[med-svn] r5524 - in trunk/packages: . ncbi-blast-plus ncbi-blast-plus/trunk ncbi-blast-plus/trunk/debian ncbi-blast-plus/trunk/debian/patches ncbi-blast-plus/trunk/debian/source
Steffen Möller
moeller at alioth.debian.org
Thu Dec 2 17:36:35 UTC 2010
Author: moeller
Date: 2010-12-02 17:36:34 +0000 (Thu, 02 Dec 2010)
New Revision: 5524
Added:
trunk/packages/ncbi-blast-plus/
trunk/packages/ncbi-blast-plus/trunk/
trunk/packages/ncbi-blast-plus/trunk/debian/
trunk/packages/ncbi-blast-plus/trunk/debian/README.Debian
trunk/packages/ncbi-blast-plus/trunk/debian/README.source
trunk/packages/ncbi-blast-plus/trunk/debian/changelog
trunk/packages/ncbi-blast-plus/trunk/debian/compat
trunk/packages/ncbi-blast-plus/trunk/debian/control
trunk/packages/ncbi-blast-plus/trunk/debian/copyright
trunk/packages/ncbi-blast-plus/trunk/debian/docs
trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.cron.d.ex
trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.default.ex
trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.doc-base.EX
trunk/packages/ncbi-blast-plus/trunk/debian/patches/
trunk/packages/ncbi-blast-plus/trunk/debian/patches/series
trunk/packages/ncbi-blast-plus/trunk/debian/rules
trunk/packages/ncbi-blast-plus/trunk/debian/source/
trunk/packages/ncbi-blast-plus/trunk/debian/source/format
trunk/packages/ncbi-blast-plus/trunk/debian/watch.ex
Log:
Seed of a package of blast+
Added: trunk/packages/ncbi-blast-plus/trunk/debian/README.Debian
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/README.Debian (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/README.Debian 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,6 @@
+ncbi-blast-plus for Debian
+--------------------------
+
+<possible notes regarding this package - if none, delete this file>
+
+ -- Steffen Moeller <srigirish at evolbio.mpg.de> Thu, 02 Dec 2010 18:18:41 +0100
Added: trunk/packages/ncbi-blast-plus/trunk/debian/README.source
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/README.source (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/README.source 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,9 @@
+ncbi-blast-plus for Debian
+--------------------------
+
+<this file describes information about the source package, see Debian policy
+manual section 4.14. You WILL either need to modify or delete this file>
+
+
+
+
Added: trunk/packages/ncbi-blast-plus/trunk/debian/changelog
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/changelog (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/changelog 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,5 @@
+ncbi-blast-plus (2.2.24+-1) unstable; urgency=low
+
+ * Initial release (Closes: #nnnn) <nnnn is the bug number of your ITP>
+
+ -- Steffen Moeller <srigirish at evolbio.mpg.de> Thu, 02 Dec 2010 18:18:41 +0100
Added: trunk/packages/ncbi-blast-plus/trunk/debian/compat
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/compat (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/compat 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1 @@
+7
Added: trunk/packages/ncbi-blast-plus/trunk/debian/control
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/control (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/control 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,15 @@
+Source: ncbi-blast-plus
+Section: unknown
+Priority: extra
+Maintainer: Steffen Moeller <srigirish at evolbio.mpg.de>
+Build-Depends: debhelper (>= 7.0.50~)
+Standards-Version: 3.8.4
+Homepage: <insert the upstream URL, if relevant>
+#Vcs-Git: git://git.debian.org/collab-maint/ncbi-blast-plus.git
+#Vcs-Browser: http://git.debian.org/?p=collab-maint/ncbi-blast-plus.git;a=summary
+
+Package: ncbi-blast-plus
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: <insert up to 60 chars description>
+ <insert long description, indented with spaces>
Added: trunk/packages/ncbi-blast-plus/trunk/debian/copyright
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/copyright (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/copyright 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,37 @@
+This work was packaged for Debian by:
+
+ Steffen Moeller <srigirish at evolbio.mpg.de> on Thu, 02 Dec 2010 18:18:41 +0100
+
+It was downloaded from:
+
+ <url://example.com>
+
+Upstream Author(s):
+
+ <put author's name and email here>
+ <likewise for another author>
+
+Copyright:
+
+ <Copyright (C) YYYY Firstname Lastname>
+ <likewise for another author>
+
+License:
+
+ <Put the license of the package here indented by 4 spaces>
+
+The Debian packaging is:
+
+ Copyright (C) 2010 Steffen Moeller <srigirish at evolbio.mpg.de>
+
+# Please chose a license for your packaging work. If the program you package
+# uses a mainstream license, using the same license is the safest choice.
