable product size 32, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR pair_1
@@ -111,6 +111,6 @@
Intl 163 0 0 0 0 0 0 0 0 0 121 0 0 42
Pair Stats:
considered 6889, unacceptable product size 3403, no internal oligo 11, high mispriming library similarity 3474, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary2_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary2_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_boundary2_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -39,7 +39,7 @@
Intl 163 0 0 0 0 0 0 0 0 0 121 0 0 42
Pair Stats:
considered 381, unacceptable product size 369, no internal oligo 11, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR pair_0
@@ -67,6 +67,6 @@
Intl 144 0 0 0 0 0 0 0 0 0 0 0 0 144
Pair Stats:
considered 32, unacceptable product size 32, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_mispriming_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -64,7 +64,7 @@
Right 1012 19 0 58 25 0 0 702 0 0 0 0 0 208
Pair Stats:
considered 23, unacceptable product size 17, ok 6
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR exon2
@@ -130,7 +130,7 @@
Right 827 0 0 72 314 0 236 0 0 0 0 0 0 205
Pair Stats:
considered 14, unacceptable product size 8, ok 6
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR exon2
@@ -204,7 +204,7 @@
Intl 3079 0 0 0 316 0 517 178 0 0 0 23 0 2045
Pair Stats:
considered 14, unacceptable product size 8, ok 6
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR exon1
@@ -281,7 +281,7 @@
Intl 3237 27 0 0 32 0 23 1880 0 0 0 0 0 1275
Pair Stats:
considered 29, unacceptable product size 18, high mispriming library similarity 2, ok 9
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR exon2
@@ -355,7 +355,7 @@
Intl 3079 0 0 0 316 0 517 178 0 0 0 23 0 2045
Pair Stats:
considered 116, unacceptable product size 66, tm diff too large 5, high mispriming library similarity 38, ok 7
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR exon2
@@ -401,6 +401,6 @@
Intl 3079 0 0 0 316 0 517 178 0 0 0 23 0 2045
Pair Stats:
considered 12459, unacceptable product size 6872, tm diff too large 4075, high mispriming library similarity 1512, ok 0
-primer3 release 1.0b
+primer3 release 1.0.1
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_must_use_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_must_use_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_must_use_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -34,7 +34,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR high_tm
@@ -74,7 +74,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR high_tm_and_self_any
@@ -114,7 +114,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR high_tm_and_self_any_and_target
@@ -154,7 +154,7 @@
Right 3 0 0 0 0 0 0 2 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR high_tm_and_self_any_and_excl_region
@@ -196,7 +196,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR high_tm_and_self_any_and_incl_region
@@ -236,7 +236,7 @@
Statistics
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR left_high_tm_and_self_any_and_right_bad_gc
@@ -272,7 +272,7 @@
Statistics
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR left_high_tm_and_self_any_and_right_bad_gc_and_target
@@ -308,7 +308,7 @@
Statistics
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR internal_too_short
@@ -351,7 +351,7 @@
Statistics
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR internal_too_cold
@@ -390,7 +390,7 @@
Statistics
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR internal_too_cold2
@@ -433,7 +433,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR mispriming
@@ -476,6 +476,6 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_position_penalty_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_position_penalty_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_position_penalty_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -60,7 +60,7 @@
Right 3504 0 289 0 0 0 655 1723 0 0 0 0 0 837
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR AT3_X2
@@ -143,7 +143,7 @@
Right 6657 0 289 0 114 0 1327 3439 0 2 0 19 0 1467
