[med-svn] r1537 - in trunk/packages/loki/tags: . 2.4.7.4-1
tille at alioth.debian.org
tille at alioth.debian.org
Fri Mar 7 09:09:25 UTC 2008
Author: tille
Date: 2008-03-07 09:09:24 +0000 (Fri, 07 Mar 2008)
New Revision: 1537
Added:
trunk/packages/loki/tags/2.4.7.4-1/
trunk/packages/loki/tags/2.4.7.4-1/README.Debian
trunk/packages/loki/tags/2.4.7.4-1/changelog
trunk/packages/loki/tags/2.4.7.4-1/check_het.1
trunk/packages/loki/tags/2.4.7.4-1/control
trunk/packages/loki/tags/2.4.7.4-1/copyright
trunk/packages/loki/tags/2.4.7.4-1/hist.1
trunk/packages/loki/tags/2.4.7.4-1/loki.1
trunk/packages/loki/tags/2.4.7.4-1/loki_count.1
trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1
trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1
trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1
trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1
trunk/packages/loki/tags/2.4.7.4-1/menu
trunk/packages/loki/tags/2.4.7.4-1/prep.1
trunk/packages/loki/tags/2.4.7.4-1/qavg.1
trunk/packages/loki/tags/2.4.7.4-1/rules
Removed:
trunk/packages/loki/tags/2.4.7.4-1/README.Debian
trunk/packages/loki/tags/2.4.7.4-1/changelog
trunk/packages/loki/tags/2.4.7.4-1/check_het.1
trunk/packages/loki/tags/2.4.7.4-1/control
trunk/packages/loki/tags/2.4.7.4-1/copyright
trunk/packages/loki/tags/2.4.7.4-1/hist.1
trunk/packages/loki/tags/2.4.7.4-1/loki.1
trunk/packages/loki/tags/2.4.7.4-1/loki_count.1
trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1
trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1
trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1
trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1
trunk/packages/loki/tags/2.4.7.4-1/menu
trunk/packages/loki/tags/2.4.7.4-1/prep.1
trunk/packages/loki/tags/2.4.7.4-1/qavg.1
trunk/packages/loki/tags/2.4.7.4-1/rules
Log:
Tagged current loki release
Copied: trunk/packages/loki/tags/2.4.7.4-1 (from rev 1533, trunk/packages/loki/trunk/debian)
Deleted: trunk/packages/loki/tags/2.4.7.4-1/README.Debian
===================================================================
--- trunk/packages/loki/trunk/debian/README.Debian 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/README.Debian 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,15 +0,0 @@
-loki for Debian
----------------
-
-Notice that the Perl scripts ("utils") provided with Loki have been renamed
-as follows:
-
- count.pl -> loki_count
- dist.pl -> loki_dist
- freq.pl -> loki_freq
- loki_ext.pl -> loki_ext
- sort_error.pl -> loki_sort_error
-
-so please be aware when reading the documentation and using these programs.
-
- -- Carleos Artime <carleos at pinon.ccu.uniovi.es>, Thu, 31 Oct 2002 17:22:58 +0100
Copied: trunk/packages/loki/tags/2.4.7.4-1/README.Debian (from rev 1536, trunk/packages/loki/trunk/debian/README.Debian)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/README.Debian (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/README.Debian 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,17 @@
+loki for Debian
+---------------
+
+Notice that the Perl scripts ("utils") provided with Loki have been renamed
+as follows:
+
+ count.pl -> loki_count
+ dist.pl -> loki_dist
+ freq.pl -> loki_freq
+ loki_ext.pl -> loki_ext
+ sort_error.pl -> loki_sort_error
+
+so please be aware when reading the documentation and using these programs.
+
+The package "loki-doc" contains full documentation for Loki.
+
+ -- Carleos Artime <carleos at uniovi.es>, 2004-09-24
Deleted: trunk/packages/loki/tags/2.4.7.4-1/changelog
===================================================================
--- trunk/packages/loki/trunk/debian/changelog 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/changelog 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,36 +0,0 @@
-loki (2.4.6-1) unstable; urgency=low
-
- * First official release
- closes: #155071
- * New upstream release.
