[med-svn] r396 - trunk/packages/boxshade/trunk/debian
smoe-guest at alioth.debian.org
smoe-guest at alioth.debian.org
Fri Aug 10 20:45:32 UTC 2007
Author: smoe-guest
Date: 2007-08-10 20:45:31 +0000 (Fri, 10 Aug 2007)
New Revision: 396
Modified:
trunk/packages/boxshade/trunk/debian/README.Debian
trunk/packages/boxshade/trunk/debian/changelog
trunk/packages/boxshade/trunk/debian/control
trunk/packages/boxshade/trunk/debian/copyright
Log:
* Change of email address
* Ref to Debian-Med from within README.Debian
Modified: trunk/packages/boxshade/trunk/debian/README.Debian
===================================================================
--- trunk/packages/boxshade/trunk/debian/README.Debian 2007-08-09 01:39:16 UTC (rev 395)
+++ trunk/packages/boxshade/trunk/debian/README.Debian 2007-08-10 20:45:31 UTC (rev 396)
@@ -1,11 +1,22 @@
boxshade for Debian
-------------------
-The web interface for boxshare is available for download
+The web interface for boxshade is available for download
on ftp://www.isrec.isb-sib.ch/pub/software/unix/boxshade/www/box_www.tar.Z
It is not yet debinanised, please request this package and
explain your demand for it or use it on
http://www.ch.embnet.org/software/BOX_form.html
- -- Steffen Moeller <moeller at pzr.uni-rostock.de>, Sun, 29 Feb 2004 13:17:22 +0100
+For LaTeX users the inspection of the TeXshade package may be of interest
+which is comining in the Debian package texlive-latex-extra.
+
+This package has its roots in the Debian-Med Custom Debian Distribution,
+which features many more software packages in Bioinformatics, Medical
+Informatics and e-Health:
+
+ Project page: http://www.debian.org/devel/debian-med/
+ Wiki page: http://wiki.debian.org/DebianMed
+
+
+ -- Steffen Moeller <moeller at debian.org>, Fri, 10 Aug 2007 21:34:23 +0100
Modified: trunk/packages/boxshade/trunk/debian/changelog
===================================================================
--- trunk/packages/boxshade/trunk/debian/changelog 2007-08-09 01:39:16 UTC (rev 395)
+++ trunk/packages/boxshade/trunk/debian/changelog 2007-08-10 20:45:31 UTC (rev 396)
@@ -1,5 +1,7 @@
boxshade (3.3.1-2) unstable; urgency=low
+ [Charles Plessy]
+
* Debian Menu transition: Apps/Science becomes Applications/Science/Biology.
* makefile.unx : changes managed using the `quilt' patch system.
* makefile.unx : commenting `LDFLAGS= -s' so that stripping is handled by
@@ -7,6 +9,11 @@
* debian/rules : `ifeq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))' test
removed because dh_strip can work without.
+ [Steffen Moeller]
+
+ * Updated README.Debian with reference to Debian-Med
+ * Updated email address to moeller at debian.org
+
-- Charles Plessy <charles-debian-nospam at plessy.org> Thu, 9 Aug 2007 10:38:31 +0900
boxshade (3.3.1-1) unstable; urgency=low
Modified: trunk/packages/boxshade/trunk/debian/control
===================================================================
--- trunk/packages/boxshade/trunk/debian/control 2007-08-09 01:39:16 UTC (rev 395)
+++ trunk/packages/boxshade/trunk/debian/control 2007-08-10 20:45:31 UTC (rev 396)
@@ -2,7 +2,7 @@
Section: science
Priority: optional
Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Steffen Moeller <steffen_moeller at gmx.de>, Charles Plessy <charles-debian-nospam at plessy.org>
+Uploaders: Steffen Moeller <moeller at debian.org>, Charles Plessy <charles-debian-nospam at plessy.org>
Build-Depends: debhelper (>= 5), quilt, xsltproc, docbook-xsl, docbook-xml
Standards-Version: 3.7.2
XS-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/boxshade/trunk/
@@ -11,16 +11,18 @@
Package: boxshade
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
-Suggests: seaview, kalign|clustalw, xfig
+Suggests: seaview, kalign|clustalw|mafft|hmmer, xfig, texlive-latex-extra
Description: Pretty-printing of multiple sequence alignments
Boxshade is a program for creating good looking printouts from
- multiple-aligned protein or DNA sequences. The program does no alignment by
- itself, it has to take as input a file preprocessed by a multiple alignment
- program or a multiple alignment editor. Boxshade reads multiple-aligned
- sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save
- files (limited to a maximum of 150 sequences with up to 10000 elements each).
- Various kinds of shading can be applied to identical/similar residues. Output
- is written to screen or to a file in the following formats: ANSI/VT100,
- PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML
+ multiple-aligned protein or DNA sequences. The program does not perform
+ the alignment by itself and requires as input a file that was created
+ by a multiple alignment program or manually edited with respective tools.
+ .
+ Boxshade reads multiple-aligned sequences from either PILEUP-MSF,
+ CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum
+ of 150 sequences with up to 10000 elements each). Various kinds of
+ shading can be applied to identical/similar residues. Output is written
+ to screen or to a file in the following formats: ANSI/VT100, PS/EPS,
+ RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML
.
Homepage: http://www.ch.embnet.org/software/BOX_form.html
Modified: trunk/packages/boxshade/trunk/debian/copyright
===================================================================
--- trunk/packages/boxshade/trunk/debian/copyright 2007-08-09 01:39:16 UTC (rev 395)
+++ trunk/packages/boxshade/trunk/debian/copyright 2007-08-10 20:45:31 UTC (rev 396)
@@ -1,6 +1,7 @@
-This package was debianized by Steffen Moeller <moeller at pzr.uni-rostock.de> on
+This package was initially debianized by Steffen Moeller <moeller at debian.org> on
Thu, 26 Feb 2004 13:17:22 +0100. Starting from 2006, the packaging work is
-hereby placed in the public domain.
+hereby placed in the public domain and is mostly maintained by Charles Plessy
+<charles-debian-nospam at plessy.org> of the Debian-Med Custom Debian Distribution.
It was downloaded from: ftp://www.isrec.isb-sib.ch/pub/software/unix/boxshade/3.3.1/
(This is the C version)
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