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR AT3_X3
@@ -217,7 +217,7 @@
Right 5254 0 289 0 103 0 1706 1557 0 0 0 0 0 1599
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR AT3_X3'
@@ -288,7 +288,7 @@
Right 4294 0 289 0 209 0 512 2472 0 0 0 25 0 787
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR AT3_X4
@@ -371,7 +371,7 @@
Right 7004 0 289 0 0 0 1493 3474 0 0 0 0 0 1748
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR AT3_X5
@@ -439,7 +439,7 @@
Right 3744 0 289 0 0 0 874 1504 0 8 0 0 0 1069
Pair Stats:
considered 21, high end compl 20, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR AT3_X6
@@ -510,7 +510,7 @@
Right 4414 0 289 0 103 0 1578 1288 0 0 14 0 0 1142
Pair Stats:
considered 3, high end compl 2, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X1
@@ -578,7 +578,7 @@
Right 4274 0 289 0 0 0 375 2978 0 0 0 0 0 632
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X2
@@ -640,7 +640,7 @@
Right 2584 0 289 0 1 0 95 1901 0 0 0 0 0 298
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X3
@@ -711,7 +711,7 @@
Right 4444 0 289 0 0 0 400 2950 0 0 0 0 0 805
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X4
@@ -779,7 +779,7 @@
Right 3804 0 289 0 0 0 348 2565 0 0 0 0 0 602
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X5
@@ -847,7 +847,7 @@
Right 3974 0 289 0 34 0 889 1971 0 0 0 0 0 791
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X6
@@ -915,7 +915,7 @@
Right 3794 0 289 0 0 0 274 2616 2 3 0 0 0 610
Pair Stats:
considered 40, high end compl 38, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X7
@@ -983,7 +983,7 @@
Right 3593 0 289 0 15 0 752 1654 0 0 0 22 0 861
Pair Stats:
considered 102, high any compl 81, high end compl 20, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X8
@@ -1051,7 +1051,7 @@
Right 3861 0 289 0 8 0 269 2629 0 0 0 22 0 644
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X9
@@ -1116,7 +1116,7 @@
Right 4589 0 154 0 0 0 711 2838 0 0 0 0 0 886
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X10
@@ -1169,7 +1169,7 @@
Right 1498 0 226 0 0 0 153 792 0 0 0 22 0 305
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X11
@@ -1222,7 +1222,7 @@
Right 2741 0 116 0 42 0 336 1775 0 0 0 0 0 472
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X12
@@ -1290,7 +1290,7 @@
Right 3774 0 289 0 0 0 619 2094 0 0 0 0 0 772
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X13
@@ -1355,7 +1355,7 @@
Right 3434 0 289 0 0 0 586 1682 0 0 0 0 0 877
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X14
@@ -1411,7 +1411,7 @@
Right 1454 0 289 0 0 0 83 882 0 0 0 0 0 200
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X15
@@ -1476,7 +1476,7 @@
Right 3758 0 245 0 1 0 356 2464 0 0 3 22 0 667
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR CETP_X16
@@ -1544,7 +1544,7 @@
Right 3637 0 289 0 3 0 299 2316 0 0 0 25 0 705
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X1
@@ -1612,7 +1612,7 @@
Right 4194 0 289 0 8 0 235 3082 0 0 2 0 0 578
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X2
@@ -1683,7 +1683,7 @@
Right 4704 0 289 0 96 0 191 3583 0 4 0 0 0 541
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X3
@@ -1748,7 +1748,7 @@
Right 3344 0 289 0 1 0 379 2040 0 0 0 0 0 635
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X4
@@ -1813,7 +1813,7 @@
Right 3497 0 289 0 107 0 371 2132 0 0 0 18 0 580
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X5
@@ -1881,7 +1881,7 @@
Right 4154 0 289 0 14 0 310 2916 0 0 0 0 0 625
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X6
@@ -1952,7 +1952,7 @@
Right 4464 0 289 0 40 0 325 3245 0 0 0 0 0 565
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X7
@@ -2032,7 +2032,7 @@
Right 5938 0 289 0 51 0 580 3983 0 0 0 44 0 991
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X8
@@ -2103,7 +2103,7 @@
Right 4384 0 289 0 97 0 244 3201 0 0 0 0 0 553
Pair Stats:
considered 14, high end compl 12, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X9
@@ -2174,7 +2174,7 @@
Right 4248 0 289 0 80 0 415 2693 0 0 0 23 0 748
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X10
@@ -2245,7 +2245,7 @@
