[med-svn] r2944 - in trunk/packages/libbio-graphics-perl/trunk: . debian

plessy at alioth.debian.org plessy at alioth.debian.org
Sat Jan 10 10:25:06 UTC 2009 

Author: plessy
Date: 2009-01-10 10:25:06 +0000 (Sat, 10 Jan 2009)
New Revision: 2944

Added:
   trunk/packages/libbio-graphics-perl/trunk/debian/
   trunk/packages/libbio-graphics-perl/trunk/debian/changelog
   trunk/packages/libbio-graphics-perl/trunk/debian/compat
   trunk/packages/libbio-graphics-perl/trunk/debian/control
   trunk/packages/libbio-graphics-perl/trunk/debian/copyright
   trunk/packages/libbio-graphics-perl/trunk/debian/rules
   trunk/packages/libbio-graphics-perl/trunk/debian/watch
Log:
[svn-inject] Applying Debian modifications to trunk


Property changes on: trunk/packages/libbio-graphics-perl/trunk/debian
___________________________________________________________________
Name: mergeWithUpstream
   + 1

Added: trunk/packages/libbio-graphics-perl/trunk/debian/changelog
===================================================================
--- trunk/packages/libbio-graphics-perl/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/libbio-graphics-perl/trunk/debian/changelog	2009-01-10 10:25:06 UTC (rev 2944)
@@ -0,0 +1,5 @@
+libbio-graphics-perl (1.82-1) UNRELEASED; urgency=low
+
+  * Initial Release.
+
+ -- Charles Plessy <plessy at debian.org>  Sat, 10 Jan 2009 17:49:21 +0900

Added: trunk/packages/libbio-graphics-perl/trunk/debian/compat
===================================================================
--- trunk/packages/libbio-graphics-perl/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/libbio-graphics-perl/trunk/debian/compat	2009-01-10 10:25:06 UTC (rev 2944)
@@ -0,0 +1 @@
+7

Added: trunk/packages/libbio-graphics-perl/trunk/debian/control
===================================================================
--- trunk/packages/libbio-graphics-perl/trunk/debian/control	                        (rev 0)
+++ trunk/packages/libbio-graphics-perl/trunk/debian/control	2009-01-10 10:25:06 UTC (rev 2944)
@@ -0,0 +1,25 @@
+Source: libbio-graphics-perl
+Section: perl
+Priority: optional
+Build-Depends: debhelper (>= 7), libmodule-build-perl
+Build-Depends-Indep: perl (>= 5.6.10-12)
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+DM-Upload-Allowed: yes
+Uploaders: Charles Plessy <plessy at debian.org>
+Standards-Version: 3.8.0
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/libbio-graphics-perl/trunk/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/libbio-graphics-perl/trunk/
+Homepage: http://search.cpan.org/dist/Bio-Graphics/
+
+Package: libbio-graphics-perl
+Architecture: all
+Depends: ${perl:Depends}, ${misc:Depends}, bioperl (>= 1.5.9.1), libgd-gd2-noxpm-perl (>= 2.3)
+Conflicts: bioperl ( < 1.5.9.1)
+Description: Generate GD images of Bio::Seq objects
+ The Bio::Graphics::Panel class provides drawing and formatting
+ services for any object that implements the Bio::SeqFeatureI
+ interface, including Ace::Sequence::Feature, Das::Segment::Feature and
+ Bio::DB::Graphics objects.  It can be used to draw sequence
+ annotations, physical (contig) maps, protein domains, or any other
+ type of map in which a set of discrete ranges need to be laid out on
+ the number line.

