[med-svn] r2269 - trunk/packages/mgltools/molkit/trunk/debian
smoe-guest at alioth.debian.org
smoe-guest at alioth.debian.org
Sun Jul 20 10:44:49 UTC 2008
Author: smoe-guest
Date: 2008-07-20 10:44:48 +0000 (Sun, 20 Jul 2008)
New Revision: 2269
Modified:
trunk/packages/mgltools/molkit/trunk/debian/copyright
Log:
Seems fine.
Modified: trunk/packages/mgltools/molkit/trunk/debian/copyright
===================================================================
--- trunk/packages/mgltools/molkit/trunk/debian/copyright 2008-07-19 23:07:33 UTC (rev 2268)
+++ trunk/packages/mgltools/molkit/trunk/debian/copyright 2008-07-20 10:44:48 UTC (rev 2269)
@@ -1,51 +1,167 @@
This package was debianized by Steffen Moeller <moeller at debian.org> on
-Thu, 20 Dec 2007 16:27:31 +0100.
+Sun, 20 Jul 2008 10:24:55 +0200.
It was downloaded from http://mgltools.scripps.edu
-!!! This packaging is still experimental. The source contains
-!!! the third party software pdb2pqr which is currently being
-!!! prepared as an independent Debian package.
-!!! That software is GPLed but should not be distributed along
-!!! this package. This package does not allow the folder
-!!! containing pdb2pqr to be removed - not yet.
+Upstream Authors:
- Molecular Graphics Laboratory <mgltools at scripps.edu>
+ The main development is performed by the researchers
+ and developers at the
+ Molecular Graphics Laboratory <mgltools at scripps.edu>
+
+ led by
+
+ Michael F. Sanner <sanner at scripps.edu>
+
+ with contributions by
+
+ Ruth Huey <rhuey at scripps.edu>
+ Michael F. Sanner <sanner at scripps.edu>
+ Anna Omelchenko <annao at scripps.edu>
+ William M. Lindstrom
+ Kevin Chan
+ Sophie COON
+ Sowjanya Karnati
+ Garrett M. Morris <garrett at scripps.edu>
+ Sargis Dallakyan <sargis at scripps.edu>
+ Daniel Stoffler
+
+
+ External contributors for pdb2pqr which is also
+ available on http://sourceforge.net/projects/pdb2pqr
+ are
+
+ Jens Erik Nielsen <Jens.Nielsen at ucd.ie>
+ Todd Dolinsky <todd at ccb.wustl.edu>
+ Nathan A. Baker <baker at biochem.wustl.edu>
+ David J. Heisterberg <djh at osc.edu>
+ Mike Bradley
+
+ and the subpackage propka is contributed by
+
+ HUI LI
+ ANDREW D. ROBERTSON
+ JAN H. JENSEN
+ TODD DOLINSKY
+
+ which again comprises external contributions fro
+
+ Michael Holst
+
+ MALOC is written by Michael Holst
+
+ pdb2pqr/config/compile is written by Tom Tromey <tromey at cygnus.com>
+
+
Copyright:
- THE SCRIPPS RESEARCH INSTITUTE, <sanner at scripps.edu>
+ The respective authors and the Scripps Research Institute
+ 1992-2008 Michael Sanner <sanner at scripps.edu>
+ PDB2PQR is Copyrigth (C) Jens Erik Nielsen 2002-2003, UCSD/HHMI
+ and Copyright (c) 2002-2007. Washington University in St. Louis.
+
+ Dept. of Biochemistry and Molecular Biophysics
+ Center for Computational Biology
+ Washington University in St. Louis
+
+
+
+ MALOC = < Minimal Abstraction Layer for Object-oriented C > is
+ Copyright (C) 1994--2000 Michael Holst
+
+ pdb2pqr/config/compile is Copyright 1999, 2000 Free Software Foundation, Inc.
+ Written by Tom Tromey <tromey at cygnus.com>.
+
+ pdb2pqr/config/ltconfig is copyright (C) 1996-1999 Free Software Foundation, Inc.
+ Originally by Gordon Matzigkeit <gord at gnu.ai.mit.edu>, 1996
+
+ pdb2pqr/config/missing is copyright 1996, 1997, 1999, 2000 Free Software Foundation, Inc.
+ Originally by Fran,cois Pinard <pinard at iro.umontreal.ca>, 1996.
