[med-svn] r272 - in trunk/packages/melting/trunk/debian: . patches

Charles Plessy charles-guest at alioth.debian.org
Sun Apr 22 02:50:58 UTC 2007 

Author: charles-guest
Date: 2007-04-22 02:50:57 +0000 (Sun, 22 Apr 2007)
New Revision: 272

Added:
   trunk/packages/melting/trunk/debian/patches/melting.1_escape.patch
Modified:
   trunk/packages/melting/trunk/debian/changelog
   trunk/packages/melting/trunk/debian/control
   trunk/packages/melting/trunk/debian/melting-gui.menu
   trunk/packages/melting/trunk/debian/melting.doc-base
   trunk/packages/melting/trunk/debian/melting.examples
   trunk/packages/melting/trunk/debian/patches/series
   trunk/packages/melting/trunk/debian/patches/tkmelting.patch
   trunk/packages/melting/trunk/debian/rules
Log:
Unicode, documentation, magic line, ...

Modified: trunk/packages/melting/trunk/debian/changelog
===================================================================
--- trunk/packages/melting/trunk/debian/changelog	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/changelog	2007-04-22 02:50:57 UTC (rev 272)
@@ -1,7 +1,6 @@
-melting (4.2g-1) UNRELEASED; urgency=low
+melting (4.2g-1) unstable; urgency=low
 
   * Initial release (Closes: #418691)
-  * Still full of packaging bugs... 
 
- -- Charles Plessy <charles-debian-nospam at plessy.org>  Thu, 12 Apr 2007 09:40:39 +0900
+ -- Charles Plessy <charles-debian-nospam at plessy.org>  Sun, 22 Apr 2007 11:49:38 +0900
 

Modified: trunk/packages/melting/trunk/debian/control
===================================================================
--- trunk/packages/melting/trunk/debian/control	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/control	2007-04-22 02:50:57 UTC (rev 272)
@@ -3,7 +3,7 @@
 Priority: optional
 Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Charles Plessy <charles-debian-nospam at plessy.org>
-Build-Depends: debhelper (>= 5), xsltproc, docbook-xsl, docbook-xml, quilt
+Build-Depends: debhelper (>= 5), xsltproc, docbook-xsl, docbook-xml, quilt (>= 0.40)
 Standards-Version: 3.7.2
 XS-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/melting/trunk/
 XS-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/melting

Modified: trunk/packages/melting/trunk/debian/melting-gui.menu
===================================================================
--- trunk/packages/melting/trunk/debian/melting-gui.menu	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/melting-gui.menu	2007-04-22 02:50:57 UTC (rev 272)
@@ -2,6 +2,6 @@
 	needs="X11"\
 	section="Apps/Science"\
 	title="Melting"\
-	command="/usr/bin/tkmelting.pl"\
+	command="/usr/bin/tkmelting"\
 	hints="Primer design"\
 	longtitle="Computes the melting temperature for a nucleic acid duplex."

Modified: trunk/packages/melting/trunk/debian/melting.doc-base
===================================================================
--- trunk/packages/melting/trunk/debian/melting.doc-base	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/melting.doc-base	2007-04-22 02:50:57 UTC (rev 272)
@@ -7,10 +7,10 @@
 Section: science
 
 Format: pdf
-Files: /usr/share/doc/melting/melting.pdf
+Files: /usr/share/doc/melting/melting.pdf.gz
 
 Format: HTML
-Index: /usr/share/doc/melting/melting/melting.html
+Index: /usr/share/doc/melting/melting/index.html
+Files: /usr/share/doc/melting/melting/*
 
-
   

Modified: trunk/packages/melting/trunk/debian/melting.examples
===================================================================
--- trunk/packages/melting/trunk/debian/melting.examples	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/melting.examples	2007-04-22 02:50:57 UTC (rev 272)
@@ -1,2 +1,3 @@
 BIN/multi.pl
 BIN/profil.pl
+TEST
\ No newline at end of file