Added: trunk/packages/libbio-graphics-perl/trunk/debian/copyright
===================================================================
--- trunk/packages/libbio-graphics-perl/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/libbio-graphics-perl/trunk/debian/copyright	2009-01-10 10:25:06 UTC (rev 2944)
@@ -0,0 +1,79 @@
+Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat?action=recall&rev=423
+Upstream-Name: Bio::Graphics
+Upstream-Maintainer: Lincoln Stein <lincoln.stein at oicr.on.ca>
+Upstream-Source: http://search.cpan.org/CPAN/authors/id/L/LD/LDS/Bio-Graphics-1.82.tar.gz
+
+Files: *
+Copyright: © 2001-2008 Cold Spring Harbor Laboratory
+License: GPL-1+ | Artistic
+ This library is free software; you can redistribute it and/or modify
+ it under the same terms as Perl itself.  See the Artistic License file
+ in the main Perl distribution for specific terms and conditions of
+ use.  In addition, the following disclaimers apply:
+ .
+ CSHL makes no representations whatsoever as to the SOFTWARE contained
+ herein.  It is experimental in nature and is provided WITHOUT WARRANTY
+ OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE OR ANY OTHER
+ WARRANTY, EXPRESS OR IMPLIED.  CSHL MAKES NO REPRESENTATION OR
+ WARRANTY THAT THE USE OF THIS SOFTWARE WILL NOT INFRINGE ANY PATENT OR
+ OTHER PROPRIETARY RIGHT.
+ .
+ By downloading this SOFTWARE, your Institution hereby indemnifies CSHL
+ against any loss, claim, damage or liability, of whatsoever kind or
+ nature, which may arise from your Institution's respective use,
+ handling or storage of the SOFTWARE.
+ .
+ If publications result from research using this SOFTWARE, we ask that
+ CSHL be acknowledged and/or credit be given to CSHL scientists, as
+ scientifically appropriate.
+X-Comment: Perl license
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of either:
+ .
+ a) the GNU General Public License as published by the Free Software
+    Foundation; either version 1, or (at your option) any later
+    version, or
+ .
+ b) the "Artistic License" which comes with Perl.
+X-Comment: On Debian systems, the complete text of the Artistic License can be
+ found in `/usr/share/common-licenses/Artistic', and the complete text of the
+ GNU General Public License can be found in `/usr/share/common-licenses/GPL'.
+
+Files: lib/Bio/Graphics/Glyph/rndrect.pm
+       lib/Bio/Graphics/Glyph/splice_site.pm
+       lib/Bio/Graphics/Glyph/extending_arrow.pm
+Copyright: © 2001 Berkeley Drosophila Genome Project
+License: GPL-1+ | Artistic
+ (see above)
+
+Files: lib/Bio/Graphics/Pictogram.pm
+Copyright: © Shawn Hoon
+License: GPL-1+ | Artistic
+ (see above)
+
+Files: lib/Bio/Graphics/RendererI.pm
+Copyright: © 2003 Institute for Systems Biology
+License: GPL-1+ | Artistic
+ (see above)
+
+Files: lib/Bio/Graphics/ConfiguratorI.pm
+Copyright: © Robert Hubley
+License: GPL-1+ | Artistic
+ (see above)
+
+Files: debian/*
+Copyright: © 2009 Charles Plessy <plessy at debian.org>
+License: Poetic
+ This work ‘as-is’ we provide.
+ No warranty, express or implied.
+ We’ve done our best,
+ to debug and test.
+ Liability for damages denied.
+ .
+ Permission is granted hereby,
+ to copy, share, and modify.
+ Use as is fit,
+ free or for profit.
+ On this notice these rights rely.
+X-Comment: The text of this license is © 2005 Alexander E Genaud,
+ see `http://genaud.net/2005/10/poetic-license/'.

Added: trunk/packages/libbio-graphics-perl/trunk/debian/rules
===================================================================
--- trunk/packages/libbio-graphics-perl/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/libbio-graphics-perl/trunk/debian/rules	2009-01-10 10:25:06 UTC (rev 2944)
@@ -0,0 +1,64 @@
+#!/usr/bin/make -f
+# This debian/rules file is provided as a template for normal perl
+# packages. It was created by Marc Brockschmidt <marc at dch-faq.de> for
+# the Debian Perl Group (http://pkg-perl.alioth.debian.org/) but may
+# be used freely wherever it is useful.
+#
+# It was later modified by Jason Kohles <email at jasonkohles.com>
+# http://www.jasonkohles.com/ to support Module::Build installed modules
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+# If set to a true value then MakeMaker's prompt function will
+# always return the default without waiting for user input.
+export PERL_MM_USE_DEFAULT=1
+
+PERL   ?= /usr/bin/perl
+PACKAGE = $(shell dh_listpackages)
+TMP     = $(CURDIR)/debian/$(PACKAGE)
+
+build: build-stamp
+build-stamp:
+	dh_testdir
+	# Add commands to compile the package here
+	$(PERL) Build.PL installdirs=vendor
+	$(PERL) Build
+	$(PERL) Build test
+	touch $@
+
+clean:
+	dh_testdir
+	dh_testroot
+	dh_clean build-stamp install-stamp
+	# Add commands to clean up after the build process here
+	[ ! -f Build ] || $(PERL) Build --allow_mb_mismatch 1 distclean
+
+install: install-stamp
+install-stamp: build-stamp
+	dh_testdir
+	dh_testroot
+	dh_clean -k
+	# Add commands to install the package into $(TMP) here
+	$(PERL) Build install destdir=$(TMP) create_packlist=0
+	touch $@
+
+binary-arch:
+# We have nothing to do here for an architecture-independent package
+
+binary-indep: build install
+	dh_testdir
+	dh_testroot
+	dh_installdocs README
+	dh_installexamples eg/*
+	dh_installchangelogs Changes
+	dh_perl
+	dh_compress
+	dh_fixperms
+	dh_installdeb
+	dh_gencontrol
+	dh_md5sums
+	dh_builddeb
+
+binary: binary-indep binary-arch
+.PHONY: build clean binary-indep binary-arch binary install


Property changes on: trunk/packages/libbio-graphics-perl/trunk/debian/rules
___________________________________________________________________
Name: svn:executable
   + *

Added: trunk/packages/libbio-graphics-perl/trunk/debian/watch
===================================================================
--- trunk/packages/libbio-graphics-perl/trunk/debian/watch	                        (rev 0)
+++ trunk/packages/libbio-graphics-perl/trunk/debian/watch	2009-01-10 10:25:06 UTC (rev 2944)
@@ -0,0 +1,4 @@
+# format version number, currently 3; this line is compulsory!
+version=3
+# URL to the package page followed by a regex to search
+http://search.cpan.org/dist/Bio-Graphics/   .*/Bio-Graphics-v?(\d[\d_.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz|zip)$

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