[med-svn] r551 - in trunk/packages/exonerate/trunk/debian: . manpages

[smoe-guest at alioth.debian.org]

Author: smoe-guest
Date: 2007-10-03 22:51:40 +0000 (Wed, 03 Oct 2007)
New Revision: 551

Modified:
   trunk/packages/exonerate/trunk/debian/README.Debian
   trunk/packages/exonerate/trunk/debian/changelog
   trunk/packages/exonerate/trunk/debian/control
   trunk/packages/exonerate/trunk/debian/copyright
   trunk/packages/exonerate/trunk/debian/docs
   trunk/packages/exonerate/trunk/debian/manpages/fastaoverlap.1
Log:
Uploaded exonerate.


Modified: trunk/packages/exonerate/trunk/debian/README.Debian
===================================================================
--- trunk/packages/exonerate/trunk/debian/README.Debian	2007-10-03 22:06:22 UTC (rev 550)
+++ trunk/packages/exonerate/trunk/debian/README.Debian	2007-10-03 22:51:40 UTC (rev 551)
@@ -1,8 +1,16 @@
 exonerate for Debian
 --------------------
 
-Well, this is a very first attempt to package Exonerate. It is not fully
-up to the standards of Debian, yet, some man pages are still missing, but
-otherwise it should be just fine.
+Charles has fixed the man pages for this package - many thanks to him.
 
- -- Steffen Moeller <steffen_moeller at gmx.de>  Mon, 02 Jul 2007 11:42:38 +0200
+The upstream author, Guy Slater, is very supportive of Debian. He even
+gave brief instructions on how to build a package in his README. 
+This is much appreciated.
+
+Guy was contacted asking for a clarification of the version of the
+GPL he refers to and to avoid the web link in the C sources to a (now)
+later version than he distributes with the source.
+
+Steffen
+
+ -- Steffen Moeller <moeller at debian.org>  Mon, 02 Jul 2007 11:42:38 +0200

Modified: trunk/packages/exonerate/trunk/debian/changelog
===================================================================
--- trunk/packages/exonerate/trunk/debian/changelog	2007-10-03 22:06:22 UTC (rev 550)
+++ trunk/packages/exonerate/trunk/debian/changelog	2007-10-03 22:51:40 UTC (rev 551)
@@ -2,5 +2,5 @@
 
   * Initial release (Closes: #431404).
 
- -- Steffen Moeller <steffen_moeller at gmx.de>  Mon, 02 Jul 2007 11:42:38 +0200
+ -- Steffen Moeller <moeller at debian.org>  Mon, 02 Jul 2007 11:42:38 +0200
 

Modified: trunk/packages/exonerate/trunk/debian/control
===================================================================
--- trunk/packages/exonerate/trunk/debian/control	2007-10-03 22:06:22 UTC (rev 550)
+++ trunk/packages/exonerate/trunk/debian/control	2007-10-03 22:51:40 UTC (rev 551)
@@ -13,10 +13,10 @@
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Suggests: wise
-Description: generic tool for pairwise sequence comparison
+Description: tool for comparison of long biological sequences
  Much of the functionality of the Wise dynamic programming
  suite was reimplemented in C for better efficiency. 
  Exonerate is an intrinsic component of the building of
- the ENSEMBL genome databases, providing similarity
+ the Ensembl genome databases, providing similarity
  scores between RNA and DNA sequences and thus determining
  splice variants and coding sequences in general.

Modified: trunk/packages/exonerate/trunk/debian/copyright
===================================================================
--- trunk/packages/exonerate/trunk/debian/copyright	2007-10-03 22:06:22 UTC (rev 550)
+++ trunk/packages/exonerate/trunk/debian/copyright	2007-10-03 22:51:40 UTC (rev 551)
@@ -1,4 +1,4 @@
-This package was debianized by Steffen Moeller <steffen_moeller at gmx.de> on
+This package was debianized by Steffen Moeller <moeller at debian.org> on
 Mon, 02 Jul 2007 11:42:38 +0200.
 
 It was downloaded from http://www.ebi.ac.uk/~guy/exonerate/
@@ -29,6 +29,10 @@
 
 On Debian systems, the complete text of the GNU Lesser General
 Public License can be found in `/usr/share/common-licenses/LGPL'.
+The source code of this package links to the web URL indicating
+to version 3 of the license. The author is likely not to have been
+aware of the new version at the time the source code was released.
+The version distributed with the source is an earlier version.
 
-The Debian packaging is (C) 2007, Steffen Moeller <steffen_moeller at gmx.de> and
+The Debian packaging is (C) 2007, Steffen Moeller <moeller at debian.org> and
 is licensed under the LGPL, see `/usr/share/common-licenses/LGPL'.

Modified: trunk/packages/exonerate/trunk/debian/docs
===================================================================
--- trunk/packages/exonerate/trunk/debian/docs	2007-10-03 22:06:22 UTC (rev 550)
+++ trunk/packages/exonerate/trunk/debian/docs	2007-10-03 22:51:40 UTC (rev 551)
@@ -1,3 +1,4 @@
 NEWS
 README
 TODO
+AUTHORS

Modified: trunk/packages/exonerate/trunk/debian/manpages/fastaoverlap.1
===================================================================
--- trunk/packages/exonerate/trunk/debian/manpages/fastaoverlap.1	2007-10-03 22:06:22 UTC (rev 550)
+++ trunk/packages/exonerate/trunk/debian/manpages/fastaoverlap.1	2007-10-03 22:51:40 UTC (rev 551)
@@ -118,5 +118,5 @@
 .SH AUTHOR
 exonerate was written by Guy Slater <guy at ebi.ac.uk>.
 .PP
-This manual page was written by Steffen Möller
+This manual page was written by Steffen Moeller
 for the Debian project (but may be used by others).