[med-svn] r4027 - trunk/packages/infernal/trunk/debian

[Andreas Tille]

Author: tille
Date: 2009-09-25 20:54:57 +0000 (Fri, 25 Sep 2009)
New Revision: 4027

Added:
   trunk/packages/infernal/trunk/debian/infernal.dirs
   trunk/packages/infernal/trunk/debian/infernal.docs
Removed:
   trunk/packages/infernal/trunk/debian/README.Debian.source
   trunk/packages/infernal/trunk/debian/dirs
   trunk/packages/infernal/trunk/debian/docs
Modified:
   trunk/packages/infernal/trunk/debian/README.Debian
Log:
First shot at the new upstream version


Modified: trunk/packages/infernal/trunk/debian/README.Debian
===================================================================
--- trunk/packages/infernal/trunk/debian/README.Debian	2009-09-25 19:28:47 UTC (rev 4026)
+++ trunk/packages/infernal/trunk/debian/README.Debian	2009-09-25 20:54:57 UTC (rev 4027)
@@ -1,11 +1,6 @@
 infernal for Debian
 -------------------
 
-The source of the user guide (downloadable at
-ftp://infernal.janelia.org/pub/software/infernal/Userguide.pdf) is
-apparently not distributed with the source of the program. It was hence
-removed from the source distribution.
-
 The documentation for easel contains many PDFs that are not buildable
 from source - although Debian most likely provide the tools at least to
 prepare some of the figures, e.g., a sequence alignment.  Other figures

Deleted: trunk/packages/infernal/trunk/debian/README.Debian.source
===================================================================
--- trunk/packages/infernal/trunk/debian/README.Debian.source	2009-09-25 19:28:47 UTC (rev 4026)
+++ trunk/packages/infernal/trunk/debian/README.Debian.source	2009-09-25 20:54:57 UTC (rev 4027)
@@ -1,20 +0,0 @@
-infernal - Changes to upstream source distribution
-==================================================
-
-Upstream provides the userguide.pdf as part of its source
-but does not give the material to rebuild it. Also the
-documentation of easel has many eps or pdf formatted figures
-that cannot be created from the source presented. Some
-argue that the PDFs _are_ the source, but, indeed at least
-some figures like the sequence alignments could be prepared
-with the infrastructure that Debian provides and thus do not
-need to be shipped with the source. Avoiding these files
-reduced the load on the source .tar.gz by around 2 MB.
-
-As an interim solution all the files that may be considered
-problematic are not part of the source distribution.
-
-The redundancy of the squid folder with the Debian package
-biosquid needs to remain until upstream resolves the conflicts.
-
--- Steffen Moeller   Sun, 20 Jan 2008 23:05:22 +0100

Deleted: trunk/packages/infernal/trunk/debian/dirs
===================================================================
--- trunk/packages/infernal/trunk/debian/dirs	2009-09-25 19:28:47 UTC (rev 4026)
+++ trunk/packages/infernal/trunk/debian/dirs	2009-09-25 20:54:57 UTC (rev 4027)
@@ -1 +0,0 @@
-usr/bin

Deleted: trunk/packages/infernal/trunk/debian/docs
===================================================================
--- trunk/packages/infernal/trunk/debian/docs	2009-09-25 19:28:47 UTC (rev 4026)
+++ trunk/packages/infernal/trunk/debian/docs	2009-09-25 20:54:57 UTC (rev 4027)
@@ -1,3 +0,0 @@
-00README
-00README-MPI
-SUBPACKAGES

Copied: trunk/packages/infernal/trunk/debian/infernal.dirs (from rev 4025, trunk/packages/infernal/trunk/debian/dirs)
===================================================================
--- trunk/packages/infernal/trunk/debian/infernal.dirs	                        (rev 0)
+++ trunk/packages/infernal/trunk/debian/infernal.dirs	2009-09-25 20:54:57 UTC (rev 4027)
@@ -0,0 +1 @@
+usr/bin

Copied: trunk/packages/infernal/trunk/debian/infernal.docs (from rev 4025, trunk/packages/infernal/trunk/debian/docs)
===================================================================
--- trunk/packages/infernal/trunk/debian/infernal.docs	                        (rev 0)
+++ trunk/packages/infernal/trunk/debian/infernal.docs	2009-09-25 20:54:57 UTC (rev 4027)
@@ -0,0 +1,3 @@
+00README
+00README-MPI
+documentation/release-notes/RELEASE-1.0