Right 4621 0 289 0 8 0 474 3110 0 0 0 22 0 718
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X11
@@ -2316,7 +2316,7 @@
Right 4762 0 289 0 176 0 739 2528 0 0 0 13 0 1017
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X12
@@ -2390,7 +2390,7 @@
Right 4914 0 289 0 83 0 976 2660 0 0 0 0 0 906
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X13
@@ -2458,7 +2458,7 @@
Right 3804 0 289 0 0 0 873 1715 0 5 0 0 0 922
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2_X14
@@ -2526,7 +2526,7 @@
Right 3944 0 289 0 74 0 898 1848 0 2 0 0 0 833
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2R_X1
@@ -2576,7 +2576,7 @@
Right 951 0 226 0 209 0 0 510 0 0 0 0 0 6
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2R_X2-seg1
@@ -2644,7 +2644,7 @@
Right 6710 0 0 0 4 0 1540 3376 0 0 2 0 0 1788
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F2R_X2-seg2
@@ -2715,7 +2715,7 @@
Right 6997 0 0 0 109 0 2483 2360 0 0 0 22 0 2023
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F3_X1
@@ -2783,7 +2783,7 @@
Right 4094 0 289 0 716 0 101 2783 0 0 0 0 0 205
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F3_X2
@@ -2851,7 +2851,7 @@
Right 4214 0 289 0 232 0 1968 682 0 0 0 0 0 1043
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F3_X3
@@ -2925,7 +2925,7 @@
Right 5005 0 289 0 185 0 1231 1945 0 0 0 11 0 1344
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F3_X4
@@ -2996,7 +2996,7 @@
Right 4770 0 289 0 176 0 1330 1913 0 0 0 21 0 1041
Pair Stats:
considered 36, high end compl 33, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F3_X5
@@ -3067,7 +3067,7 @@
Right 4397 0 289 0 28 0 1323 1565 0 4 0 44 0 1144
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F3_X6
@@ -3138,7 +3138,7 @@
Right 4311 0 289 0 51 0 1766 895 0 0 0 22 0 1288
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F5_X10
@@ -3188,7 +3188,7 @@
Right 2435 0 50 0 0 0 1068 632 0 0 0 0 0 685
Pair Stats:
considered 18, high end compl 16, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X1
@@ -3256,7 +3256,7 @@
Right 3734 0 289 0 17 0 289 2735 0 1 0 0 0 403
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X2
@@ -3324,7 +3324,7 @@
Right 3601 0 289 0 16 0 390 2278 0 0 0 22 0 606
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X2'
@@ -3395,7 +3395,7 @@
Right 4704 0 289 0 1078 0 138 2874 0 0 0 0 0 325
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X3
@@ -3460,7 +3460,7 @@
Right 3344 0 289 0 0 0 284 2312 8 13 7 0 0 431
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X4
@@ -3528,7 +3528,7 @@
Right 4234 0 289 0 81 0 378 2891 0 0 0 0 0 595
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X5
@@ -3599,7 +3599,7 @@
Right 4504 0 289 0 1 0 499 3030 0 0 2 0 0 683
Pair Stats:
considered 20, high any compl 8, high end compl 10, ok 2
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X6
@@ -3667,7 +3667,7 @@
Right 3894 0 289 0 11 0 463 2371 0 1 0 44 0 715
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X7
@@ -3738,7 +3738,7 @@
Right 4181 0 289 0 10 0 236 3155 0 5 0 22 0 464
Pair Stats:
considered 126, high any compl 28, high end compl 97, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR F7_X8
@@ -3830,7 +3830,7 @@
Right 9054 0 289 0 79 0 1105 6374 0 1 0 0 0 1206
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HCF2_X2
@@ -3940,7 +3940,7 @@
Right 12144 0 289 0 15 0 3651 4687 0 7 0 0 0 3495
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HCF2_X3
@@ -4017,7 +4017,7 @@
Right 5393 0 289 0 28 0 1331 2335 19 7 0 67 0 1317
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HCF2_X4
@@ -4088,7 +4088,7 @@
Right 4238 0 289 0 20 0 420 2770 0 0 0 44 0 695
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HCF2_X5
@@ -4195,7 +4195,7 @@
Right 11432 0 289 0 57 0 2518 5947 0 12 0 20 0 2589
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X1
@@ -4239,7 +4239,7 @@
Right 1490 0 65 0 0 0 478 584 0 0 0 0 0 363
Pair Stats:
considered 11, high end compl 10, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X2
@@ -4277,7 +4277,7 @@
Right 770 0 0 0 11 0 448 81 7 1 0 0 0 222
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X3
@@ -4315,7 +4315,7 @@
