[med-svn] r4403 - in trunk/packages/mcl/trunk/debian: . patches
Philipp Benner
philipp at alioth.debian.org
Tue Nov 24 21:15:04 UTC 2009
Author: philipp
Date: 2009-11-24 21:15:04 +0000 (Tue, 24 Nov 2009)
New Revision: 4403
Modified:
trunk/packages/mcl/trunk/debian/changelog
trunk/packages/mcl/trunk/debian/control
trunk/packages/mcl/trunk/debian/patches/01-manpage-errors.patch
Log:
new upstream release
Modified: trunk/packages/mcl/trunk/debian/changelog
===================================================================
--- trunk/packages/mcl/trunk/debian/changelog 2009-11-24 20:39:33 UTC (rev 4402)
+++ trunk/packages/mcl/trunk/debian/changelog 2009-11-24 21:15:04 UTC (rev 4403)
@@ -1,3 +1,10 @@
+mcl (1:09-308-1) unstable; urgency=low
+
+ * New upstream release
+ * Moved repository to debian-med
+
+ -- Philipp Benner <philipp at debian.org> Tue, 24 Nov 2009 20:43:56 +0000
+
mcl (1:09-261-1) unstable; urgency=low
* New upstream release
Modified: trunk/packages/mcl/trunk/debian/control
===================================================================
--- trunk/packages/mcl/trunk/debian/control 2009-11-24 20:39:33 UTC (rev 4402)
+++ trunk/packages/mcl/trunk/debian/control 2009-11-24 21:15:04 UTC (rev 4403)
@@ -1,11 +1,12 @@
Source: mcl
Section: math
Priority: optional
-Maintainer: Philipp Benner <philipp at debian.org>
+Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Philipp Benner <philipp at debian.org>
Build-Depends: debhelper (>= 5), autotools-dev, quilt, zoem, tidy
Standards-Version: 3.8.3
-Vcs-Browser: http://svn.debian.org/wsvn/pkg-escience/mcl/
-Vcs-Svn: svn://svn.debian.org/pkg-escience/mcl/
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/mcl/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/mcl/
Homepage: http://micans.org/mcl/
Package: mcl
Modified: trunk/packages/mcl/trunk/debian/patches/01-manpage-errors.patch
===================================================================
--- trunk/packages/mcl/trunk/debian/patches/01-manpage-errors.patch 2009-11-24 20:39:33 UTC (rev 4402)
+++ trunk/packages/mcl/trunk/debian/patches/01-manpage-errors.patch 2009-11-24 21:15:04 UTC (rev 4403)
@@ -1,11 +1,11 @@
-Index: mcl-09-261/doc/clmclose.1
+Index: mcl-09-308/doc/clmclose.1
===================================================================
---- mcl-09-261.orig/doc/clmclose.1 2009-06-28 14:18:27.000000000 +0000
-+++ mcl-09-261/doc/clmclose.1 2009-06-28 14:19:28.000000000 +0000
+--- mcl-09-308.orig/doc/clmclose.1 2009-06-28 14:18:27.000000000 +0000
++++ mcl-09-308/doc/clmclose.1 2009-06-28 14:19:28.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm close" 1 "18 Sep 2009" "clm close 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmclose" 1 "18 Sep 2009" "clm close 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm close" 1 "4 Nov 2009" "clm close 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmclose" 1 "4 Nov 2009" "clm close 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -18,14 +18,14 @@
clmclose is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clmdist.1
+Index: mcl-09-308/doc/clmdist.1
===================================================================
---- mcl-09-261.orig/doc/clmdist.1 2009-06-28 14:18:40.000000000 +0000
-+++ mcl-09-261/doc/clmdist.1 2009-06-28 14:19:45.000000000 +0000
+--- mcl-09-308.orig/doc/clmdist.1 2009-06-28 14:18:40.000000000 +0000
++++ mcl-09-308/doc/clmdist.1 2009-06-28 14:19:45.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm dist" 1 "18 Sep 2009" "clm dist 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmdist" 1 "18 Sep 2009" "clm dist 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm dist" 1 "4 Nov 2009" "clm dist 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmdist" 1 "4 Nov 2009" "clm dist 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -38,10 +38,10 @@
The distance that is computed can be any of
\fIsplit/join distance\fP, \fIvariance of information\fP,
-Index: mcl-09-261/doc/clmformat.1
+Index: mcl-09-308/doc/clmformat.1
===================================================================
---- mcl-09-261.orig/doc/clmformat.1 2009-06-28 14:18:48.000000000 +0000
-+++ mcl-09-261/doc/clmformat.1 2009-06-28 14:19:22.000000000 +0000
+--- mcl-09-308.orig/doc/clmformat.1 2009-06-28 14:18:48.000000000 +0000
++++ mcl-09-308/doc/clmformat.1 2009-06-28 14:19:22.000000000 +0000
@@ -28,7 +28,7 @@
.el .in 8m
..