Added: trunk/packages/melting/trunk/debian/patches/melting.1_escape.patch
===================================================================
--- trunk/packages/melting/trunk/debian/patches/melting.1_escape.patch	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/patches/melting.1_escape.patch	2007-04-22 02:50:57 UTC (rev 272)
@@ -0,0 +1,37 @@
+--- ./DOC/melting.1	2007-04-12 09:51:08.000000000 +0900
++++ ./DOC/melting.1.debian	2007-04-13 09:32:14.000000000 +0900
+@@ -1,6 +1,6 @@
+ .\" MAN PAGE COMMENTS to
+ .\"
+-.\"     Nicolas Le Novère
++.\"     Nicolas Le Nov\(`ere
+ .\"     EMBL-EBI, Wellcome-Trust Genome Campus
+ .\"     Hinxton Cambridge, CB10 1SD, UK
+ .\"     lenov at ebi.ac.uk
+@@ -402,7 +402,7 @@
+ .I Nucleic Acids Res
+ 28: 1929-1934
+ 
+-Breslauer K.J., Frank R., Bl�ker H., Marky L.A. (1986).
++Breslauer K.J., Frank R., Bloecker H., Marky L.A. (1986).
+ Predicting DNA duplex stability from the base sequence. 
+ .I Proc Natl Acad Sci USA 
+ 83: 3746-3750
+@@ -501,7 +501,7 @@
+ backslash could actually be a mistyped base).
+ 
+ .SH COPYRIGHT
+-Melting is copyright (C) 1997, 2006 by Nicolas Le Novère
++Melting is copyright (C) 1997, 2006 by Nicolas Le Nov\(`ere
+ 
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+@@ -526,7 +526,7 @@
+ Chuche.
+ 
+ .SH AUTHOR
+-Nicolas Le Novère,
++Nicolas Le Nov\(`ere,
+ EMBL-EBI, Wellcome-Trust Genome Campus
+ Hinxton Cambridge, CB10 1SD, UK
+ lenov at ebi.ac.uk

Modified: trunk/packages/melting/trunk/debian/patches/series
===================================================================
--- trunk/packages/melting/trunk/debian/patches/series	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/patches/series	2007-04-22 02:50:57 UTC (rev 272)
@@ -3,3 +3,4 @@
 melting.c_to-unicode.patch
 melting.c_silent.patch
 decode.c_to-unicode.patch
+melting.1_escape.patch

Modified: trunk/packages/melting/trunk/debian/patches/tkmelting.patch
===================================================================
--- trunk/packages/melting/trunk/debian/patches/tkmelting.patch	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/patches/tkmelting.patch	2007-04-22 02:50:57 UTC (rev 272)
@@ -1,6 +1,15 @@
---- ./BIN/tkmelting.pl	2007-04-12 17:40:22.000000000 +0900
-+++ ./BIN/tkmelting.pl.debian	2007-04-12 18:39:12.000000000 +0900
-@@ -398,7 +398,7 @@
+Index: trunk/BIN/tkmelting.pl
+===================================================================
+--- trunk.orig/BIN/tkmelting.pl	2007-04-12 10:31:19.000000000 +0900
++++ trunk/BIN/tkmelting.pl	2007-04-22 11:45:40.000000000 +0900
+@@ -1,4 +1,5 @@
+-eval '(exit $?0)' && eval 'exec perl -S $0 ${1+ "$@"}' && eval 'exec perl -S $0 $argv:q' if 0;
++#!/usr/bin/perl
++#eval '(exit $?0)' && eval 'exec perl -S $0 ${1+ "$@"}' && eval 'exec perl -S $0 $argv:q' if 0;
+ 
+ ##############################################################################
+ #                                   MELTING                                  #
+@@ -398,7 +399,7 @@
  					     )->pack(-expand => 1,
  						     -fill   => 'both'
  						   );

Modified: trunk/packages/melting/trunk/debian/rules
===================================================================
--- trunk/packages/melting/trunk/debian/rules	2007-04-18 14:36:39 UTC (rev 271)
+++ trunk/packages/melting/trunk/debian/rules	2007-04-22 02:50:57 UTC (rev 272)
@@ -54,8 +54,8 @@
 	dh_installdirs -i
 	dh_install -i
 	install -D BIN/tkmelting.pl $(CURDIR)/debian/melting-gui/usr/bin/tkmelting
-	install -D BIN/melting.hlp  $(CURDIR)/debian/melting-gui/usr/share/melting/melting.hlp
-	install -D debian/melting-gui.desktop	$(CURDIR)/debian/melting-gui/usr/share/application/melting-gui.desktop
+	install -m 644 -D BIN/melting.hlp  $(CURDIR)/debian/melting-gui/usr/share/melting/melting.hlp
+	install -m 644 -D debian/melting-gui.desktop	$(CURDIR)/debian/melting-gui/usr/share/applications/melting-gui.desktop
 
 install-arch:
 	dh_testdir

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