[med-svn] r853 - in trunk/ballview/ballview/trunk: . debian
amoll-guest at alioth.debian.org
amoll-guest at alioth.debian.org
Fri Nov 23 11:05:44 UTC 2007
Author: amoll-guest
Date: 2007-11-23 11:05:44 +0000 (Fri, 23 Nov 2007)
New Revision: 853
Added:
trunk/ballview/ballview/trunk/debian/
trunk/ballview/ballview/trunk/debian/BALLView
trunk/ballview/ballview/trunk/debian/ballview-common.dirs
trunk/ballview/ballview/trunk/debian/ballview-common.doc-base
trunk/ballview/ballview/trunk/debian/ballview-common.links
trunk/ballview/ballview/trunk/debian/ballview.1
trunk/ballview/ballview/trunk/debian/ballview.desktop
trunk/ballview/ballview/trunk/debian/ballview.dirs
trunk/ballview/ballview/trunk/debian/ballview.menu
trunk/ballview/ballview/trunk/debian/changelog
trunk/ballview/ballview/trunk/debian/compat
trunk/ballview/ballview/trunk/debian/control
trunk/ballview/ballview/trunk/debian/copyright
trunk/ballview/ballview/trunk/debian/rules
Log:
[svn-inject] Applying Debian modifications to trunk
Property changes on: trunk/ballview/ballview/trunk/debian
___________________________________________________________________
Name: mergeWithUpstream
+ 1
Added: trunk/ballview/ballview/trunk/debian/BALLView
===================================================================
--- trunk/ballview/ballview/trunk/debian/BALLView (rev 0)
+++ trunk/ballview/ballview/trunk/debian/BALLView 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,7 @@
+#!/bin/sh
+export LD_LIBRARY_PATH=/usr/lib/BALL
+export BALL_DATA_PATH=/usr/share/BALL/data
+export PYTHONPATH=/usr/lib/BALL/
+# set Antialiasing for NVIDIA cards
+export __GL_FSAA_MODE=6
+/usr/lib/BALL/BALLView $@
Added: trunk/ballview/ballview/trunk/debian/ballview-common.dirs
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview-common.dirs (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview-common.dirs 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,4 @@
+usr/share/BALL/data
+usr/share/BALL/doc
+usr/share/doc/ballview/html/
+usr/share/doc/ballview/html/
Added: trunk/ballview/ballview/trunk/debian/ballview-common.doc-base
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview-common.doc-base (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview-common.doc-base 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,19 @@
+Document: ballview
+Title: Debian ballview Manual
+Author: Andreas Moll
+Abstract: BALLView is a free molecular modeling and molecular graphics tool
+ BALLView provides fast OpenGL-based visualization of molecular structures,
+ molecular mechanics methods (minimization, MD simulation using the
+ AMBER, CHARMM, and MMFF94 force fields), calculation and visualization
+ of electrostatic properties (FDPB) and molecular editing features.
+ The application's documentation is available as HTML and can be read in
+ the program itself.
+Section: Science
+
+Format: HTML
+Index: /usr/share/doc/ballview/html/BALLView/index.html
+Files: /usr/share/doc/ballview/html/BALLView/*.html
+
+
+Format: PDF
+Files: /usr/share/doc/ballview/tutorial.pdf.gz
Added: trunk/ballview/ballview/trunk/debian/ballview-common.links
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview-common.links (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview-common.links 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,2 @@
+usr/share/doc/ballview/html/BALLView usr/share/BALL/doc/BALLView
+usr/share/doc/ballview/html/BALL usr/share/BALL/doc/BALL
Added: trunk/ballview/ballview/trunk/debian/ballview.1
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview.1 (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview.1 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,53 @@
+.\" Copyright 1998-2007 BALL project group
+.TH BALLView 1 "24 January 2007"
+.SH NAME
+BALLView - A free molecular modeling and molecular graphics tool (version 1.2)
+.SH SYNOPSIS
+.B BALLView
+.RI [Molecular-file]
+.SH DESCRIPTION
+.B BALLView
+BALLView provides fast OpenGL-based visualization of molecular structures,
+molecular mechanics methods (minimization, MD simulation using the
+AMBER and CHARMM force fields), calculation and visualization
+of electrostatic properties (FDPB).
