[med-svn] r2991 - trunk/packages/bioperl/trunk/debian

[plessy at alioth.debian.org]

Author: plessy
Date: 2009-01-15 10:28:42 +0000 (Thu, 15 Jan 2009)
New Revision: 2991

Modified:
   trunk/packages/bioperl/trunk/debian/control
Log:
Beginning to reorganise the dependancies.


Modified: trunk/packages/bioperl/trunk/debian/control
===================================================================
--- trunk/packages/bioperl/trunk/debian/control	2009-01-15 10:16:30 UTC (rev 2990)
+++ trunk/packages/bioperl/trunk/debian/control	2009-01-15 10:28:42 UTC (rev 2991)
@@ -12,12 +12,35 @@
  libtest-harness-perl (>= 2.62),
  libio-string-perl,
  libdata-stag-perl,
+# Recommended in Build.PL (we want them to run the tests)
+ libace-perl,
+ libalgorithm-munkres-perl,
+ libarray-compare-perl,
+ libbio-asn1-entrezgene-perl,
+ libclone-perl,
+ libconvert-binary-c-perl,
+ libgraph-perl,
+ libgraphviz-perl,
+ libhtml-entities-perl,
+ libhtml-parser-perl,
+ libhttp-request-common-perl,
+ liblwp-useragent-perl,
  libmath-random-perl,
- libace-perl,
+ libpostcript-textblock-perl,
+ libset-scalar-perl,
+ libsoap-lite-perl,
+ libspreadsheet-parseexcel-perl,
+ libstorable-perl,
  libsvg-graph-perl,
- libbio-asn1-entrezgene-perl,
- libgraphviz-perl
-# Text::Parsewords is provided by Perl 5.10.
+# libtext-parsewords-perl, # provided by Perl 5.10
+ liburi-escape-perl,
+ libxml-dom-xpath-perl,
+ libxml-parser-perl,
+ libxml-parser-perlsax-perl,
+ libxml-sax-perl,
+ libxml-sax-writer-perl,
+ libxml-twix-perl,
+ libxml-writer-perl
 Standards-Version: 3.8.0
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bioperl/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/bioperl/trunk/
@@ -30,41 +53,46 @@
  libwww-perl,
  liburi-perl,
  libxml-writer-perl
-Suggests: libace-perl,
+Suggests:
+# Recommended in Build.PL (we want them to run the tests)
+ libace-perl,
+ libalgorithm-munkres-perl,
+ libarray-compare-perl,
  libbio-asn1-entrezgene-perl,
- libclass-autoclass-perl,
  libclone-perl,
  libconvert-binary-c-perl,
- libdata-stag-xmlwriter-perl,
- libgd-gd2-perl,
  libgraph-perl,
+ libgraphviz-perl,
+ libhtml-entities-perl,
  libhtml-parser-perl,
- libpostscript-perl,
+ libhttp-request-common-perl,
+ liblwp-useragent-perl,
+ libmath-random-perl,
+ libpostcript-textblock-perl,
  libset-scalar-perl,
  libsoap-lite-perl,
  libspreadsheet-parseexcel-perl,
- libsvg-perl,
+ libstorable-perl,
  libsvg-graph-perl,
- libtext-shellwords-perl,
+# provided by Perl 5.10 ?
+ libtext-parsewords-perl,
+ liburi-escape-perl,
+ libxml-dom-xpath-perl,
  libxml-parser-perl,
- libxml-perl,
+ libxml-parser-perlsax-perl,
  libxml-sax-perl,
  libxml-sax-writer-perl,
- libxml-twig-perl,
- libdbd-mysql-perl,
- blast2,
- clustalw,
- emboss,
- primer3,
- repeatmasker,
- glimmer,
- hmmer,
- molphy,
- phylip,
- sim4 | sibsim4,
- wise,
- exonerate,
- spidey 
+ libxml-twix-perl,
+ libxml-writer-perl
+# old, still needed ?
+# libclass-autoclass-perl,
+# libdata-stag-xmlwriter-perl,
+# libgd-gd2-perl,
+# libpostscript-perl,
+# libset-scalar-perl,
+# libsvg-perl,
+# libtext-shellwords-perl,
+# libdbd-mysql-perl,
 Description: Perl tools for computational molecular biology
  The Bioperl project is a coordinated effort to collect computational methods
  routinely used in bioinformatics into a set of standard CPAN-style,