[med-svn] r5093 - in trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian: . patches

[Steffen Möller]

Author: moeller
Date: 2010-08-02 09:41:33 +0000 (Mon, 02 Aug 2010)
New Revision: 5093

Added:
   trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/README.source
Modified:
   trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/control
   trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/patches/allowing_happy.hbrem.patch
Log:
Series of updates to packge bagphenotype.



Added: trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/README.source
===================================================================
--- trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/README.source	                        (rev 0)
+++ trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/README.source	2010-08-02 09:41:33 UTC (rev 5093)
@@ -0,0 +1 @@
+Removed man directory from source tree - which is just non-informative.

Modified: trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/control
===================================================================
--- trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/control	2010-08-02 08:52:22 UTC (rev 5092)
+++ trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/control	2010-08-02 09:41:33 UTC (rev 5093)
@@ -11,6 +11,6 @@
 
 Package: r-other-valdar-bagphenotype.library
 Architecture: any
-Depends: ${shlibs:Depends}, r-base-core (>= 2.10.0), r-cran-g.data, happy (>= 2.3), r-cran-evd (>= 2.0), r-cran-mass
+Depends: ${shlibs:Depends}, r-base-core (>= 2.10.0), r-cran-g.data, r-other-mott-happy (>= 2.2) | r-other-mott-happy.hbrem (>= 2.2), r-cran-evd (>= 2.0), r-cran-mass
 Description: GNU R extension of the functionality of happy
  mapping QTLs in populations descended from known founders

Modified: trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/patches/allowing_happy.hbrem.patch
===================================================================
--- trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/patches/allowing_happy.hbrem.patch	2010-08-02 08:52:22 UTC (rev 5092)
+++ trunk/packages/R/r-other-valdar-bagphenotype/trunk/debian/patches/allowing_happy.hbrem.patch	2010-08-02 09:41:33 UTC (rev 5093)
@@ -1,13 +1,21 @@
 Index: bagphenotype.library/DESCRIPTION
 ===================================================================
 --- bagphenotype.library.orig/DESCRIPTION	2010-08-02 10:47:40.903238214 +0200
-+++ bagphenotype.library/DESCRIPTION	2010-08-02 10:47:49.153238121 +0200
++++ bagphenotype.library/DESCRIPTION	2010-08-02 10:48:25.411364117 +0200
 @@ -4,7 +4,7 @@
  Version: 0.22
  Date: 2010-03-02
  Author: William Valdar
 -Depends: happy (>= 2.3), g.data (>= 2.0), evd (>= 2.0), MASS
-+Depends: happy.hbrem (>= 2.3), g.data (>= 2.0), evd (>= 2.0), MASS
++Depends: happy.hbrem (>= 2.2), g.data (>= 2.0), evd (>= 2.0), MASS
  Suggests: lme4 (>= 0.999375-28), Matrix (>= 0.999375)
  Maintainer: <william_valdar at med.unc.edu>
  Description: More about what it does (maybe more than one line)
+Index: bagphenotype.library/debian/README.source
+===================================================================
+--- /dev/null	1970-01-01 00:00:00.000000000 +0000
++++ bagphenotype.library/debian/README.source	2010-08-02 11:27:55.041364186 +0200
+@@ -0,0 +1,3 @@
++The man directory was removed from the
++source tree since this was complicating
++the build and did not feature any information.