[med-svn] r738 - trunk/packages/bioperl/trunk/debian

[smoe-guest at alioth.debian.org]

Author: smoe-guest
Date: 2007-10-29 20:01:11 +0000 (Mon, 29 Oct 2007)
New Revision: 738

Modified:
   trunk/packages/bioperl/trunk/debian/README.Debian
   trunk/packages/bioperl/trunk/debian/changelog
   trunk/packages/bioperl/trunk/debian/control
Log:
I am fairly happy with the BioPerl package now as it was just successfully passing
its run through pbuilder. The following lintian warning remain. If someone
has any idea what to do about them ... please go for it.

Many thanks go to Charles for all his work on this!

Steffen

W: bioperl: manpage-has-bad-whatis-entry usr/share/man/man1/bp_make_mrna_protein.1p.gz
W: bioperl: manpage-has-bad-whatis-entry usr/share/man/man1/bp_search2BSML.1p.gz
W: bioperl: manpage-has-bad-whatis-entry usr/share/man/man1/bp_search2gff.1p.gz
W: bioperl: manpage-has-bad-whatis-entry usr/share/man/man1/bp_search2tribe.1p.gz
W: bioperl: manpage-has-bad-whatis-entry usr/share/man/man3/Bio::DB::GFF::Adaptor::biofetch.3pm.gz
W: bioperl: manpage-has-bad-whatis-entry usr/share/man/man3/Bio::SeqIO::agave.3pm.gz
W: bioperl: manpage-has-errors-from-man usr/share/man/man3/Bio::SeqIO::bsml.3pm.gz 409: warning [p 4, 0.3i]: can't break line
W: bioperl: manpage-has-errors-from-man usr/share/man/man3/Bio::Tools::Geneid.3pm.gz 159: warning: can't find numbered character 243
W: bioperl: manpage-has-errors-from-man usr/share/man/man3/Bio::Tools::GuessSeqFormat.3pm.gz 276: warning: can't find numbered character 228
W: bioperl: binary-without-manpage usr/bin/bp_seqfeature_load



Modified: trunk/packages/bioperl/trunk/debian/README.Debian
===================================================================
--- trunk/packages/bioperl/trunk/debian/README.Debian	2007-10-28 21:27:54 UTC (rev 737)
+++ trunk/packages/bioperl/trunk/debian/README.Debian	2007-10-29 20:01:11 UTC (rev 738)
@@ -9,8 +9,9 @@
 Adopted by a new maintainer
    Matt Hope <dopey at debian.org>  Tue,  6 Nov 2001 17:17:30 +1100
 
-and now
+and now by
+
  Charles Plessy <charles-debian-nospam at plessy.org>
+ assisted by the Debian-Med community.
 
  -- Fri, 21 Sep 2007 22:52:22 +0900
-

Modified: trunk/packages/bioperl/trunk/debian/changelog
===================================================================
--- trunk/packages/bioperl/trunk/debian/changelog	2007-10-28 21:27:54 UTC (rev 737)
+++ trunk/packages/bioperl/trunk/debian/changelog	2007-10-29 20:01:11 UTC (rev 738)
@@ -4,7 +4,7 @@
   * Upgraded source package to debhelper 5 and standards-version 3.7.2.
   * Added libmodule-build-perl and libtest-harness-perl to
     build-depends-indep.
-  * Disabled automatic CRAN downolad.
+  * Disabled automatic CRAN download.
   * Using quilt instead of .diff.gz to manage modifications.
   * Updated Recommends list for the binary package.
   * Moved the "production-quality" scripts to /usr/bin/.

Modified: trunk/packages/bioperl/trunk/debian/control
===================================================================
--- trunk/packages/bioperl/trunk/debian/control	2007-10-28 21:27:54 UTC (rev 737)
+++ trunk/packages/bioperl/trunk/debian/control	2007-10-29 20:01:11 UTC (rev 738)
@@ -17,4 +17,6 @@
 Description: Perl tools for computational molecular biology
  The Bioperl project is a coordinated effort to collect computational methods
  routinely used in bioinformatics into a set of standard CPAN-style,
- well-documented, and freely available Perl modules. 
+ well-documented, and freely available Perl modules. It is well-accepted
+ throughout the community and used in many high-profile projects, e.g., 
+ Ensembl.