[med-svn] r305 - trunk/community/debtags

[smoe-guest at alioth.debian.org]

Author: smoe-guest
Date: 2007-06-04 12:42:39 +0000 (Mon, 04 Jun 2007)
New Revision: 305

Modified:
   trunk/community/debtags/tags
Log:
Some additions to increase expressiveness of Debtags for an attempt to
homogenize the BioConductor biocViews with them.


Modified: trunk/community/debtags/tags
===================================================================
--- trunk/community/debtags/tags	2007-06-03 09:36:52 UTC (rev 304)
+++ trunk/community/debtags/tags	2007-06-04 12:42:39 UTC (rev 305)
@@ -1,3 +1,4 @@
+field::biology:annotation
 field::biology:sequence
 field::biology:sequence:dna
 field::biology:sequence:rna
@@ -3,5 +4,5 @@
 field::biology:sequence:protein
 # I would rather move the :sequence tags to the works-with:: facet -- Charles
-field::biology:structure # or field::biology:structural ? -- Charles
+field::biology:structural
 field::biology:molecular
 field::biology:evolution
@@ -12,6 +13,7 @@
 field::biology:metabolomics
 field::biology:transcriptiomics
 field::biology:systems
+field::mathematics:graphs
 field::medicine:imaging
 field::medicine:practice
 field::medicine:odontology
@@ -19,6 +21,7 @@
 hardware::input:dmm
 implemented-in::ACD # The AJAX Command Definition (ACD) languag, used by EMBOSS, has nothing to do with web 2.0
 suite::emboss # will also be used for the embassy pacakges
+use::annotation
 use::analysis # further depths would be redundant with the works-with:: facet
 use::comparison
 use::comparison:alignment
@@ -43,6 +46,8 @@
 works-with-format::biology:affy:dat
 works-with-format::biology:affy:cel
 # I would rather move the above formats in the ::plaintext subfacet -- Charles
+# This is fine with me. And what about affy:cdf? This could go to plaintext:cdf directly? -- Steffen
+
 works-with-format::plaintext:acedb
 works-with-format::plaintext:aln
 works-with-format::plaintext:asn1
@@ -82,6 +87,7 @@
 works-with-format::plaintext:affy:cel
 works-with-format::medicine:practice:xDT
 works-with-format::medicine:DICOM # or works-with-format::dicom ? -- Charles
+
 # an earlier idea of mine to separate different
 # kinds of prediction methods - appreciated?
 # "use" rather than "made-of"?
@@ -90,3 +96,8 @@
 made-of::algorithm:hashing
 made-of::algorithm:hidden-markov-model
 made-of::algorithm:neural-network
+made-of::algorithm:dimension-reduction # to comprise ICA and PCA, spring-embedding -- Steffen
+
+# some less arguable debtags:
+made-of::data:R # came up in my attempt to kind of homogenize biocViews with Debtags
+