[med-svn] r4221 - trunk/packages/bwa/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2009-10-19 05:13:55 +0000 (Mon, 19 Oct 2009)
New Revision: 4221

Modified:
   trunk/packages/bwa/trunk/debian/changelog
   trunk/packages/bwa/trunk/debian/control
   trunk/packages/bwa/trunk/debian/copyright
Log:
New upstream release.


Modified: trunk/packages/bwa/trunk/debian/changelog
===================================================================
--- trunk/packages/bwa/trunk/debian/changelog	2009-10-19 04:38:21 UTC (rev 4220)
+++ trunk/packages/bwa/trunk/debian/changelog	2009-10-19 05:13:55 UTC (rev 4221)
@@ -1,3 +1,12 @@
+bwa (0.5.4-1) unstable; urgency=low
+
+  * New upstream release, see ‘/usr/share/doc/bwa/NEWS.gz’.
+  * Refreshed debian/copyright.
+  * Reflected the rename of dBWT-Sw to BWA-SW in the package's description
+    (debian/control).
+
+ -- Charles Plessy <plessy at debian.org>  Mon, 19 Oct 2009 13:59:42 +0900
+
 bwa (0.5.3-1) unstable; urgency=low
 
   * Initial release (Closes: #548719)

Modified: trunk/packages/bwa/trunk/debian/control
===================================================================
--- trunk/packages/bwa/trunk/debian/control	2009-10-19 04:38:21 UTC (rev 4220)
+++ trunk/packages/bwa/trunk/debian/control	2009-10-19 05:13:55 UTC (rev 4221)
@@ -17,7 +17,7 @@
 Description: Burrows-Wheeler Aligner
  Burrows-Wheeler Aligner (BWA) is a program that aligns relatively short
  nucleotide sequences against a long reference sequence such as the human
- genome. It implements two algorithms, bwa-short and dBWT-SW. The former works
+ genome. It implements two algorithms, bwa-short and BWA-SW. The former works
  for query sequences shorter than 200 bp and the latter for longer sequences up
  to around 100 kbp. Both algorithms do gapped alignment. They are usually more
  accurate and faster on queries with low error rates.

Modified: trunk/packages/bwa/trunk/debian/copyright
===================================================================
--- trunk/packages/bwa/trunk/debian/copyright	2009-10-19 04:38:21 UTC (rev 4220)
+++ trunk/packages/bwa/trunk/debian/copyright	2009-10-19 05:13:55 UTC (rev 4221)
@@ -1,11 +1,11 @@
 Name      :  Burrows-Wheeler Aligner
 Contact   :  bio-bwa-help at lists.sourceforge.net
-Source    :  http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.3.tar.bz2
+Source    :  http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.4.tar.bz2
 
 Copyright :  © 2008 Genome Research Ltd (GRL)
              2008, by Heng Li <lh3 at sanger.ac.uk>
              © 2003-2006, 2008, 2009, by Heng Li <lh3lh3 at gmail.com>
-             © 2008, by Attractive Chaos <attractivechaos at aol.co.uk>
+             © 2008, 2009 by attractor <attractor at live.co.uk>
              © 2008 Yuta Mori
 License   :  MIT