- * Changed section in debian/control from "misc" to "science".
- * Added homepage to package description in debian/control.
- * Split up into two packages (loki, loki-doc).
- * Changes by Andreas Tille <tille at debian.org>
- - Added "Suggests: loki-doc" to loki
- - Changed "Depends" to "Suggests: loki" in loki-doc to enable
- reading online documentation without installing the binary package
- - used debian/loki-doc.docs and dh_installdocs to install documentation
- - moved debian/lokifaq.doc-base to debian/loki-doc.doc-base.lokifaq and
- debian/lokimanual.doc-base debian/loki-doc.doc-base.lokimanual
- - Added debian/loci-doc.README.Debian to give a hint at the LaTeX
- source of the documentation.
-
- -- Carleos Artime <carleos at pinon.ccu.uniovi.es> Fri, 25 Apr 2003 18:56:57 +0200
-
-loki (2.4.5-1) unstable; urgency=low
-
- * Initial Release.
- * Having read "man dh_installdocs", split "debian/doc-base" in two files.
- * Included a "menu" entry that simply shows loki's man page.
- * Renamed utils/loki_ext.in to utils/ext.in.
- * Modified utils/Makefile.in to rename executables: count.pl, dist.pl,
- freq.pl, loki_ext.pl, sort_error.pl, are now loki_count, loki_dist,
- loki_freq, loki_ext, and loki_sort_error.
- * Fixed copyright-lists-upstream-authors-with-dh_make-boilerplate bug
- by just removing (s) behind Author
- * Appended upstream COPYRIGHT to debian/copyright to get it included
- into the Debian package
- * Standards-Version: 3.5.9
-
- -- Carleos Artime <carleos at pinon.ccu.uniovi.es> Sat, 5 Apr 2003 18:56:57 +0200
Copied: trunk/packages/loki/tags/2.4.7.4-1/changelog (from rev 1536, trunk/packages/loki/trunk/debian/changelog)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/changelog (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/changelog 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,45 @@
+loki (2.4.7.4-1) unstable; urgency=low
+
+ * New upstream release
+ closes: #254166
+ * Added a hint about loki-doc package in README.Debian.
+ * Standards-Version: 3.6.1
+
+ -- Carleos Artime <carleos at uniovi.es> Fri, 24 Sep 2004 15:15:27 +0000
+
+loki (2.4.6-1) unstable; urgency=low
+
+ * First official release
+ closes: #155071
+ * New upstream release.
+ * Changed section in debian/control from "misc" to "science".
+ * Added homepage to package description in debian/control.
+ * Split up into two packages (loki, loki-doc).
+ * Changes by Andreas Tille <tille at debian.org>
+ - Added "Suggests: loki-doc" to loki
+ - Changed "Depends" to "Suggests: loki" in loki-doc to enable
+ reading online documentation without installing the binary package
+ - used debian/loki-doc.docs and dh_installdocs to install documentation
+ - moved debian/lokifaq.doc-base to debian/loki-doc.doc-base.lokifaq and
+ debian/lokimanual.doc-base debian/loki-doc.doc-base.lokimanual
+ - Added debian/loci-doc.README.Debian to give a hint at the LaTeX
+ source of the documentation.
+
+ -- Carleos Artime <carleos at pinon.ccu.uniovi.es> Fri, 25 Apr 2003 18:56:57 +0200
+
+loki (2.4.5-1) unstable; urgency=low
+
+ * Initial Release.
+ * Having read "man dh_installdocs", split "debian/doc-base" in two files.
+ * Included a "menu" entry that simply shows loki's man page.
+ * Renamed utils/loki_ext.in to utils/ext.in.
+ * Modified utils/Makefile.in to rename executables: count.pl, dist.pl,
+ freq.pl, loki_ext.pl, sort_error.pl, are now loki_count, loki_dist,
+ loki_freq, loki_ext, and loki_sort_error.