+.P
+BALLView is based on BALL (Biochemical Algorithms Library) ,
+which is currently being developed in the groups of Hans-Peter Lenhof
+(Saarland University, Saarbruecken, Germany) and Oliver Kohlbacher
+(University of Tuebingen, Germany). BALL is an application framework
+in C++ that has been specifically designed for rapid software
+development in Molecular Modeling and Computational Molecular Biology.
+It provides an extensive set of data structures as well as classes
+for Molecular Mechanics, advanced solvation methods, comparison and
+analysis of protein structures, file import/export, and visualization.
+.P
+BALLView is available under the LGPL licence.
+.P
+Homepage: www.BALLView.org
+.SH USAGE
+.PP
+To run BALLView, simply type:
+.PP
+.RS
+BALLView
+.P
+or
+.P
+BALLView file.pdp
+.RE
+.PP
+where
+.I file.pdb
+is your PDB file. BALLView also supports HIN, MOL, MOL2 and SD files.
+.P
+BALLView provides HTML documentation, that is available in the application
+itself (see Help menu).
+.P
+This package also includes Python example scripts, that can be run in BALLView.
+They can be found under /usr/share/BALL/PYTHON.
+.SH AUTHOR
+BALLView is copyright 1998-2007 by the BALL project group
+.SH "SEE ALSO"
+.br
+.B http://www.ballview.org
Added: trunk/ballview/ballview/trunk/debian/ballview.desktop
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview.desktop (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview.desktop 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,10 @@
+[Desktop Entry]
+Version=1.0
+Encoding=UTF-8
+Terminal=false
+Icon=/usr/share/BALL/data/graphics/logo.png
+Exec=BALLView
+Name=BALLView
+GenericName=Molecular modeling and visualization tool
+Type=Application
+Categories=Biology;Science;Education;
Added: trunk/ballview/ballview/trunk/debian/ballview.dirs
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview.dirs (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview.dirs 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,3 @@
+usr/bin
+usr/lib/BALL
+usr/share/man/man1
Added: trunk/ballview/ballview/trunk/debian/ballview.menu
===================================================================
--- trunk/ballview/ballview/trunk/debian/ballview.menu (rev 0)
+++ trunk/ballview/ballview/trunk/debian/ballview.menu 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,4 @@
+?package(ballview):needs="X11" section="Apps/Science"\
+ title="BALLView" command="/usr/bin/BALLView" icon="/usr/share/BALL/data/graphics/logo.png"\
+ longtitle="BALLView : Molecular modeling and molecular graphics tool"\
+ hint:"Molecular modeling and molecular graphics"
Added: trunk/ballview/ballview/trunk/debian/changelog
===================================================================
--- trunk/ballview/ballview/trunk/debian/changelog (rev 0)
+++ trunk/ballview/ballview/trunk/debian/changelog 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,6 @@
+ballview (1.2-1) unstable; urgency=low
+
+ * Initial release (Closes: #407665)
+
+ -- Andreas Moll <kerosin at gmx.de> Sat, 20 Jan 2007 13:34:29 +0100
+
Added: trunk/ballview/ballview/trunk/debian/compat
===================================================================
--- trunk/ballview/ballview/trunk/debian/compat (rev 0)
+++ trunk/ballview/ballview/trunk/debian/compat 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1 @@
+4
Added: trunk/ballview/ballview/trunk/debian/control
===================================================================
--- trunk/ballview/ballview/trunk/debian/control (rev 0)
+++ trunk/ballview/ballview/trunk/debian/control 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,39 @@
+Source: ballview
+Section: science
+Priority: optional
+Maintainer: Andreas Moll <kerosin at gmx.de>
+Build-Depends: debhelper (>= 4), libqt4-dev, libqt4-gui, sip4, python-sip4-dev, flex, bison, autoconf, libglew-dev, python-dev, doxygen, tidy, texlive-base, texlive-latex-recommended, texlive-latex-extra, gs-common
+Standards-Version: 3.7.2
+
+Package: ballview
+Architecture: any
+Depends: ${shlibs:Depends}, python, ballview-common
+Description: A free molecular modeling and molecular graphics tool
+ BALLView provides fast OpenGL-based visualization of molecular structures,
+ molecular mechanics methods (minimization, MD simulation using the
+ AMBER, CHARMM, and MMFF94 force fields), calculation and visualization
+ of electrostatic properties (FDPB) and molecular editing features.
+ .
