[med-svn] r1042 - trunk/packages/t-coffee/trunk/debian

[charles-guest at alioth.debian.org]

Author: charles-guest
Date: 2007-12-29 18:00:48 +0000 (Sat, 29 Dec 2007)
New Revision: 1042

Removed:
   trunk/packages/t-coffee/trunk/debian/t-coffee.dirs
Modified:
   trunk/packages/t-coffee/trunk/debian/changelog
   trunk/packages/t-coffee/trunk/debian/compat
   trunk/packages/t-coffee/trunk/debian/control
   trunk/packages/t-coffee/trunk/debian/rules
Log:
Fixed a building bug, and did various small changes

Modified: trunk/packages/t-coffee/trunk/debian/changelog
===================================================================
--- trunk/packages/t-coffee/trunk/debian/changelog	2007-12-29 17:37:02 UTC (rev 1041)
+++ trunk/packages/t-coffee/trunk/debian/changelog	2007-12-29 18:00:48 UTC (rev 1042)
@@ -1,11 +1,20 @@
-t-coffee (5.31-1) UNRELEASED; urgency=low
+t-coffee (5.31-1) unstable; urgency=low
 
   * New upstream version.
   * Debian menu transition: updated debian/t-coffee-doc.doc-base.
   * debian/patches/dmcoffee.patch: to make dmcoffee work
     out of the box.
+  * debian/control:
+    - Allowed Debian Maintainers to upload t-coffee.
+    - Checked that the package conforms to Policy 3.7.3.
+    - Using debhelper 5.
+    - Updated homepage.
+    - Moved t-coffee-doc to section doc.
+  * debian/copyright: converted to machine-readable format.
+  * debian/rules: builds only indep or only arch when called with
+    binary-indep or binary-arch (Closes: #457921).
 
- -- Charles Plessy <charles-debian-nospam at plessy.org>  Fri, 23 Nov 2007 11:38:49 +0900
+ -- Charles Plessy <charles-debian-nospam at plessy.org>  Sat, 29 Dec 2007 18:54:09 +0100
 
 t-coffee (5.05-1) unstable; urgency=low
 

Modified: trunk/packages/t-coffee/trunk/debian/compat
===================================================================
--- trunk/packages/t-coffee/trunk/debian/compat	2007-12-29 17:37:02 UTC (rev 1041)
+++ trunk/packages/t-coffee/trunk/debian/compat	2007-12-29 18:00:48 UTC (rev 1042)
@@ -1 +1 @@
-4
+5

Modified: trunk/packages/t-coffee/trunk/debian/control
===================================================================
--- trunk/packages/t-coffee/trunk/debian/control	2007-12-29 17:37:02 UTC (rev 1041)
+++ trunk/packages/t-coffee/trunk/debian/control	2007-12-29 18:00:48 UTC (rev 1042)
@@ -4,16 +4,16 @@
 Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 XS-DM-Upload-Allowed: Yes
 Uploaders: Steffen Moeller <moeller at debian.org>, Charles Plessy <charles-debian-nospam at plessy.org>
-Build-Depends: debhelper (>= 4.0.0), quilt
-Standards-Version: 3.7.2.1
+Build-Depends: debhelper (>= 5), quilt
+Standards-Version: 3.7.3
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/t-coffee/trunk/
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/t-coffee
-Homepage: http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html
+Homepage: http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html
 
 Package: t-coffee
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
-Suggests: clustalw, muscle, seaview, boxshade, t-coffee-doc
+Suggests: clustalw, dialign-t, kalign, mafft, muscle, poa, probcons, seaview, boxshade, t-coffee-doc
 Description: Multiple Sequence Alignment
  T-Coffee is a multiple sequence alignment package. Given a set of
  sequences (Proteins or DNA), T-Coffee generates a multiple sequence
@@ -35,6 +35,7 @@
 
 Package: t-coffee-doc
 Architecture: all
+Section: doc
 Recommends: t-coffee
 Suggests: t-coffee-examples
 Description: PDF and HTML accompaning documents to T-Coffee

Modified: trunk/packages/t-coffee/trunk/debian/rules
===================================================================
--- trunk/packages/t-coffee/trunk/debian/rules	2007-12-29 17:37:02 UTC (rev 1041)
+++ trunk/packages/t-coffee/trunk/debian/rules	2007-12-29 18:00:48 UTC (rev 1042)
@@ -59,18 +59,17 @@
 binary-indep: build install-indep
 	dh_testdir
 	dh_testroot
-	dh_installchangelogs 
-	dh_installdocs
+	dh_installchangelogs -pt-coffee-examples -pt-coffee-doc 
+	dh_installdocs -pt-coffee-examples -pt-coffee-doc
 	chmod 644 example/*
 	dh_installexamples -pt-coffee-examples example/*
-	dh_link
-	dh_compress -X.pdf
-	dh_fixperms
-	dh_installdeb
-	dh_shlibdeps
-	dh_gencontrol
-	dh_md5sums
-	dh_builddeb
+	dh_link -pt-coffee-examples -pt-coffee-doc
+	dh_compress -pt-coffee-examples -pt-coffee-doc
+	dh_fixperms -pt-coffee-examples -pt-coffee-doc
+	dh_installdeb -pt-coffee-examples -pt-coffee-doc
+	dh_gencontrol -pt-coffee-examples -pt-coffee-doc
+	dh_md5sums -pt-coffee-examples -pt-coffee-doc
+	dh_builddeb -pt-coffee-examples -pt-coffee-doc
 
 # Build architecture-dependent files here.
 binary-arch: build install-arch
@@ -81,13 +80,13 @@
 	dh_installman -pt-coffee t_coffee.1
 	dh_link
 	dh_strip
-	dh_compress -X.pdf
-	dh_fixperms
-	dh_installdeb
-	dh_shlibdeps
-	dh_gencontrol
-	dh_md5sums
-	dh_builddeb
+	dh_compress
+	dh_fixperms -pt-coffee
+	dh_installdeb -pt-coffee
+	dh_shlibdeps -pt-coffee
+	dh_gencontrol -pt-coffee
+	dh_md5sums -pt-coffee
+	dh_builddeb -pt-coffee
 
 binary: binary-indep binary-arch
 .PHONY: build clean binary-indep binary-arch binary install configure

Deleted: trunk/packages/t-coffee/trunk/debian/t-coffee.dirs
===================================================================
--- trunk/packages/t-coffee/trunk/debian/t-coffee.dirs	2007-12-29 17:37:02 UTC (rev 1041)
+++ trunk/packages/t-coffee/trunk/debian/t-coffee.dirs	2007-12-29 18:00:48 UTC (rev 1042)
@@ -1 +0,0 @@
-usr/bin