[med-svn] r867 - trunk/packages/glam2/trunk/debian

[charles-guest at alioth.debian.org]

Author: charles-guest
Date: 2007-11-27 01:52:30 +0000 (Tue, 27 Nov 2007)
New Revision: 867

Added:
   trunk/packages/glam2/trunk/debian/glam2.install
Removed:
   trunk/packages/glam2/trunk/debian/glam2.install
   trunk/packages/glam2/trunk/debian/purge-fasta.dirs
   trunk/packages/glam2/trunk/debian/purge-fasta.install
Modified:
   trunk/packages/glam2/trunk/debian/control
   trunk/packages/glam2/trunk/debian/rules
Log:
Finally, shipping everyting in the same package

Modified: trunk/packages/glam2/trunk/debian/control
===================================================================
--- trunk/packages/glam2/trunk/debian/control	2007-11-26 14:08:16 UTC (rev 866)
+++ trunk/packages/glam2/trunk/debian/control	2007-11-27 01:52:30 UTC (rev 867)
@@ -12,7 +12,6 @@
 Package: glam2
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
-Suggests: purge-fasta
 Description: gapped protein motifs from unaligned sequences
  GLAM2 is a software package for finding motifs in sequences, typically
  amino-acid or nucleotide sequences. A motif is a re-occurring sequence
@@ -23,13 +22,7 @@
  a set of sequences; glam2scan — for finding matches, in a sequence database,
  to a motif discovered by glam2; glam2format — for converting glam2 motifs to
  standard alignment formats; glam2mask — for masking glam2 motifs out of
- sequences, so that weaker motifs can be found. The program `purge' is
- distributed in a separate package, purge-fasta.
+ sequences, so that weaker motifs can be found; glam2-purge — for removing
+ highly similar members of a set of sequences.
  .
  In this package, the fast Fourier algorithm (FFT) was enabled in glam2.
-
-Package: purge-fasta
-Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}
-Description: Provisional description
- Unsure if purge-fasta deserves its own package

Deleted: trunk/packages/glam2/trunk/debian/glam2.install
===================================================================
--- trunk/packages/glam2/trunk/debian/glam2.install	2007-11-26 14:08:16 UTC (rev 866)
+++ trunk/packages/glam2/trunk/debian/glam2.install	2007-11-27 01:52:30 UTC (rev 867)
@@ -1,4 +0,0 @@
-src/glam2format /usr/bin/
-src/glam2mask /usr/bin/
-src/glam2scan /usr/bin/
-src/glam2fft /usr/bin/

Added: trunk/packages/glam2/trunk/debian/glam2.install
===================================================================
--- trunk/packages/glam2/trunk/debian/glam2.install	                        (rev 0)
+++ trunk/packages/glam2/trunk/debian/glam2.install	2007-11-27 01:52:30 UTC (rev 867)
@@ -0,0 +1,5 @@
+src/glam2format /usr/bin/
+src/glam2mask /usr/bin/
+src/glam2scan /usr/bin/
+src/glam2fft /usr/bin/
+purge/purge /usr/bin

Deleted: trunk/packages/glam2/trunk/debian/purge-fasta.dirs
===================================================================
--- trunk/packages/glam2/trunk/debian/purge-fasta.dirs	2007-11-26 14:08:16 UTC (rev 866)
+++ trunk/packages/glam2/trunk/debian/purge-fasta.dirs	2007-11-27 01:52:30 UTC (rev 867)
@@ -1 +0,0 @@
-usr/bin

Deleted: trunk/packages/glam2/trunk/debian/purge-fasta.install
===================================================================
--- trunk/packages/glam2/trunk/debian/purge-fasta.install	2007-11-26 14:08:16 UTC (rev 866)
+++ trunk/packages/glam2/trunk/debian/purge-fasta.install	2007-11-27 01:52:30 UTC (rev 867)
@@ -1 +0,0 @@
-purge/purge /usr/bin

Modified: trunk/packages/glam2/trunk/debian/rules
===================================================================
--- trunk/packages/glam2/trunk/debian/rules	2007-11-26 14:08:16 UTC (rev 866)
+++ trunk/packages/glam2/trunk/debian/rules	2007-11-27 01:52:30 UTC (rev 867)
@@ -30,7 +30,7 @@
 install: build
 	dh_install
 	mv $(CURDIR)/debian/glam2/usr/bin/glam2fft $(CURDIR)/debian/glam2/usr/bin/glam2
-	mv $(CURDIR)/debian/purge-fasta/usr/bin/purge $(CURDIR)/debian/purge-fasta/usr/bin/purge-fasta
+	mv $(CURDIR)/debian/glam2/usr/bin/purge    $(CURDIR)/debian/glam2/usr/bin/glam2-purge
 
 binary-indep: build install