+ * Fixed copyright-lists-upstream-authors-with-dh_make-boilerplate bug
+ by just removing (s) behind Author
+ * Appended upstream COPYRIGHT to debian/copyright to get it included
+ into the Debian package
+ * Standards-Version: 3.5.9
+
+ -- Carleos Artime <carleos at pinon.ccu.uniovi.es> Sat, 5 Apr 2003 18:56:57 +0200
Deleted: trunk/packages/loki/tags/2.4.7.4-1/check_het.1
===================================================================
--- trunk/packages/loki/trunk/debian/check_het.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/check_het.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/check_het.1 (from rev 1536, trunk/packages/loki/trunk/debian/check_het.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/check_het.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/check_het.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/control
===================================================================
--- trunk/packages/loki/trunk/debian/control 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/control 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,29 +0,0 @@
-Source: loki
-Section: science
-Priority: optional
-Maintainer: Carleos Artime <carleos at pinon.ccu.uniovi.es>
-Build-Depends: debhelper (>> 4.0.0)
-Standards-Version: 3.5.9
-XBCS-URL: http://loki.homeunix.net.
-
-Package: loki
-Architecture: any
-Depends: ${shlibs:Depends}
-Suggests: loki-doc
-Description: [Biology] MCMC linkage analysis on general pedigrees
- Performs Markov chain Monte Carlo multipoint linkage analysis on large,
- complex pedigrees. The current package supports analyses on quantitative
- traits only, although this restriction will be lifted in later versions.
- Joint estimation of QTL number, position and effects uses Reversible Jump
- MCMC. It is also possible to perform affected only IBD sharing analyses.
- .
- Homepage: http://loki.homeunix.net.
-
-Package: loki-doc
-Architecture: all
-Suggests: loki
-Description: [Biology] Postscript manual for loki
- Documentation on how to use Simon Heath's "prep" and "loki" tools
- for MCMC genetic linkage and IBD analysis on general pedigrees.
- .
- Homepage: http://loki.homeunix.net.
\ No newline at end of file
Copied: trunk/packages/loki/tags/2.4.7.4-1/control (from rev 1536, trunk/packages/loki/trunk/debian/control)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/control (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/control 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,29 @@
+Source: loki
+Section: science
+Priority: optional
+Maintainer: Carleos Artime <carleos at uniovi.es>
+Build-Depends: debhelper (>> 4.0.0)
+Standards-Version: 3.6.1
+XBCS-URL: http://loki.homeunix.net
+
+Package: loki
+Architecture: any
+Depends: ${shlibs:Depends}
+Suggests: loki-doc
+Description: [Biology] MCMC linkage analysis on general pedigrees
+ Performs Markov chain Monte Carlo multipoint linkage analysis on large,
+ complex pedigrees. The current package supports analyses on quantitative
+ traits only, although this restriction will be lifted in later versions.
+ Joint estimation of QTL number, position and effects uses Reversible Jump
+ MCMC. It is also possible to perform affected only IBD sharing analyses.
+ .
+ Homepage: http://loki.homeunix.net.
+
+Package: loki-doc
+Architecture: all
+Suggests: loki
+Description: [Biology] Postscript manual for loki
+ Documentation on how to use Simon Heath's "prep" and "loki" tools
+ for MCMC genetic linkage and IBD analysis on general pedigrees.
+ .
+ Homepage: http://loki.homeunix.net.
Deleted: trunk/packages/loki/tags/2.4.7.4-1/copyright
===================================================================
--- trunk/packages/loki/trunk/debian/copyright 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/copyright 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,35 +0,0 @@
-This package was debianized by Carleos Artime <carleos at pinon.ccu.uniovi.es> on
-Thu, 31 Oct 2002 17:22:58 +0100.
-
-It was downloaded from http://loki.homeunix.net.
-
-Upstream Author: Simon C. Heath <heath at cng.fr>
-
-Copyright:
-
-(c) 1997-2002 by Simon C. Heath.
