[med-svn] r282 - trunk/community/debtags

[Charles Plessy]

Author: charles-guest
Date: 2007-04-30 03:55:36 +0000 (Mon, 30 Apr 2007)
New Revision: 282

Modified:
   trunk/community/debtags/tags
Log:
debtags possibly needed by EMBOSS

Modified: trunk/community/debtags/tags
===================================================================
--- trunk/community/debtags/tags	2007-04-29 13:52:50 UTC (rev 281)
+++ trunk/community/debtags/tags	2007-04-30 03:55:36 UTC (rev 282)
@@ -16,15 +16,26 @@
 field::medicine:practice
 field::medicine:odontology
 field::medicine:his
+hardware::input:dmm
+implemented-in::ACD # The AJAX Command Definition (ACD) languag, used by EMBOSS, has nothing to do with web 2.0
+suite::emboss # will also be used for the embassy pacakges
+use::analysis # further depths would be redundant with the works-with:: facet
 use::comparison
 use::comparison:alignment
+use::comparison:phylogeny
 use::experiment
 use::experiment:molecular-biology
 use::measuring
-hardware::input:dmm
+use::database:index # Or just use::index since there is already a works-with::db tag ?
+use::database:query # Or just use::query since there is already a works-with::db tag ?
 works-with::device
-works-with::sequence:nucleic
-works-with::sequence:protein
+works-with::sequence:desoxyribonucleic
+works-with::sequence:ribonucleic   # or just sequence:nucleic? 
+# I think that sequence:biolgical would be superfluous because of the field::biology tag
+works-with::sequence:peptidic
+works-with::structure              # or can it be unified with works-with::3Dmodel?
+works-with-format::abi		# Applied BIosystems. This one is not plaintext, I think.
+works-with-format::fitch        # neither this one
 works-with-format::biology:fasta
 works-with-format::biology:aln
 works-with-format::biology:pdb
@@ -32,10 +43,41 @@
 works-with-format::biology:affy:dat
 works-with-format::biology:affy:cel
 # I would rather move the above formats in the ::plaintext subfacet -- Charles
+works-with-format::plaintext:acedb
 works-with-format::plaintext:aln
+works-with-format::plaintext:asn1
+works-with-format::plaintext:codata
+works-with-format::plaintext:dbid
 works-with-format::plaintext:embl
+works-with-format::plaintext:experiment
 works-with-format::plaintext:fasta
+works-with-format::plaintext:gcg
+works-with-format::plaintext:gff
+works-with-format::plaintext:hennig86
+works-with-format::plaintext:ij
+works-with-format::plaintext:jackknifer
+works-with-format::plaintext:jackknifernon
+works-with-format::plaintext:mega
+works-with-format::plaintext:meganon
+works-with-format::plaintext:msf
+works-with-format::plaintext:nbrf
+works-with-format::plaintext:ncbi
+works-with-format::plaintext:nexus
+works-with-format::plaintext:nexusnon
+works-with-format::plaintext:paup
+works-with-format::plaintext:paupnon
 works-with-format::plaintext:pdb
+works-with-format::plaintext:pir
+works-with-format::plaintext:pfam
+works-with-format::plaintext:phylip
+works-with-format::plaintext:phylipnon
+works-with-format::plaintext:raw	#OK, that one advocates against the use of plaintext.
+works-with-format::plaintext:selex
+works-with-format::plaintext:staden
+works-with-format::plaintext:strider
+works-with-format::plaintext:stockholm
+works-with-format::plaintext:swissprot
+works-with-format::plaintext:treecon
 works-with-format::plaintext:affy:dat
 works-with-format::plaintext:affy:cel
 works-with-format::medicine:practice:xDT