[med-svn] r3920 - trunk/packages/arb/trunk/debian
Andreas Tille
tille at alioth.debian.org
Tue Sep 8 06:53:35 UTC 2009
Author: tille
Date: 2009-09-08 06:53:34 +0000 (Tue, 08 Sep 2009)
New Revision: 3920
Modified:
trunk/packages/arb/trunk/debian/arb-common.install
trunk/packages/arb/trunk/debian/arb-doc.install
trunk/packages/arb/trunk/debian/changelog
trunk/packages/arb/trunk/debian/control
trunk/packages/arb/trunk/debian/rules
Log:
Recommends bioperl; cleanup regarding several changes in new upstream version
Modified: trunk/packages/arb/trunk/debian/arb-common.install
===================================================================
--- trunk/packages/arb/trunk/debian/arb-common.install 2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/arb-common.install 2009-09-08 06:53:34 UTC (rev 3920)
@@ -4,7 +4,6 @@
SH usr/lib/arb
HELP_SOURCE/oldhelp/*.hlp usr/lib/arb/HELP_SOURCE/oldhelp
HELP_SOURCE/oldhelp/prompt usr/lib/arb/HELP_SOURCE/oldhelp
-HELP_SOURCE/oldhelp/seer usr/lib/arb/HELP_SOURCE/oldhelp
lib/[d-gi-kmoqt-z]* usr/lib/arb/lib
lib/pi* usr/share/arb/lib
lib/rna3d usr/share/arb/lib
Modified: trunk/packages/arb/trunk/debian/arb-doc.install
===================================================================
--- trunk/packages/arb/trunk/debian/arb-doc.install 2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/arb-doc.install 2009-09-08 06:53:34 UTC (rev 3920)
@@ -1,2 +1,2 @@
-lib/help_html/* usr/share/doc/arb/html
-HELP_SOURCE/oldhelp/arb.ps.gz usr/share/doc/arb/help
+lib/help_html/* usr/share/doc/arb/html
+HELP_SOURCE/oldhelp/arb.pdf.gz usr/share/doc/arb/help
Modified: trunk/packages/arb/trunk/debian/changelog
===================================================================
--- trunk/packages/arb/trunk/debian/changelog 2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/changelog 2009-09-08 06:53:34 UTC (rev 3920)
@@ -3,15 +3,18 @@
[ Andreas Tille ]
* New upstream version
Closes: #522021
- * Package arb-doc in non-free/doc
- * Standards-Version: 3.8.3 (Added README.source)
- * Build-Depends: dpkg-dev (>= 1.15.4) to make use of
- `dpkg-architecture -qDEB_BUILD_ARCH_BITS` in Makefile
+ * debian/control:
+ - Package arb-doc in non-free/doc
+ - Standards-Version: 3.8.3 (Added README.source)
+ - Build-Depends: dpkg-dev (>= 1.15.4) to make use of
+ `dpkg-architecture -qDEB_BUILD_ARCH_BITS` in Makefile
+ - Build-Depends: xutils-dev
+ - debian/control: arb Recommends: bioperl
* Removed / changed patches which were applied upstream
- debian/patches/ARB_release200712_gcc4.3.1.patch removed
- debian/patches/20_replace_rxp_by_xmllint.patch removed
- debian/patches/tmpfile_CVE-2008-5378.patch removed applied part
- * Build-Depends: xutils-dev
+ * debian/{rules,*.install}: Cleanup regarding changes in new upstream version
[ David Paleino ]
* Removed myself from Uploaders
Modified: trunk/packages/arb/trunk/debian/control
===================================================================
--- trunk/packages/arb/trunk/debian/control 2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/control 2009-09-08 06:53:34 UTC (rev 3920)
@@ -19,7 +19,7 @@
Depends: ${shlibs:Depends}, libarb (= ${binary:Version}), arb-common (= ${source:Version}),
phylip (>= 3.6b), fastdnaml (>= 1.2.2-4), readseq (>= 1-1), tree-puzzle (>=5.0-3), molphy,
ssh, transfig, ${misc:Depends}
-Recommends: xfig
+Recommends: xfig, bioperl
Suggests: arb-database, gnuplot, gv
Description: Integrated package for sequence database handling and analysis
The ARB software is a graphically oriented package comprising various tools
Modified: trunk/packages/arb/trunk/debian/rules
===================================================================
--- trunk/packages/arb/trunk/debian/rules 2009-09-08 06:39:59 UTC (rev 3919)
+++ trunk/packages/arb/trunk/debian/rules 2009-09-08 06:53:34 UTC (rev 3920)
@@ -98,10 +98,7 @@
# Fix permissions
chmod 755 debian/arb-common/usr/lib/arb/SH/*
- chmod 755 debian/arb-common/usr/lib/arb/PERL_SCRIPTS/IFTHELP/*
chmod 644 debian/arb-common/usr/lib/arb/lib/pixmaps/*.xpm
- # Remove thumbnail dir
- rm -rf debian/arb-common/usr/lib/arb/lib/pixmaps/.xvpics
# Build architecture-independent files here.
binary-indep: build install
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