-
-Loki source is available under a modified version of the BSD license:
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions
-are met:
-
-Redistributions of source code must retain the above copyright
-notice, this list of conditions and the following disclaimer.
-Redistributions in binary form must reproduce the above copyright
-notice, this list of conditions and the following disclaimer in the
-documentation and/or other materials provided with the distribution.
-The name of the author may not be used to endorse or promote products
-derived from this software without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR
-IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
-OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
-IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT,
-INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
-NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
-THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Copied: trunk/packages/loki/tags/2.4.7.4-1/copyright (from rev 1536, trunk/packages/loki/trunk/debian/copyright)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/copyright (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/copyright 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,35 @@
+This package was debianized by Carleos Artime <carleos at uniovi.es>
+on 2004-09-24.
+
+It was downloaded from http://loki.homeunix.net.
+
+Upstream Author: Simon C. Heath <heath at cng.fr>
+
+Copyright:
+
+(c) 1997-2004 by Simon C. Heath.
+
+Loki source is available under a modified version of the BSD license:
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions
+are met:
+
+Redistributions of source code must retain the above copyright
+notice, this list of conditions and the following disclaimer.
+Redistributions in binary form must reproduce the above copyright
+notice, this list of conditions and the following disclaimer in the
+documentation and/or other materials provided with the distribution.
+The name of the author may not be used to endorse or promote products
+derived from this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR
+IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
+OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
+IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT,
+INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
+NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
+THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
+THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Deleted: trunk/packages/loki/tags/2.4.7.4-1/hist.1
===================================================================
--- trunk/packages/loki/trunk/debian/hist.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/hist.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/hist.1 (from rev 1536, trunk/packages/loki/trunk/debian/hist.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/hist.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/hist.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/loki.1
===================================================================
--- trunk/packages/loki/trunk/debian/loki.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/.
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/loki.1 (from rev 1536, trunk/packages/loki/trunk/debian/loki.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/loki.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/.
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/loki_count.1
===================================================================
--- trunk/packages/loki/trunk/debian/loki_count.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_count.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/loki_count.1 (from rev 1536, trunk/packages/loki/trunk/debian/loki_count.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/loki_count.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_count.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1
===================================================================
--- trunk/packages/loki/trunk/debian/loki_dist.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1 (from rev 1536, trunk/packages/loki/trunk/debian/loki_dist.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_dist.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1
===================================================================
--- trunk/packages/loki/trunk/debian/loki_ext.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1 (from rev 1536, trunk/packages/loki/trunk/debian/loki_ext.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_ext.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1
===================================================================
--- trunk/packages/loki/trunk/debian/loki_freq.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1 (from rev 1536, trunk/packages/loki/trunk/debian/loki_freq.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_freq.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1
===================================================================
--- trunk/packages/loki/trunk/debian/loki_sort_error.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1 (from rev 1536, trunk/packages/loki/trunk/debian/loki_sort_error.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/loki_sort_error.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/menu
===================================================================
--- trunk/packages/loki/trunk/debian/menu 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/menu 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,2 +0,0 @@
-?package(loki):needs=text section=Apps/Science\
- title="loki" command="man loki"
Copied: trunk/packages/loki/tags/2.4.7.4-1/menu (from rev 1536, trunk/packages/loki/trunk/debian/menu)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/menu (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/menu 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,2 @@
+?package(loki):needs="text" section="Apps/Science"\
+ title="loki" command="man loki"
Deleted: trunk/packages/loki/tags/2.4.7.4-1/prep.1
===================================================================
--- trunk/packages/loki/trunk/debian/prep.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/prep.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/prep.1 (from rev 1536, trunk/packages/loki/trunk/debian/prep.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/prep.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/prep.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/qavg.1
===================================================================
--- trunk/packages/loki/trunk/debian/qavg.1 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/qavg.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,58 +0,0 @@
-.\" Hey, EMACS: -*- nroff -*-
-.\" First parameter, NAME, should be all caps
-.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
-.\" other parameters are allowed: see man(7), man(1)
-.TH LOKI 1 "october 31, 2002"
-.\" Please adjust this date whenever revising the manpage.