Right 530 0 0 0 1 0 416 4 0 0 0 0 0 109
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X4
@@ -4353,7 +4353,7 @@
Right 500 0 0 0 0 0 123 202 0 0 0 0 0 175
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X5
@@ -4391,7 +4391,7 @@
Right 710 0 0 0 0 0 202 248 0 1 1 0 0 258
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X6
@@ -4429,7 +4429,7 @@
Right 720 0 0 0 0 0 181 338 0 0 0 0 0 201
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X7
@@ -4467,7 +4467,7 @@
Right 820 0 0 0 3 0 237 349 0 0 0 0 0 231
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X8
@@ -4508,7 +4508,7 @@
Right 1260 0 0 0 0 0 530 315 0 0 20 0 0 395
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X9
@@ -4555,7 +4555,7 @@
Right 1977 0 0 0 0 0 1125 203 0 0 0 22 0 627
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X10
@@ -4593,7 +4593,7 @@
Right 550 0 0 0 0 0 227 116 0 0 0 0 0 207
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X11
@@ -4631,7 +4631,7 @@
Right 540 0 0 0 0 0 181 215 0 0 0 0 0 144
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X12
@@ -4675,7 +4675,7 @@
Right 1600 0 0 0 0 0 707 324 0 0 0 0 0 569
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X13
@@ -4716,7 +4716,7 @@
Right 1240 0 0 0 1 0 280 628 0 0 0 0 0 331
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X14
@@ -4757,7 +4757,7 @@
Right 1230 0 0 0 0 0 122 805 0 0 0 0 0 303
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X15
@@ -4795,7 +4795,7 @@
Right 710 0 0 0 0 0 172 343 0 0 0 0 0 195
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X16
@@ -4836,7 +4836,7 @@
Right 1360 0 0 0 0 0 616 248 0 1 0 0 0 495
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X17
@@ -4877,7 +4877,7 @@
Right 1060 0 0 0 1 0 217 601 0 0 0 0 0 241
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X18
@@ -4918,7 +4918,7 @@
Right 1240 0 0 0 18 0 504 411 0 0 0 0 0 307
Pair Stats:
considered 62, high end compl 59, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X19
@@ -4959,7 +4959,7 @@
Right 1200 0 0 0 0 0 167 784 0 0 0 0 0 249
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR HMGCR_X20
@@ -5000,6 +5000,6 @@
Right 1150 0 0 0 42 0 311 512 26 3 0 20 0 236
Pair Stats:
considered 1, ok 1
-primer3 release 1.0b
+primer3 release 1.0.1
Modified: trunk/packages/primer3/branches/upstream/current/test/primer_task_formatted_output
===================================================================
--- trunk/packages/primer3/branches/upstream/current/test/primer_task_formatted_output 2006-12-28 14:41:15 UTC (rev 168)
+++ trunk/packages/primer3/branches/upstream/current/test/primer_task_formatted_output 2006-12-28 14:41:32 UTC (rev 169)
@@ -44,7 +44,7 @@
Right 1 0 0 0 0 0 0 0 0 0 0 0 1
Pair Stats:
considered 3, ok 3
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR pcr_primers_and_io
@@ -113,7 +113,7 @@
Intl 393 280 0 0 0 0 30 46 0 0 3 0 34
Pair Stats:
considered 7, ok 7
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR left_only
@@ -152,7 +152,7 @@
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Left 1121 38 23 0 0 0 42 866 0 0 0 0 152
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR right_only
@@ -191,7 +191,7 @@
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Right 623 27 36 0 5 0 230 145 0 6 0 0 174
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR hyb_probe_only
@@ -228,7 +228,7 @@
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Intl 1040 27 0 33 0 0 44 804 0 0 0 0 132
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR left_only
@@ -253,7 +253,7 @@
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Left 1 0 0 0 0 0 0 0 0 0 0 0 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR right_only
@@ -278,7 +278,7 @@
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Left 1 0 0 0 0 0 0 0 0 0 0 0 1
-primer3 release 1.0b
+primer3 release 1.0.1
PRIMER PICKING RESULTS FOR hyb_probe_only
@@ -303,6 +303,6 @@
sid many tar excl bad GC too too any 3' poly end
ered Ns get reg GC% clamp low high compl compl X stab ok
Left 1 0 0 0 0 0 0 0 0 0 0 0 1
-primer3 release 1.0b
+primer3 release 1.0.1
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