+ BALLView is based on BALL (Biochemical Algorithms Library) ,
+ which is currently being developed in the groups of Hans-Peter Lenhof
+ (Saarland University, Saarbruecken, Germany) and Oliver Kohlbacher
+ (University of Tuebingen, Germany). BALL is an application framework
+ in C++ that has been specifically designed for rapid software
+ development in Molecular Modeling and Computational Molecular Biology.
+ It provides an extensive set of data structures as well as classes
+ for Molecular Mechanics, advanced solvation methods, comparison and
+ analysis of protein structures, file import/export, and visualization.
+ .
+ BALLView is available under the LGPL licence.
+ .
+ Homepage: www.BALLView.org
+
+Package: ballview-common
+Architecture: all
+Depends: ${shlibs:Depends}
+Description: Shared files for the ballview-package,
+ including the documentation, data files and example scripts.
+ .
+ BALLView is available under the LGPL licence.
+ .
+ Homepage: www.BALLView.org
Added: trunk/ballview/ballview/trunk/debian/copyright
===================================================================
--- trunk/ballview/ballview/trunk/debian/copyright (rev 0)
+++ trunk/ballview/ballview/trunk/debian/copyright 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,33 @@
+This package was debianized by Andreas Moll <kerosin at gmx.de> on
+Sat, 20 Jan 2007 13:34:29 +0100.
+
+It was downloaded from <www.ballview.org>
+The installation files for Windows and MacOS were removed to
+ensure smaller source package sizes.
+
+Upstream Author: Andreas Moll <kerosin at gmx.de>
+
+Copyright: 2007, the BALL project group
+License:
+
+ This package is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later version.
+
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public
+ License along with this package; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
+On Debian systems, the complete text of the GNU Lesser General
+Public License can be found in `/usr/share/common-licenses/LGPL'.
+
+
+The Debian packaging is (C) 2007, Andreas Moll <kerosin at gmx.de> and
+is licensed under the GPL, see `/usr/share/common-licenses/GPL'.
+
Added: trunk/ballview/ballview/trunk/debian/rules
===================================================================
--- trunk/ballview/ballview/trunk/debian/rules (rev 0)
+++ trunk/ballview/ballview/trunk/debian/rules 2007-11-23 11:05:44 UTC (rev 853)
@@ -0,0 +1,81 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Uncomment this to turn on verbose mode.
+export DH_VERBOSE=1
+
+CFLAGS = -Wall -g
+
+ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
+ CFLAGS += -O0
+else
+ CFLAGS += -O2
+endif
+
+configure: configure-stamp
+configure-stamp:
+ dh_testdir
+ # Add here commands to configure the package.
+ debian-upstream/debian-ball-install configure
+ touch configure-stamp
+
+build: build-stamp
+build-stamp: configure-stamp
+ dh_testdir
+ debian-upstream/debian-ball-install build
+ touch build-stamp
+
+clean:
+ dh_testdir
+ dh_testroot
+ rm -f build-stamp configure-stamp
+ # Add here commands to clean up after the build process.
+ debian-upstream/debian-ball-install clean
+ dh_clean
+
+install: build
+ dh_testdir
+ dh_testroot
+ dh_clean -k
+ dh_installdirs
+ # Add here commands to install the package into debian/ballview.
+ #DESTDIR=$(CURDIR)/debian/ballview
+ debian-upstream/debian-ball-install install
+
+
+# Build architecture-independent files here.
+binary-indep: build install
+# We have nothing to do by default.
+
+# Build architecture-dependent files here.
+binary-arch: build install
+ dh_testdir
+ dh_testroot
+ dh_installchangelogs
+ dh_installdocs
+ dh_installexamples
+# dh_install
+# dh_installmenu
+# dh_installdebconf
+# dh_installlogrotate
+# dh_installemacsen
+# dh_installpam
+# dh_installmime
+# dh_python
+# dh_installinit
+# dh_installcron
+# dh_installinfo
+ dh_installman -p ballview
+ dh_link
+ dh_strip -p ballview
+ dh_compress
+ dh_fixperms
+# dh_perl
+# dh_makeshlibs
+ dh_installdeb
+ dh_shlibdeps
+ dh_gencontrol
+ dh_md5sums
+ dh_builddeb
+
+binary: binary-indep binary-arch
+.PHONY: build clean binary-indep binary-arch binary install configure
Property changes on: trunk/ballview/ballview/trunk/debian/rules
___________________________________________________________________
Name: svn:executable
+ *
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