-.\"
-.\" Some roff macros, for reference:
-.\" .nh disable hyphenation
-.\" .hy enable hyphenation
-.\" .ad l left justify
-.\" .ad b justify to both left and right margins
-.\" .nf disable filling
-.\" .fi enable filling
-.\" .br insert line break
-.\" .sp <n> insert n+1 empty lines
-.\" for manpage-specific macros, see man(7)
-.SH NAME
-loki \- Reversible jump MCMC linkage analysis in general pedigrees
-.SH SYNOPSIS
-.B prep
-.RI controlfile
-.br
-.B loki
-.RI -v
-.br
-.B loki
-.RI paramfile
-.SH DESCRIPTION
-This manual page documents briefly the
-.B prep
-and
-.B loki
-commands. Other post-hoc analysis scripts are available; please see
-the complete documentation.
-This manual page was written for the Debian GNU/Linux distribution
-because the original program does not have a manual page.
-Instead, it has documentation in PostScript format; see below.
-.PP
-.\" TeX users may be more comfortable with the \fB<whatever>\fP and
-.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
-.\" respectively.
-\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
-analysis on possibly large and complex pedigrees, by means of a Reversible
-Jump Markov Chain Monte Carlo technique.
-\fBprep\fP performs previous data preparation.
-.SH OPTIONS
-.TP
-.B \-v
-Show version of the program.
-.SH SEE ALSO
-The programs are documented fully in
-.IR /usr/share/doc/loki/,
-available on-line at
-.IR http://loki.homeunix.net/ .
-.SH AUTHOR
-This manual page was written by Carleos Artime <carleos at pinon.ccu.uniovi.es>,
-for the Debian GNU/Linux system (but may be used by others).
Copied: trunk/packages/loki/tags/2.4.7.4-1/qavg.1 (from rev 1536, trunk/packages/loki/trunk/debian/qavg.1)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/qavg.1 (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/qavg.1 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,58 @@
+.\" Hey, EMACS: -*- nroff -*-
+.\" First parameter, NAME, should be all caps
+.\" Second parameter, SECTION, should be 1-8, maybe w/ subsection
+.\" other parameters are allowed: see man(7), man(1)
+.TH LOKI 1 "2004-09-24"
+.\" Please adjust this date whenever revising the manpage.
+.\"
+.\" Some roff macros, for reference:
+.\" .nh disable hyphenation
+.\" .hy enable hyphenation
+.\" .ad l left justify
+.\" .ad b justify to both left and right margins
+.\" .nf disable filling
+.\" .fi enable filling
+.\" .br insert line break
+.\" .sp <n> insert n+1 empty lines
+.\" for manpage-specific macros, see man(7)
+.SH NAME
+loki \- Reversible jump MCMC linkage analysis in general pedigrees
+.SH SYNOPSIS
+.B prep
+.RI controlfile
+.br
+.B loki
+.RI -v
+.br
+.B loki
+.RI paramfile
+.SH DESCRIPTION
+This manual page documents briefly the
+.B prep
+and
+.B loki
+commands. Other post-hoc analysis scripts are available; please see
+the complete documentation.
+This manual page was written for the Debian GNU/Linux distribution
+because the original program does not have a manual page.
+Instead, it has documentation in PostScript format; see below.
+.PP
+.\" TeX users may be more comfortable with the \fB<whatever>\fP and
+.\" \fI<whatever>\fP escape sequences to invode bold face and italics,
+.\" respectively.
+\fBloki\fP, written by Simon C. Heath, implements segregation and linkage
+analysis on possibly large and complex pedigrees, by means of a Reversible
+Jump Markov Chain Monte Carlo technique.
+\fBprep\fP performs previous data preparation.
+.SH OPTIONS
+.TP
+.B \-v
+Show version of the program.
+.SH SEE ALSO
+The programs are documented fully in
+.IR /usr/share/doc/loki/,
+available on-line at
+.IR http://loki.homeunix.net/ .
