[med-svn] r4619 - trunk/packages/bwa/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2010-02-17 04:05:30 +0000 (Wed, 17 Feb 2010)
New Revision: 4619

Modified:
   trunk/packages/bwa/trunk/debian/changelog
   trunk/packages/bwa/trunk/debian/control
   trunk/packages/bwa/trunk/debian/copyright
   trunk/packages/bwa/trunk/debian/install
   trunk/packages/bwa/trunk/debian/upstream-metadata.yaml
Log:
New upstream release.


Modified: trunk/packages/bwa/trunk/debian/changelog
===================================================================
--- trunk/packages/bwa/trunk/debian/changelog	2010-02-14 13:03:53 UTC (rev 4618)
+++ trunk/packages/bwa/trunk/debian/changelog	2010-02-17 04:05:30 UTC (rev 4619)
@@ -1,3 +1,11 @@
+bwa (0.5.6-1) unstable; urgency=low
+
+  * New upstream release.
+  * Incremented Standards-Version to reflect conformance with
+    Policy 3.8.4 (debian/control).
+
+ -- Charles Plessy <plessy at debian.org>  Wed, 17 Feb 2010 12:48:57 +0900
+
 bwa (0.5.5-1) unstable; urgency=low
 
   * New upstream release.

Modified: trunk/packages/bwa/trunk/debian/control
===================================================================
--- trunk/packages/bwa/trunk/debian/control	2010-02-14 13:03:53 UTC (rev 4618)
+++ trunk/packages/bwa/trunk/debian/control	2010-02-17 04:05:30 UTC (rev 4619)
@@ -5,7 +5,7 @@
 DM-Upload-Allowed: yes
 Uploaders: Charles Plessy <plessy at debian.org>
 Build-Depends: cdbs, debhelper (>= 7), zlib1g-dev
-Standards-Version: 3.8.3
+Standards-Version: 3.8.4
 Homepage: http://bio-bwa.sourceforge.net/ 
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bwa/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/bwa/trunk/

Modified: trunk/packages/bwa/trunk/debian/copyright
===================================================================
--- trunk/packages/bwa/trunk/debian/copyright	2010-02-14 13:03:53 UTC (rev 4618)
+++ trunk/packages/bwa/trunk/debian/copyright	2010-02-17 04:05:30 UTC (rev 4619)
@@ -1,6 +1,6 @@
 Name      :  Burrows-Wheeler Aligner
 Contact   :  bio-bwa-help at lists.sourceforge.net
-Source    :  http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.5.tar.bz2
+Source    :  http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.6.tar.bz2
 
 Copyright :  © 2008 Genome Research Ltd (GRL)
              2008, by Heng Li <lh3 at sanger.ac.uk>

Modified: trunk/packages/bwa/trunk/debian/install
===================================================================
--- trunk/packages/bwa/trunk/debian/install	2010-02-14 13:03:53 UTC (rev 4618)
+++ trunk/packages/bwa/trunk/debian/install	2010-02-17 04:05:30 UTC (rev 4619)
@@ -1,3 +1,4 @@
 bwa	usr/bin
 # A different solid2fastq.pl script is present in the maq package.
 solid2fastq.pl	usr/share/bwa
+qualfa2fq.pl	usr/share/bwa

Modified: trunk/packages/bwa/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/bwa/trunk/debian/upstream-metadata.yaml	2010-02-14 13:03:53 UTC (rev 4618)
+++ trunk/packages/bwa/trunk/debian/upstream-metadata.yaml	2010-02-17 04:05:30 UTC (rev 4619)
@@ -1,6 +1,8 @@
 Archive: SourceForge
 DOI: 10.1093/bioinformatics/btp324
+FAQ: http://bio-bwa.sourceforge.net/
 Homepage: http://bio-bwa.sourceforge.net/
+Name: Burrows-Wheeler Aligner
 PMID: 19451168
 Reference:
  Article: HengLi07152009
@@ -13,4 +15,6 @@
  Year: 2009
  URL: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/25/14/1754
  Eprint: http://bioinformatics.oxfordjournals.org/cgi/reprint/25/14/1754.pdf
+References: http://bio-bwa.sourceforge.net/
 Repository: https://bio-bwa.svn.sourceforge.net/svnroot/bio-bwa
+Repository-Browse: http://bio-bwa.svn.sourceforge.net/viewvc/bio-bwa/