[med-svn] r3920 - trunk/packages/arb/trunk/debian

[Andreas Tille]

Author: tille
Date: 2009-09-08 06:53:34 +0000 (Tue, 08 Sep 2009)
New Revision: 3920

Modified:
   trunk/packages/arb/trunk/debian/arb-common.install
   trunk/packages/arb/trunk/debian/arb-doc.install
   trunk/packages/arb/trunk/debian/changelog
   trunk/packages/arb/trunk/debian/control
   trunk/packages/arb/trunk/debian/rules
Log:
Recommends bioperl; cleanup regarding several changes in new upstream version


Modified: trunk/packages/arb/trunk/debian/arb-common.install
===================================================================
--- trunk/packages/arb/trunk/debian/arb-common.install	2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/arb-common.install	2009-09-08 06:53:34 UTC (rev 3920)
@@ -4,7 +4,6 @@
 SH                                    usr/lib/arb
 HELP_SOURCE/oldhelp/*.hlp             usr/lib/arb/HELP_SOURCE/oldhelp
 HELP_SOURCE/oldhelp/prompt            usr/lib/arb/HELP_SOURCE/oldhelp
-HELP_SOURCE/oldhelp/seer              usr/lib/arb/HELP_SOURCE/oldhelp
 lib/[d-gi-kmoqt-z]*                   usr/lib/arb/lib
 lib/pi*                               usr/share/arb/lib
 lib/rna3d                             usr/share/arb/lib

Modified: trunk/packages/arb/trunk/debian/arb-doc.install
===================================================================
--- trunk/packages/arb/trunk/debian/arb-doc.install	2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/arb-doc.install	2009-09-08 06:53:34 UTC (rev 3920)
@@ -1,2 +1,2 @@
-lib/help_html/*               usr/share/doc/arb/html
-HELP_SOURCE/oldhelp/arb.ps.gz usr/share/doc/arb/help
+lib/help_html/*                usr/share/doc/arb/html
+HELP_SOURCE/oldhelp/arb.pdf.gz usr/share/doc/arb/help

Modified: trunk/packages/arb/trunk/debian/changelog
===================================================================
--- trunk/packages/arb/trunk/debian/changelog	2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/changelog	2009-09-08 06:53:34 UTC (rev 3920)
@@ -3,15 +3,18 @@
   [ Andreas Tille ]
   * New upstream version
     Closes: #522021
-  * Package arb-doc in non-free/doc
-  * Standards-Version: 3.8.3 (Added README.source)
-  * Build-Depends: dpkg-dev (>= 1.15.4) to make use of
-    `dpkg-architecture -qDEB_BUILD_ARCH_BITS` in Makefile
+  * debian/control:
+    - Package arb-doc in non-free/doc
+    - Standards-Version: 3.8.3 (Added README.source)
+    - Build-Depends: dpkg-dev (>= 1.15.4) to make use of
+      `dpkg-architecture -qDEB_BUILD_ARCH_BITS` in Makefile
+    - Build-Depends: xutils-dev
+    - debian/control: arb Recommends: bioperl
   * Removed / changed patches which were applied upstream
     - debian/patches/ARB_release200712_gcc4.3.1.patch removed
     - debian/patches/20_replace_rxp_by_xmllint.patch removed
     - debian/patches/tmpfile_CVE-2008-5378.patch removed applied part
-  * Build-Depends: xutils-dev
+  * debian/{rules,*.install}: Cleanup regarding changes in new upstream version
 
   [ David Paleino ]
   * Removed myself from Uploaders

Modified: trunk/packages/arb/trunk/debian/control
===================================================================
--- trunk/packages/arb/trunk/debian/control	2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/control	2009-09-08 06:53:34 UTC (rev 3920)
@@ -19,7 +19,7 @@
 Depends: ${shlibs:Depends}, libarb (= ${binary:Version}), arb-common (= ${source:Version}),
  phylip (>= 3.6b), fastdnaml (>= 1.2.2-4), readseq (>= 1-1), tree-puzzle (>=5.0-3), molphy,
  ssh, transfig, ${misc:Depends}
-Recommends: xfig
+Recommends: xfig, bioperl
 Suggests: arb-database, gnuplot, gv
 Description: Integrated package for sequence database handling and analysis
  The ARB software is a graphically oriented package comprising various tools

Modified: trunk/packages/arb/trunk/debian/rules
===================================================================
--- trunk/packages/arb/trunk/debian/rules	2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/rules	2009-09-08 06:53:34 UTC (rev 3920)
@@ -98,10 +98,7 @@
 
 	# Fix permissions
 	chmod 755 debian/arb-common/usr/lib/arb/SH/*
-	chmod 755 debian/arb-common/usr/lib/arb/PERL_SCRIPTS/IFTHELP/*
 	chmod 644 debian/arb-common/usr/lib/arb/lib/pixmaps/*.xpm
-	# Remove thumbnail dir
-	rm -rf debian/arb-common/usr/lib/arb/lib/pixmaps/.xvpics
 
 # Build architecture-independent files here.
 binary-indep: build install