@@ -51,14 +51,14 @@
(optionally with labels and/or cohesion and stickiness measures
attached)\&.
-Index: mcl-09-261/doc/clmimac.1
+Index: mcl-09-308/doc/clmimac.1
===================================================================
---- mcl-09-261.orig/doc/clmimac.1 2009-06-28 14:19:53.000000000 +0000
-+++ mcl-09-261/doc/clmimac.1 2009-06-28 14:19:59.000000000 +0000
+--- mcl-09-308.orig/doc/clmimac.1 2009-06-28 14:19:53.000000000 +0000
++++ mcl-09-308/doc/clmimac.1 2009-06-28 14:19:59.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm imac" 1 "18 Sep 2009" "clm imac 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmimac" 1 "18 Sep 2009" "clm imac 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm imac" 1 "4 Nov 2009" "clm imac 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmimac" 1 "4 Nov 2009" "clm imac 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -71,14 +71,14 @@
clmimac is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clminfo.1
+Index: mcl-09-308/doc/clminfo.1
===================================================================
---- mcl-09-261.orig/doc/clminfo.1 2009-06-28 14:20:06.000000000 +0000
-+++ mcl-09-261/doc/clminfo.1 2009-06-28 14:20:11.000000000 +0000
+--- mcl-09-308.orig/doc/clminfo.1 2009-06-28 14:20:06.000000000 +0000
++++ mcl-09-308/doc/clminfo.1 2009-06-28 14:20:11.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm info" 1 "18 Sep 2009" "clm info 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clminfo" 1 "18 Sep 2009" "clm info 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm info" 1 "4 Nov 2009" "clm info 1\&.008, 09-308" "USER COMMANDS "
++.TH "clminfo" 1 "4 Nov 2009" "clm info 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -86,19 +86,19 @@
.el .in 8m
..
.SH NAME
--clm info \- Compute performance measures for graphs and clusterings\&.
-+clminfo \- Compute performance measures for graphs and clusterings\&.
+-clm info \- compute performance measures for graphs and clusterings\&.
++clminfo \- compute performance measures for graphs and clusterings\&.
clminfo is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clmmate.1
+Index: mcl-09-308/doc/clmmate.1
===================================================================
---- mcl-09-261.orig/doc/clmmate.1 2009-06-28 14:20:17.000000000 +0000
-+++ mcl-09-261/doc/clmmate.1 2009-06-28 14:20:24.000000000 +0000
+--- mcl-09-308.orig/doc/clmmate.1 2009-06-28 14:20:17.000000000 +0000
++++ mcl-09-308/doc/clmmate.1 2009-06-28 14:20:24.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm mate" 1 "18 Sep 2009" "clm mate 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmmate" 1 "18 Sep 2009" "clm mate 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm mate" 1 "4 Nov 2009" "clm mate 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmmate" 1 "4 Nov 2009" "clm mate 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -111,14 +111,14 @@
clmmate is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clmmeet.1
+Index: mcl-09-308/doc/clmmeet.1
===================================================================
---- mcl-09-261.orig/doc/clmmeet.1 2009-06-28 14:20:31.000000000 +0000
-+++ mcl-09-261/doc/clmmeet.1 2009-06-28 14:20:36.000000000 +0000
+--- mcl-09-308.orig/doc/clmmeet.1 2009-06-28 14:20:31.000000000 +0000
++++ mcl-09-308/doc/clmmeet.1 2009-06-28 14:20:36.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm meet" 1 "18 Sep 2009" "clm meet 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmmeet" 1 "18 Sep 2009" "clm meet 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm meet" 1 "4 Nov 2009" "clm meet 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmmeet" 1 "4 Nov 2009" "clm meet 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -131,14 +131,14 @@
clmmeet is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clmorder.1
+Index: mcl-09-308/doc/clmorder.1
===================================================================
---- mcl-09-261.orig/doc/clmorder.1 2009-06-28 14:20:41.000000000 +0000
-+++ mcl-09-261/doc/clmorder.1 2009-06-28 14:20:46.000000000 +0000
+--- mcl-09-308.orig/doc/clmorder.1 2009-06-28 14:20:41.000000000 +0000
++++ mcl-09-308/doc/clmorder.1 2009-06-28 14:20:46.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm order" 1 "18 Sep 2009" "clm order 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmorder" 1 "18 Sep 2009" "clm order 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm order" 1 "4 Nov 2009" "clm order 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmorder" 1 "4 Nov 2009" "clm order 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -146,19 +146,19 @@
.el .in 8m
..