+.SH AUTHOR
+This manual page was written by Carleos Artime <carleos at uniovi.es>,
+for the Debian GNU/Linux system (but may be used by others).
Deleted: trunk/packages/loki/tags/2.4.7.4-1/rules
===================================================================
--- trunk/packages/loki/trunk/debian/rules 2008-03-07 07:46:36 UTC (rev 1533)
+++ trunk/packages/loki/tags/2.4.7.4-1/rules 2008-03-07 09:09:24 UTC (rev 1537)
@@ -1,115 +0,0 @@
-#!/usr/bin/make -f
-# debian/rules for loki
-# Carleos Artime (carleos at pinon.ccu.uniovi.es)
-# GPL
-
-# added after Andreas Tille's Makefile for fastlink:
-pkg=loki
-doc=$(pkg)-doc
-
-# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
-
-# These are used for cross-compiling and for saving the configure script
-# from having to guess our platform (since we know it already)
-DEB_HOST_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
-DEB_BUILD_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
-
-
-ifneq (,$(findstring debug,$(DEB_BUILD_OPTIONS)))
- CFLAGS += -g
-endif
-ifeq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))
- INSTALL_PROGRAM += -s
-endif
-
-config.status: configure
- dh_testdir
- # Add here commands to configure the package.
- ./configure --host=$(DEB_HOST_GNU_TYPE) --build=$(DEB_BUILD_GNU_TYPE) --prefix=/usr --mandir=\$${prefix}/share/man --infodir=\$${prefix}/share/info
-
-
-build: build-stamp
-
-build-stamp: config.status
- dh_testdir
-
- # Add here commands to compile the package.
- $(MAKE)
- #/usr/bin/docbook-to-man debian/loki.sgml > loki.1
-
- touch build-stamp
-
-clean:
- dh_testdir
- dh_testroot
- rm -f build-stamp
-
- # Add here commands to clean up after the build process.
- -$(MAKE) distclean
- -test -r /usr/share/misc/config.sub && \
- cp -f /usr/share/misc/config.sub config.sub
- -test -r /usr/share/misc/config.guess && \
- cp -f /usr/share/misc/config.guess config.guess
-
-
- dh_clean
-
-install: build
- dh_testdir
- dh_testroot
- dh_clean -k
- dh_installdirs
-
- # Add here commands to install the package into debian/loki.
- $(MAKE) install prefix=$(CURDIR)/debian/loki/usr
-
- # Added after fastlink's makefile to split up into two packages:
-# mkdir -p `pwd`/debian/$(doc)/usr/share/doc/$(pkg)/docs
-# cp -a `pwd`/docs/*.ps `pwd`/debian/$(doc)/usr/share/doc/$(pkg)/docs
-# ln -s $(pkg) `pwd`/debian/$(doc)/usr/share/doc/$(doc)
-
-# Build architecture-independent files here.
-binary-indep: build install
- dh_testdir -i
- dh_testroot -i
-# dh_installdebconf
- dh_installdocs -i
- dh_installchangelogs -i
- dh_link -i
-# dh_strip
- dh_compress -i
- dh_fixperms -i
-# dh_makeshlibs
- dh_installdeb -i
-# dh_perl
-# dh_shlibdeps
- dh_gencontrol -i
- dh_md5sums -i
- dh_builddeb -i
-
-
-# Build architecture-dependent files here.
