[med-svn] r2139 - trunk/packages/clustalw-mpi/trunk/debian
plessy at alioth.debian.org
plessy at alioth.debian.org
Fri Jul 4 14:35:28 UTC 2008
Author: plessy
Date: 2008-07-04 14:35:27 +0000 (Fri, 04 Jul 2008)
New Revision: 2139
Added:
trunk/packages/clustalw-mpi/trunk/debian/examples
Removed:
trunk/packages/clustalw-mpi/trunk/debian/dirs
trunk/packages/clustalw-mpi/trunk/debian/patches/
Modified:
trunk/packages/clustalw-mpi/trunk/debian/changelog
trunk/packages/clustalw-mpi/trunk/debian/control
trunk/packages/clustalw-mpi/trunk/debian/copyright
trunk/packages/clustalw-mpi/trunk/debian/docs
trunk/packages/clustalw-mpi/trunk/debian/rules
Log:
Switched to CDBS, updated to Policy 3.8.0
* debian/copyright:
- Lifted debian/copyright to the latest version, and licenced my
contribution to this packaging work to "Same as CLUSTALW-MPI".
- Added a disclaimer clarifying that this package is not part of the
Debian operating system (requirement of Policy 3.8.0).
* debian/patches/01_Makefile.patch removed.
Its function is now carried out by debian/rules and debhelper.
* debian/rules switched to CDBS.
* debian/control:
- Dropped build-dependancy on quilt and added one on cdbs.
- Updated Standards-Version to 3.8.0.
Modified: trunk/packages/clustalw-mpi/trunk/debian/changelog
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/changelog 2008-07-04 14:27:40 UTC (rev 2138)
+++ trunk/packages/clustalw-mpi/trunk/debian/changelog 2008-07-04 14:35:27 UTC (rev 2139)
@@ -7,8 +7,17 @@
* Updated my email address.
* Updated upstreams' email address.
* Refreshed the manpage.
- * Lifted debian/copyright to the latest version, and licenced my
- contribution to this packaging work to "Same as CLUSTALW-MPI".
+ * debian/copyright:
+ - Lifted debian/copyright to the latest version, and licenced my
+ contribution to this packaging work to "Same as CLUSTALW-MPI".
+ - Added a disclaimer clarifying that this package is not part of the
+ Debian operating system (requirement of Policy 3.8.0).
+ * debian/patches/01_Makefile.patch removed.
+ Its function is now carried out by debian/rules and debhelper.
+ * debian/rules switched to CDBS.
+ * debian/control:
+ - Dropped build-dependancy on quilt and added one on cdbs.
+ - Updated Standards-Version to 3.8.0.
-- Charles Plessy <plessy at debian.org> Wed, 04 Jun 2008 08:14:42 +0900
Modified: trunk/packages/clustalw-mpi/trunk/debian/control
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/control 2008-07-04 14:27:40 UTC (rev 2138)
+++ trunk/packages/clustalw-mpi/trunk/debian/control 2008-07-04 14:35:27 UTC (rev 2139)
@@ -6,11 +6,12 @@
Uploaders: Steffen Moeller <moeller at debian.org>,
Andreas Tille <tille at debian.org>,
Charles Plessy <plessy at debian.org>
-Build-Depends: debhelper (>= 5), lam4-dev, quilt
-Standards-Version: 3.7.3
+Build-Depends: debhelper (>= 5), lam4-dev, cdbs
+Standards-Version: 3.8.0
Homepage: http://kmlvli.com/kuobin/clustalw-mpi/
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/clustalw-mpi/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/clustalw-mpi/trunk/
+XS-Autobuild: yes
Package: clustalw-mpi
Architecture: any
Modified: trunk/packages/clustalw-mpi/trunk/debian/copyright
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/copyright 2008-07-04 14:27:40 UTC (rev 2138)
+++ trunk/packages/clustalw-mpi/trunk/debian/copyright 2008-07-04 14:35:27 UTC (rev 2139)
@@ -5,6 +5,13 @@
Packaged-Date: Mon, 30 Jun 2003 22:54:41 +0200.
Original-Source-Location: http://kmlvli.com/kuobin/clustalw-mpi/clustalw-mpi-0.15.tar.gz
+X-Non-Free-Disclamer: This package is not part of the Debian operating system.
