[med-svn] r4506 - trunk/packages/alien-hunter/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2010-01-03 14:37:51 +0000 (Sun, 03 Jan 2010)
New Revision: 4506

Added:
   trunk/packages/alien-hunter/trunk/debian/upstream-metadata.yaml
Modified:
   trunk/packages/alien-hunter/trunk/debian/changelog
   trunk/packages/alien-hunter/trunk/debian/control
Log:
Centralised informations in ?\226?\128?\152debian/upstream-metadata.yaml?\226?\128?\153 and updated homepage.

Modified: trunk/packages/alien-hunter/trunk/debian/changelog
===================================================================
--- trunk/packages/alien-hunter/trunk/debian/changelog	2010-01-03 14:30:01 UTC (rev 4505)
+++ trunk/packages/alien-hunter/trunk/debian/changelog	2010-01-03 14:37:51 UTC (rev 4506)
@@ -1,3 +1,12 @@
+alien-hunter (1.7-1.1) UNRELEASED; urgency=low
+
+  * Non-maintainer upload.
+  * Documented informations in ‘debian/upstream-metadata.yaml’.
+  * Removed mention of the bibliographic reference in ‘debian/control’.
+  * Updated homepage (debian/control).
+
+ -- Charles Plessy <plessy at debian.org>  Sun, 03 Jan 2010 23:32:58 +0900
+
 alien-hunter (1.7-1) unstable; urgency=low
 
   * Initial release (Closes: #550954)

Modified: trunk/packages/alien-hunter/trunk/debian/control
===================================================================
--- trunk/packages/alien-hunter/trunk/debian/control	2010-01-03 14:30:01 UTC (rev 4505)
+++ trunk/packages/alien-hunter/trunk/debian/control	2010-01-03 14:37:51 UTC (rev 4506)
@@ -6,7 +6,7 @@
 Uploaders: Andreas Tille <tille at debian.org>
 Build-Depends: debhelper (>= 7.1), libbiojava-java, default-jdk, quilt
 Standards-Version: 3.8.3
-Homepage: http://www.sanger.ac.uk/Software/analysis/alien_hunter/
+Homepage: http://www.sanger.ac.uk/resources/software/alien_hunter.html
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/alien-hunter/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/alien-hunter/trunk/
 
@@ -27,10 +27,3 @@
  predicted regions. The predictions (embl format) can be automatically
  loaded into Artemis genome viewer freely available at:
  http://www.sanger.ac.uk/Software/Artemis/.
- .
- The manuscript describing the alien_hunter algorithm is available
- from Bioinformatics: Interpolated variable order motifs for
- identification of horizontally acquired DNA: revisiting the
- Salmonella pathogenicity islands.  Vernikos GS, Parkhill J
- Bioinformatics. 2006;. PMID: 16837528
-

Added: trunk/packages/alien-hunter/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/alien-hunter/trunk/debian/upstream-metadata.yaml	                        (rev 0)
+++ trunk/packages/alien-hunter/trunk/debian/upstream-metadata.yaml	2010-01-03 14:37:51 UTC (rev 4506)
@@ -0,0 +1,17 @@
+Contact   : George Vernikos <gsv at sanger.ac.uk>
+DOI: 10.1093/bioinformatics/btl369
+Homepage: http://www.sanger.ac.uk/resources/software/alien_hunter.html
+Name: Alien_hunter
+PMID: 16837528
+Reference:
+ author: Vernikos, Georgios S. and Parkhill, Julian
+ title: Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands
+ journal: Bioinformatics
+ volume: 22
+ number: 18
+ pages: 2196-2203
+ doi: 10.1093/bioinformatics/btl369
+ year: 2006
+ URL: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/18/2196
+ eprint: http://bioinformatics.oxfordjournals.org/cgi/reprint/22/18/2196.pdf
+Watch: http://www.sanger.ac.uk/Software/analysis/alien_hunter/alien_hunter-([.\d]+)\.tar\.gz