-binary-arch: build install
- dh_testdir -a
- dh_testroot -a
-# dh_installdebconf
- dh_installdocs -a
-# dh_installexamples
- dh_installmenu -a
- dh_installman -a debian/*.1
- dh_installchangelogs -a Changes
- dh_link -a
- dh_strip -a
- dh_compress -a
- dh_fixperms -a
-# dh_makeshlibs
- dh_installdeb -a
-# dh_perl
- dh_shlibdeps -a
- dh_gencontrol -a
- dh_md5sums -a
- dh_builddeb -a
-
-binary: binary-indep binary-arch
-.PHONY: build clean binary-indep binary-arch binary install
Copied: trunk/packages/loki/tags/2.4.7.4-1/rules (from rev 1536, trunk/packages/loki/trunk/debian/rules)
===================================================================
--- trunk/packages/loki/tags/2.4.7.4-1/rules (rev 0)
+++ trunk/packages/loki/tags/2.4.7.4-1/rules 2008-03-07 09:09:24 UTC (rev 1537)
@@ -0,0 +1,115 @@
+#!/usr/bin/make -f
+# debian/rules for loki
+# Carleos Artime (carleos at uniovi.es)
+# GPL
+
+# added after Andreas Tille's Makefile for fastlink:
+pkg=loki
+doc=$(pkg)-doc
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+# These are used for cross-compiling and for saving the configure script
+# from having to guess our platform (since we know it already)
+DEB_HOST_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
+DEB_BUILD_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
+
+
+ifneq (,$(findstring debug,$(DEB_BUILD_OPTIONS)))
+ CFLAGS += -g
+endif
+ifeq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))
+ INSTALL_PROGRAM += -s
+endif
+
+config.status: configure
+ dh_testdir
+ # Add here commands to configure the package.
+ ./configure --host=$(DEB_HOST_GNU_TYPE) --build=$(DEB_BUILD_GNU_TYPE) --prefix=/usr --mandir=\$${prefix}/share/man --infodir=\$${prefix}/share/info
+
+
+build: build-stamp
+
+build-stamp: config.status
+ dh_testdir
+
+ # Add here commands to compile the package.
+ $(MAKE)
+ #/usr/bin/docbook-to-man debian/loki.sgml > loki.1
+
+ touch build-stamp
+
+clean:
+ dh_testdir
+ dh_testroot
+ rm -f build-stamp
+
+ # Add here commands to clean up after the build process.
+ -$(MAKE) distclean
+ -test -r /usr/share/misc/config.sub && \
+ cp -f /usr/share/misc/config.sub config.sub
+ -test -r /usr/share/misc/config.guess && \
+ cp -f /usr/share/misc/config.guess config.guess
+
+
+ dh_clean
+
+install: build
+ dh_testdir
+ dh_testroot
+ dh_clean -k
+ dh_installdirs
+
+ # Add here commands to install the package into debian/loki.
+ $(MAKE) install prefix=$(CURDIR)/debian/loki/usr
+
+ # Added after fastlink's makefile to split up into two packages:
+# mkdir -p `pwd`/debian/$(doc)/usr/share/doc/$(pkg)/docs
+# cp -a `pwd`/docs/*.ps `pwd`/debian/$(doc)/usr/share/doc/$(pkg)/docs
+# ln -s $(pkg) `pwd`/debian/$(doc)/usr/share/doc/$(doc)
+
+# Build architecture-independent files here.
+binary-indep: build install
+ dh_testdir -i
+ dh_testroot -i
+# dh_installdebconf
+ dh_installdocs -i
+ dh_installchangelogs -i
+ dh_link -i
+# dh_strip
+ dh_compress -i
+ dh_fixperms -i
+# dh_makeshlibs
+ dh_installdeb -i
+# dh_perl
+# dh_shlibdeps
+ dh_gencontrol -i
+ dh_md5sums -i
+ dh_builddeb -i
+
+
+# Build architecture-dependent files here.
+binary-arch: build install
+ dh_testdir -a
+ dh_testroot -a
+# dh_installdebconf
+ dh_installdocs -a
+# dh_installexamples
+ dh_installmenu -a
+ dh_installman -a debian/*.1
+ dh_installchangelogs -a Changes
+ dh_link -a
+ dh_strip -a
+ dh_compress -a
+ dh_fixperms -a
+# dh_makeshlibs
+ dh_installdeb -a
+# dh_perl
+ dh_shlibdeps -a
+ dh_gencontrol -a
+ dh_md5sums -a
+ dh_builddeb -a
+
+binary: binary-indep binary-arch
+.PHONY: build clean binary-indep binary-arch binary install
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