+
+
License:
- PLEASE READ THIS DOCUMENT CAREFULLY. IF YOU AGREE WITH THE TERMS
- AND CONDITIONS OF THIS LICENSE AGREEMENT, AND WISH TO RECEIVE AND
- USE THIS SOFTWARE.
+All files distributed or redistributed in this package are subject
+to the here presented license, regardless of the information
+that is explicitly stated or omitted in the respective files
+themselves. The original copyright holders have made respective
+agreements regarding this redistribution.
- 1. Grant Of Limited License; Software Use Restrictions. The programs
- received by you will be used only for NON COMMERCIAL SCIENTIFIC
- RESEARCH. This license is issued to you as an individual. For
- institution wide use or commercial use of the software you will
- have to follow the official registration procedure. To do so you can
- contact us by e-mail (sanner at scripps.edu), by mail (Michel Sanner,
- TSRI, Molecular Biology Department, MB5, 10666 North Torrey Pines
- Road, 92037 La Jolla) or by fax (858) 784-2860.
- Some of the components have their own licensing specificities
- that are described in the README file that is generated when you
- download the software. We request that you read the content of
- this file and comply to the requirements.
- 2. Copying Restrictions. You will not sell or otherwise transfer these
- programs or derivatives to any other party, whether with or
- without consideration, for any purpose.
- 3. Ownership of Software. You will not obtain, and will not attempt to
- obtain copyright coverage thereon without the express purpose
- written consent of The Scripps Research Institute.
- 4. Limitation Of Liability. You will hold harmless from all or any expenses
- you may incur as a result of or arising from your use, direct or indirect,
- of these materials. You understand that no other right or license
- to this program or its derivatives is granted or implied as a
- result of our transmission of same to you.
+ 1. Grant Of Limited License; Software Use Restrictions. The programs
+ received by you will be used only for NON COMMERCIAL purposes.
+ This license is issued to you as an individual.
-The Debian packaging is (C) 2007, Steffen Moeller <moeller at debian.org> and
-is licensed under the GPL, see `/usr/share/common-licenses/GPL'.
+ For COMMERCIAL use done with the software please contact Michel F.
+ Sanner for details about commercial usage license agreements.
+
+ For any question regarding license agreements, please contact
+ Michel Sanner:
+ TSRI, Molecular Biology Department, TCP 26,
+ 10550 North Torrey Pines Road, La Jolla, CA 92037
+ sanner at scripps.edu
+ tel (858) 784-7742
+ fax (858) 784-2341
+
+ 2. COMMERCIAL USAGE is defined as revenues generating activities. These
+ include using this software for consulting activities and selling
+ applications built on top of, or using this software. Scientific
+ research in an academic environment and teaching are considered
+ NON COMMERCIAL.
+
+ 3. Copying Restrictions. You will not sell or otherwise distribute commercially
+ these programs or derivatives to any other party, whether with or without
+ consideration.
+
+ 4. Ownership of Software. You will not obtain, and will not attempt to
+ obtain copyright coverage thereon without the express purpose written
+ consent of The Scripps Research Institute and Dr. Sanner.
+
+ 5. IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY
+ FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES
+ ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY
+ DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE
+ POSSIBILITY OF SUCH DAMAGE.
+
+ 6. THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES,
+ INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT. THIS SOFTWARE
+ IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE
+ NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR
+ MODIFICATIONS.
+
+ PDB2PQR is distributed under
+
+ the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+
+Comment by the package maintainer: it should however be noted,
+that recently upstream has changed their license to a more liberal
+license. PDB2PQR is currently being packaged for Debian, however there
+seems an incompatiblity to prevail and thus this separate package
+continues to be distributed with the mgltools.
+
+
+ MALOC and pdb2pqr/config/compile
+ come with the GPL license of version two or higher:
+
+ This program is free software; you can redistribute it and/or modify it
+ under the terms of the GNU General Public License as published by the
+ Free Software Foundation; either version 2 of the License, or (at your
+ option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+ ee the GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 675 Mass Ave, Cambridge, MA 02139, USA.
+
+
+The Debian packaging is (C) 2007-2008, Steffen Moeller <moeller at debian.org> and
+is licensed under the GPL, see '/usr/share/common-licenses/GPL'.
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