[med-svn] r3309 - trunk/packages/glam2/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2009-04-21 12:52:03 +0000 (Tue, 21 Apr 2009)
New Revision: 3309

Added:
   trunk/packages/glam2/trunk/debian/reference
Modified:
   trunk/packages/glam2/trunk/debian/changelog
   trunk/packages/glam2/trunk/debian/control
Log:
Simplified long description and moved bibliographic references to a new file. 


Modified: trunk/packages/glam2/trunk/debian/changelog
===================================================================
--- trunk/packages/glam2/trunk/debian/changelog	2009-04-21 11:21:14 UTC (rev 3308)
+++ trunk/packages/glam2/trunk/debian/changelog	2009-04-21 12:52:03 UTC (rev 3309)
@@ -1,3 +1,10 @@
+glam2 (1064-2) unstable; urgency=low
+
+  * debian/control, debian/reference: simplified long description and moved
+    bibliographic references to a new file. 
+
+ -- Charles Plessy <plessy at debian.org>  Tue, 21 Apr 2009 21:49:54 +0900
+
 glam2 (1064-1) unstable; urgency=low
 
   [ Charles Plessy ]

Modified: trunk/packages/glam2/trunk/debian/control
===================================================================
--- trunk/packages/glam2/trunk/debian/control	2009-04-21 11:21:14 UTC (rev 3308)
+++ trunk/packages/glam2/trunk/debian/control	2009-04-21 12:52:03 UTC (rev 3309)
@@ -19,17 +19,11 @@
  pattern: typical examples are the TATA box and the CAAX prenylation motif. The
  main innovation of GLAM2 is that it allows insertions and deletions in motifs.
  .
- The package includes these programs:
-  glam2:       discovering motifs shared by a set of sequences;
-  glam2scan:   finding matches, in a sequence database, to a motif discovered
-               by glam2;
-  glam2format: converting glam2 motifs to  standard alignment formats;
-  glam2mask:   masking glam2 motifs out of sequences, so that weaker motifs
-               can be found;
-  glam2-purge: removing highly similar members of a set of sequences.
+ This package includes programs for discovering motifs shared by a set of
+ sequences and finding matches to these motifs in a sequence database, as well
+ as utilities for converting glam2 motifs to standard alignment formats,
+ masking glam2 motifs out of sequences so that weaker motifs can be found, and
+ removing highly similar members of a set of sequences.
  .
- In this package, the fast Fourier algorithm (FFT) was enabled for glam2.
- .
- If you use GLAM2, please cite: MC Frith, NFW Saunders, B Kobe, TL Bailey
- (2008) Discovering sequence motifs with arbitrary insertions and deletions,
- PLoS Computational Biology (in press).
+ In this binary package, the fast Fourier algorithm (FFT) was enabled for the
+ glam2 program.

Added: trunk/packages/glam2/trunk/debian/reference
===================================================================
--- trunk/packages/glam2/trunk/debian/reference	                        (rev 0)
+++ trunk/packages/glam2/trunk/debian/reference	2009-04-21 12:52:03 UTC (rev 3309)
@@ -0,0 +1,13 @@
+ at article{10.1371/journal.pcbi.1000071,
+    author = {Frith, Martin C. AND Saunders, Neil F. W. AND Kobe, Bostjan AND Bailey, Timothy L.},
+    journal = {PLoS Comput Biol},
+    publisher = {Public Library of Science},
+    title = {Discovering Sequence Motifs with Arbitrary Insertions and Deletions},
+    year = {2008},
+    month = {05},
+    volume = {4},
+    url = {http://dx.plos.org/10.1371%2Fjournal.pcbi.1000071},
+    pages = {e1000071},
+    number = {5},
+    doi = {10.1371/journal.pcbi.1000071}
+}


Property changes on: trunk/packages/glam2/trunk/debian/reference
___________________________________________________________________
Added: svn:mergeinfo
   +