.SH NAME
--clm order \- reorder indices to represent blocks from different clusterings\&.
-+clmorder \- reorder indices to represent blocks from different clusterings\&.
+-clm order \- reorder clusterings conformal to inclusion structure
++clmorder \- reorder clusterings conformal to inclusion structure
clmorder is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clmresidue.1
+Index: mcl-09-308/doc/clmresidue.1
===================================================================
---- mcl-09-261.orig/doc/clmresidue.1 2009-06-28 14:20:51.000000000 +0000
-+++ mcl-09-261/doc/clmresidue.1 2009-06-28 14:20:57.000000000 +0000
+--- mcl-09-308.orig/doc/clmresidue.1 2009-06-28 14:20:51.000000000 +0000
++++ mcl-09-308/doc/clmresidue.1 2009-06-28 14:20:57.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm residue" 1 "18 Sep 2009" "clm residue 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmresidue" 1 "18 Sep 2009" "clm residue 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm residue" 1 "4 Nov 2009" "clm residue 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmresidue" 1 "4 Nov 2009" "clm residue 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -171,14 +171,14 @@
clmresidue is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/clmvol.1
+Index: mcl-09-308/doc/clmvol.1
===================================================================
---- mcl-09-261.orig/doc/clmvol.1 2009-06-28 14:21:02.000000000 +0000
-+++ mcl-09-261/doc/clmvol.1 2009-06-28 14:21:07.000000000 +0000
+--- mcl-09-308.orig/doc/clmvol.1 2009-06-28 14:21:02.000000000 +0000
++++ mcl-09-308/doc/clmvol.1 2009-06-28 14:21:07.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "clm vol" 1 "18 Sep 2009" "clm vol 1\&.008, 09-261" "USER COMMANDS "
-+.TH "clmvol" 1 "18 Sep 2009" "clm vol 1\&.008, 09-261" "USER COMMANDS "
+-.TH "clm vol" 1 "4 Nov 2009" "clm vol 1\&.008, 09-308" "USER COMMANDS "
++.TH "clmvol" 1 "4 Nov 2009" "clm vol 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -191,14 +191,14 @@
clmvol is not in actual fact a program\&. This manual
page documents the behaviour and options of the clm program when
-Index: mcl-09-261/doc/mcxclcf.1
+Index: mcl-09-308/doc/mcxclcf.1
===================================================================
---- mcl-09-261.orig/doc/mcxclcf.1 2009-06-28 14:21:17.000000000 +0000
-+++ mcl-09-261/doc/mcxclcf.1 2009-06-28 14:21:22.000000000 +0000
+--- mcl-09-308.orig/doc/mcxclcf.1 2009-06-28 14:21:17.000000000 +0000
++++ mcl-09-308/doc/mcxclcf.1 2009-06-28 14:21:22.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "mcx clcf" 1 "18 Sep 2009" "mcx clcf 1\&.008, 09-261" "USER COMMANDS "
-+.TH "mcxclcf" 1 "18 Sep 2009" "mcx clcf 1\&.008, 09-261" "USER COMMANDS "
+-.TH "mcx clcf" 1 "4 Nov 2009" "mcx clcf 1\&.008, 09-308" "USER COMMANDS "