+ The clustalw-mpi source and binary Debian packages are part of the "non-free"
+ area in our archive. The packages in this area are not part of the Debian
+ system, although they have been configured for use with Debian. We nevertheless
+ support the use of the clustalw-mpi source and binary Debian pacakges by
+ providing infrastructure such as our bug tracking system and mailing lists.
+
Files: *
Copyright: © 2001-2008 Dr. Kuo-Bin Li, Bioinformatics Institute, Singapore
License: COPYRIGHT and LICENSING POLICY
Deleted: trunk/packages/clustalw-mpi/trunk/debian/dirs
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/dirs 2008-07-04 14:27:40 UTC (rev 2138)
+++ trunk/packages/clustalw-mpi/trunk/debian/dirs 2008-07-04 14:35:27 UTC (rev 2139)
@@ -1 +0,0 @@
-usr/bin
Modified: trunk/packages/clustalw-mpi/trunk/debian/docs
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/docs 2008-07-04 14:27:40 UTC (rev 2138)
+++ trunk/packages/clustalw-mpi/trunk/debian/docs 2008-07-04 14:35:27 UTC (rev 2139)
@@ -1 +1,2 @@
README.clustalw-mpi
+History
Added: trunk/packages/clustalw-mpi/trunk/debian/examples
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/examples (rev 0)
+++ trunk/packages/clustalw-mpi/trunk/debian/examples 2008-07-04 14:35:27 UTC (rev 2139)
@@ -0,0 +1,2 @@
+db10.input
+dele.input
Modified: trunk/packages/clustalw-mpi/trunk/debian/rules
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/rules 2008-07-04 14:27:40 UTC (rev 2138)
+++ trunk/packages/clustalw-mpi/trunk/debian/rules 2008-07-04 14:35:27 UTC (rev 2139)
@@ -1,82 +1,13 @@
#!/usr/bin/make -f
-# debian/rules for clustalw-mpi
-# Copyright 2004-2008 Steffen Moeller, Andreas Tille
-# GPL
-# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
+include /usr/share/cdbs/1/rules/debhelper.mk
+include /usr/share/cdbs/1/class/makefile.mk
-include /usr/share/quilt/quilt.make
+CFLAGS += -c
-CFLAGS = -Wall -g
+clean::
+ $(RM) clustalw-mpi
-ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
- CFLAGS += -O0
-else
- CFLAGS += -O2
-endif
-ifeq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))
- INSTALL_PROGRAM += -s
-endif
-
-configure: configure-stamp
-configure-stamp:
- dh_testdir
- touch configure-stamp
-
-
-build: patch build-stamp
-
-build-stamp: configure-stamp
- dh_testdir
- $(MAKE)
- touch build-stamp
-
-clean-patched:
- dh_testdir
- dh_testroot
- rm -f build-stamp configure-stamp
- # Try only distclean if we are working on the patched source
- if grep -q distclean Makefile ; then $(MAKE) distclean ; fi
- dh_clean
-
-clean: clean-patched unpatch
-
-install: build
- dh_testdir
- dh_testroot
- dh_clean -k
- dh_installdirs
- $(MAKE) install DESTDIR=$(CURDIR)/debian/clustalw-mpi
-
-
-binary-indep: build install
-
-binary-arch: build install
- dh_testdir
- dh_testroot
- dh_installchangelogs
- dh_installdocs
- dh_installexamples
-# dh_install
-# dh_installmenu
-# dh_installdebconf
-# dh_installmime
-# dh_installinit
-# dh_installinfo
- dh_installman
- dh_link
- dh_strip
- dh_compress
- dh_fixperms
- dh_installdeb
- dh_shlibdeps
- dh_gencontrol
- dh_md5sums
- dh_builddeb
-
get-orig-source:
- wget http://kmlvli.com/kuobin/clustalw-mpi/clustalw-mpi-0.14.tar.gz && mv clustalw-mpi-0.14.tar.gz clustalw-mpi_0.14.orig.tar.gz
+ wget http://kmlvli.com/kuobin/clustalw-mpi/clustalw-mpi-0.15.tar.gz && mv clustalw-mpi-0.15.tar.gz clustalw-mpi_0.15.orig.tar.gz
-binary: binary-indep binary-arch
-.PHONY: build clean binary-indep binary-arch binary install configure get-orig-source
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