[med-svn] r2351 - trunk/community/infrastructure/getData

[smoe-guest at alioth.debian.org]

Author: smoe-guest
Date: 2008-07-28 12:31:31 +0000 (Mon, 28 Jul 2008)
New Revision: 2351

Modified:
   trunk/community/infrastructure/getData/Makefile
   trunk/community/infrastructure/getData/README
Log:
Added copyright info to Makfile.


Modified: trunk/community/infrastructure/getData/Makefile
===================================================================
--- trunk/community/infrastructure/getData/Makefile	2008-07-28 07:35:11 UTC (rev 2350)
+++ trunk/community/infrastructure/getData/Makefile	2008-07-28 12:31:31 UTC (rev 2351)
@@ -1,3 +1,25 @@
+#!/usr/bin/make -f
+
+# Copyright 2007-2008 Steffen Moeller <moeller at debian.org>
+#
+#   This package is free software; you can redistribute it and/or modify
+#   it under the terms of the GNU General Public License as published by
+#   the Free Software Foundation; either version 2 of the License, or
+#   (at your option) any later version.
+#
+#   This package is distributed in the hope that it will be useful,
+#   but WITHOUT ANY WARRANTY; without even the implied warranty of
+#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+#   GNU General Public License for more details.
+#
+#   You should have received a copy of the GNU General Public License
+#   along with this package; if not, write to the Free Software
+#   Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+#
+# On Debian systems, the complete text of the GNU General
+# Public License can be found in `/usr/share/common-licenses/GPL'.
+
+
 all: getData.1
 
 getData.1: getData

Modified: trunk/community/infrastructure/getData/README
===================================================================
--- trunk/community/infrastructure/getData/README	2008-07-28 07:35:11 UTC (rev 2350)
+++ trunk/community/infrastructure/getData/README	2008-07-28 12:31:31 UTC (rev 2351)
@@ -1,18 +1,26 @@
 getData
 =======
 
-While the community is discussing the possibility to prepared large Debian packages
-for the distribution of biological databases, this approach sets out to prepare such
-automatically - not the Debian package, but the provisioning of local updates and
-first installations of the data.
+While the community is discussing the possibility to prepared large Debian
+packages for the distribution of biological databases, this approach
+sets out to prepare such automatically - not the Debian package, but
+the provisioning of local updates and first installations of the data.
 
-Well performing should already be the swiss.dat (manually curated fraction of the
-UniProt protein sequence database) and trembl.dat (automated translating of
-coding sequences in the nucleotide sequence database EMBL). For sites that have
-the EMBOSS tool kit installed, also the respective indexing is performed.
+The download of the databases listed in getData should all
+remain functional. The major challenge is the integration with the
+post-processing of the data. In this respect well performing should
+already be the swiss.dat (manually curated fraction of the UniProt
+protein sequence database) and trembl.dat (automated translating of coding
+sequences in the nucleotide sequence database EMBL) entries. For sites
+that have the EMBOSS tool kit installed, also the respective indexing
+is performed.
 
 Please add databases for your purposes and let feedback fly in.
 
 Steffen Moeller
 
+This work was partially supported by the EU project "KnowARC", aiming
+at preparing computational grids also for smaller research groups in
+Bioniformatics. Read more on http://www.knowarc.eu.
+
 -- Steffen Moeller <moeller at debian.org>  Tue, 08 Jul 2008 12:33:06 +0200