++.TH "mcxclcf" 1 "4 Nov 2009" "mcx clcf 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -211,14 +211,14 @@
.SH SYNOPSIS
\fBmcx clcf\fP [options] [matrix-file]
-Index: mcl-09-261/doc/mcxconvert.1
+Index: mcl-09-308/doc/mcxconvert.1
===================================================================
---- mcl-09-261.orig/doc/mcxconvert.1 2009-06-28 14:21:30.000000000 +0000
-+++ mcl-09-261/doc/mcxconvert.1 2009-06-28 14:21:37.000000000 +0000
+--- mcl-09-308.orig/doc/mcxconvert.1 2009-06-28 14:21:30.000000000 +0000
++++ mcl-09-308/doc/mcxconvert.1 2009-06-28 14:21:37.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "mcx convert" 1 "18 Sep 2009" "mcx convert 1\&.008, 09-261" "USER COMMANDS "
-+.TH "mcxconvert" 1 "18 Sep 2009" "mcx convert 1\&.008, 09-261" "USER COMMANDS "
+-.TH "mcx convert" 1 "4 Nov 2009" "mcx convert 1\&.008, 09-308" "USER COMMANDS "
++.TH "mcxconvert" 1 "4 Nov 2009" "mcx convert 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -231,14 +231,14 @@
.SH SYNOPSIS
\fBmcx convert\fP <matrix-file-in> <matrix-file-out>
-Index: mcl-09-261/doc/mcxctty.1
+Index: mcl-09-308/doc/mcxctty.1
===================================================================
---- mcl-09-261.orig/doc/mcxctty.1 2009-06-28 14:21:49.000000000 +0000
-+++ mcl-09-261/doc/mcxctty.1 2009-06-28 14:21:53.000000000 +0000
+--- mcl-09-308.orig/doc/mcxctty.1 2009-06-28 14:21:49.000000000 +0000
++++ mcl-09-308/doc/mcxctty.1 2009-06-28 14:21:53.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "mcx ctty" 1 "18 Sep 2009" "mcx ctty 1\&.008, 09-261" "USER COMMANDS "
-+.TH "mcxctty" 1 "18 Sep 2009" "mcx ctty 1\&.008, 09-261" "USER COMMANDS "
+-.TH "mcx ctty" 1 "4 Nov 2009" "mcx ctty 1\&.008, 09-308" "USER COMMANDS "
++.TH "mcxctty" 1 "4 Nov 2009" "mcx ctty 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
@@ -251,14 +251,14 @@
.SH SYNOPSIS
\fBmcx ctty\fP [options] [matrix-file]
-Index: mcl-09-261/doc/mcxdiameter.1
+Index: mcl-09-308/doc/mcxdiameter.1
===================================================================
---- mcl-09-261.orig/doc/mcxdiameter.1 2009-06-28 14:21:59.000000000 +0000
-+++ mcl-09-261/doc/mcxdiameter.1 2009-06-28 14:22:04.000000000 +0000
+--- mcl-09-308.orig/doc/mcxdiameter.1 2009-06-28 14:21:59.000000000 +0000
++++ mcl-09-308/doc/mcxdiameter.1 2009-06-28 14:22:04.000000000 +0000
@@ -1,5 +1,5 @@
.\" Copyright (c) 2009 Stijn van Dongen
--.TH "mcx diameter" 1 "18 Sep 2009" "mcx diameter 1\&.008, 09-261" "USER COMMANDS "
-+.TH "mcxdiameter" 1 "18 Sep 2009" "mcx diameter 1\&.008, 09-261" "USER COMMANDS "
+-.TH "mcx diameter" 1 "4 Nov 2009" "mcx diameter 1\&.008, 09-308" "USER COMMANDS "
++.TH "mcxdiameter" 1 "4 Nov 2009" "mcx diameter 1\&.008, 09-308" "USER COMMANDS "
.po 2m
.de ZI
.\" Zoem Indent/Itemize macro I.
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