[med-svn] r365 - trunk/packages/seaview/trunk/debian

[charles-guest at alioth.debian.org]

Author: charles-guest
Date: 2007-07-21 03:14:24 +0000 (Sat, 21 Jul 2007)
New Revision: 365

Modified:
   trunk/packages/seaview/trunk/debian/changelog
   trunk/packages/seaview/trunk/debian/control
   trunk/packages/seaview/trunk/debian/copyright
   trunk/packages/seaview/trunk/debian/menu
   trunk/packages/seaview/trunk/debian/seaview.1.xml
Log:
Menu transition, bibliographic reference, manpage update and mmisc-Depends.

Modified: trunk/packages/seaview/trunk/debian/changelog
===================================================================
--- trunk/packages/seaview/trunk/debian/changelog	2007-07-21 02:56:00 UTC (rev 364)
+++ trunk/packages/seaview/trunk/debian/changelog	2007-07-21 03:14:24 UTC (rev 365)
@@ -5,9 +5,13 @@
     to use the MergeWithUpstream option.
   * Moved examples to debian/examples.
   * Using 'quilt' as a patch management system instead of 'dpatch'.
-  * Managing all the changes to the sources whith quilt. 
+  * Managing all the changes to the sources whith quilt.
+  * Adding $(misc-Depends) in debian/control.
+  * Debian Menu transtion: moving entry to Applications/Science/Biology.
+  * Manpage: automatic date update; upgrading revision number.
+  * Adding bibliographic reference to debian/copyright and debian/control.
 
- -- Charles Plessy <charles-debian-nospam at plessy.org>  Sat, 21 Jul 2007 11:39:55 +0900
+ -- Charles Plessy <charles-debian-nospam at plessy.org>  Sat, 21 Jul 2007 12:11:38 +0900
 
 seaview (20070417-1) unstable; urgency=low
 

Modified: trunk/packages/seaview/trunk/debian/control
===================================================================
--- trunk/packages/seaview/trunk/debian/control	2007-07-21 02:56:00 UTC (rev 364)
+++ trunk/packages/seaview/trunk/debian/control	2007-07-21 03:14:24 UTC (rev 365)
@@ -3,14 +3,14 @@
 Priority: optional
 Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Charles Plessy <charles-debian-nospam at plessy.org>
-Build-Depends: debhelper ( >= 5  ), libfltk1.1-dev, dpatch, xsltproc, docbook-xsl, docbook-xml
+Build-Depends: debhelper ( >= 5  ), libfltk1.1-dev, quilt, xsltproc, docbook-xsl, docbook-xml
 Standards-Version: 3.7.2
 XS-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/seaview/trunk/
 XS-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/seaview
 
 Package: seaview
 Architecture: any
-Depends: ${shlibs:Depends}
+Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: muscle, xterm | x-terminal-emulator
 Description: Multiple sequence alignment editor
  SeaView is a graphical multiple sequence alignment editor developed by Manolo
@@ -18,4 +18,9 @@
  CLUSTAL, FASTA, PHYLIP, MASE). It allows to manually edit the alignment, and
  also to run DOT-PLOT or MUSCLE programs to locally improve the alignment.
  .
+ If you use SeaView in a published work, please cite the following
+ reference: Galtier, N., Gouy, M. and Gautier, C. (1996) SeaView and
+ Phylo_win, two graphic tools for sequence alignment and molecular
+ phylogeny. Comput. Applic. Biosci., 12, 543-548.
+ .
   Homepage: http://pbil.univ-lyon1.fr/software/seaview.html

Modified: trunk/packages/seaview/trunk/debian/copyright
===================================================================
--- trunk/packages/seaview/trunk/debian/copyright	2007-07-21 02:56:00 UTC (rev 364)
+++ trunk/packages/seaview/trunk/debian/copyright	2007-07-21 03:14:24 UTC (rev 365)
@@ -12,6 +12,10 @@
 
 Copyright (C) 1996-2005 Manolo Gouy <mgouy at biomserv.univ-lyon1.fr>
 
+If you use SeaView in a published work, please cite the following reference: Galtier,
+N., Gouy, M. and Gautier, C. (1996) SeaView and Phylo_win, two graphic tools for
+sequence alignment and molecular phylogeny. Comput. Applic. Biosci., 12, 543-548.
+
 License:
 
    This package is free software; you can redistribute it and/or modify

Modified: trunk/packages/seaview/trunk/debian/menu
===================================================================
--- trunk/packages/seaview/trunk/debian/menu	2007-07-21 02:56:00 UTC (rev 364)
+++ trunk/packages/seaview/trunk/debian/menu	2007-07-21 03:14:24 UTC (rev 365)
@@ -1,6 +1,6 @@
 ?package(seaview):\
 	needs="X11"\
-	section="Apps/Science"\
+	section="Applications/Science/Biology"\
 	hints="Multiple sequence alignment"\
 	longtitle="SeaView: multiple sequence alignment editor"\
 	title="SeaView"\

Modified: trunk/packages/seaview/trunk/debian/seaview.1.xml
===================================================================
--- trunk/packages/seaview/trunk/debian/seaview.1.xml	2007-07-21 02:56:00 UTC (rev 364)
+++ trunk/packages/seaview/trunk/debian/seaview.1.xml	2007-07-21 03:14:24 UTC (rev 365)
@@ -6,13 +6,12 @@
 
   <!ENTITY dhfirstname "Charles">
   <!ENTITY dhsurname   "Plessy">
-  <!ENTITY dhdate      "2007-03-31">
   <!ENTITY dhsection   "1">
   <!ENTITY dhemail     "charles-debian-nospam at plessy.org">
   <!ENTITY dhusername  "&dhfirstname; &dhsurname;">
   <!ENTITY dhucpackage "SEAVIEW">
   <!ENTITY dhpackage   "seaview">
-  <!ENTITY dhrelease   "20070215">
+  <!ENTITY dhrelease   "20070615">
   <!ENTITY dhtitle     "Seaview Manual">
   <!ENTITY debian      "<productname>Debian</productname>">
   <!ENTITY gnu         "<acronym>GNU</acronym>">
@@ -24,7 +23,6 @@
      <title>&dhtitle;</title>
         <productname>&dhpackage;</productname>
         <releaseinfo role="version">&dhrelease;</releaseinfo>
-        <date>&dhdate;</date>
         <authorgroup>
            <author>
               <firstname>Manolo</firstname>