[med-svn] r132 - trunk/packages/poa/trunk/debian
Charles Plessy
charles-guest at costa.debian.org
Tue Sep 26 09:14:20 UTC 2006
Author: charles-guest
Date: 2006-09-26 09:14:06 +0000 (Tue, 26 Sep 2006)
New Revision: 132
Modified:
trunk/packages/poa/trunk/debian/README.debian
trunk/packages/poa/trunk/debian/control
Log:
POA v2 ships a perl script which depends on NCBI blast
Modified: trunk/packages/poa/trunk/debian/README.debian
===================================================================
--- trunk/packages/poa/trunk/debian/README.debian 2006-09-26 06:48:06 UTC (rev 131)
+++ trunk/packages/poa/trunk/debian/README.debian 2006-09-26 09:14:06 UTC (rev 132)
@@ -1,11 +1,15 @@
poa for Debian
--------------
-POA needs a matrix file to operate. The one shipped in the sources of POA can
-be found at /usr/lib/poa/blosum80.mat
+POA needs a matrix file to operate. The matrices shipped in the sources of POA can
+be found in /usr/share/poa/.
You can test POA with the following command:
poa -read_fasta /usr/share/doc/poa/examples/multidom.seq -clustal /dev/stdout -v /usr/share/poa/blosum80.mat
- -- Charles Plessy <charles-debian-nospam at plessy.org>, Sun, 20 Aug 2006 11:21:24 +0900
+The original POA archive contains a perl script called "make_pscores.pl", which
+can be found in /usr/share/poa. To use it, you need the blastall program,
+provided by the Debian package "blast2".
+
+ -- Charles Plessy <charles-debian-nospam at plessy.org>, Tue, 24 September 2006
Modified: trunk/packages/poa/trunk/debian/control
===================================================================
--- trunk/packages/poa/trunk/debian/control 2006-09-26 06:48:06 UTC (rev 131)
+++ trunk/packages/poa/trunk/debian/control 2006-09-26 09:14:06 UTC (rev 132)
@@ -4,6 +4,7 @@
Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Charles Plessy <charles-debian-nospam at plessy.org>
Build-Depends: debhelper (>= 5), xsltproc, docbook-xsl, docbook-xml
+Suggests: blast2
Standards-Version: 3.7.2
Package: poa
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