+# Please avoid to pick license terms that are more restrictive than the
+# packaged work, as it may make Debian's contributions unacceptable upstream.
+# If you just want it to be GPL version 3, leave the following lines in.
+
+and is licensed under the GPL version 3,
+see "/usr/share/common-licenses/GPL-3".
+
+# Please also look if there are files or directories which have a
+# different copyright/license attached and list them here.
Added: trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.cron.d.ex
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.cron.d.ex (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.cron.d.ex 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,4 @@
+#
+# Regular cron jobs for the ncbi-blast-plus package
+#
+0 4 * * * root [ -x /usr/bin/ncbi-blast-plus_maintenance ] && /usr/bin/ncbi-blast-plus_maintenance
Added: trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.default.ex
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.default.ex (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.default.ex 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,10 @@
+# Defaults for ncbi-blast-plus initscript
+# sourced by /etc/init.d/ncbi-blast-plus
+# installed at /etc/default/ncbi-blast-plus by the maintainer scripts
+
+#
+# This is a POSIX shell fragment
+#
+
+# Additional options that are passed to the Daemon.
+DAEMON_OPTS=""
Added: trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.doc-base.EX
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.doc-base.EX (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/ncbi-blast-plus.doc-base.EX 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,20 @@
+Document: ncbi-blast-plus
+Title: Debian ncbi-blast-plus Manual
+Author: <insert document author here>
+Abstract: This manual describes what ncbi-blast-plus is
+ and how it can be used to
+ manage online manuals on Debian systems.
+Section: unknown
+
+Format: debiandoc-sgml
+Files: /usr/share/doc/ncbi-blast-plus/ncbi-blast-plus.sgml.gz
+
+Format: postscript
+Files: /usr/share/doc/ncbi-blast-plus/ncbi-blast-plus.ps.gz
+
+Format: text
+Files: /usr/share/doc/ncbi-blast-plus/ncbi-blast-plus.text.gz
+
+Format: HTML
+Index: /usr/share/doc/ncbi-blast-plus/html/index.html
+Files: /usr/share/doc/ncbi-blast-plus/html/*.html
Added: trunk/packages/ncbi-blast-plus/trunk/debian/patches/series
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/patches/series (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/patches/series 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1 @@
+root_Makefile.patch
Added: trunk/packages/ncbi-blast-plus/trunk/debian/rules
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/rules (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/rules 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,25 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# As a special exception, when this file is copied by dh-make into a
+# dh-make output file, you may use that output file without restriction.
+# This special exception was added by Craig Small in version 0.37 of dh-make.
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+configure: configure.stamp
+configure.stamp:
+ ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include
+ touch $@
+
+build: build.stamp
+build.stamp: configure.stamp
+ $(MAKE)
+ touch $@
+
+#%:
+# dh $@
+
+.PHONY: configure
Property changes on: trunk/packages/ncbi-blast-plus/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/ncbi-blast-plus/trunk/debian/source/format
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/source/format (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/source/format 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1 @@
+3.0 (quilt)
Added: trunk/packages/ncbi-blast-plus/trunk/debian/watch.ex
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/watch.ex (rev 0)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/watch.ex 2010-12-02 17:36:34 UTC (rev 5524)
@@ -0,0 +1,23 @@
+# Example watch control file for uscan
+# Rename this file to "watch" and then you can run the "uscan" command
+# to check for upstream updates and more.
+# See uscan(1) for format
+
+# Compulsory line, this is a version 3 file
+version=3
+
+# Uncomment to examine a Webpage
+# <Webpage URL> <string match>
+#http://www.example.com/downloads.php ncbi-blast-plus-(.*)\.tar\.gz
+
+# Uncomment to examine a Webserver directory
+#http://www.example.com/pub/ncbi-blast-plus-(.*)\.tar\.gz
+
+# Uncommment to examine a FTP server
+#ftp://ftp.example.com/pub/ncbi-blast-plus-(.*)\.tar\.gz debian uupdate
+
+# Uncomment to find new files on sourceforge, for devscripts >= 2.9
+# http://sf.net/ncbi-blast-plus/ncbi-blast-plus-(.*)\.tar\.gz
+
+# Uncomment to find new files on GooglePages
+# http://example.googlepages.com/foo.html ncbi-blast-plus-(.*)\.tar\.gz
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