[med-svn] r4953 - in trunk/packages: . python-cogent/trunk/debian python-pynast/trunk/debian

[Steffen Möller]

Author: moeller
Date: 2010-06-27 23:09:00 +0000 (Sun, 27 Jun 2010)
New Revision: 4953

Added:
   trunk/packages/python-pynast/
   trunk/packages/python-pynast/trunk/debian/rules
Removed:
   trunk/packages/python-pynast/trunk/debian/README.source
   trunk/packages/python-pynast/trunk/debian/rules
Modified:
   trunk/packages/python-cogent/trunk/debian/control
   trunk/packages/python-cogent/trunk/debian/rules
   trunk/packages/python-pynast/trunk/debian/changelog
   trunk/packages/python-pynast/trunk/debian/control
Log:
Cleanup and rename.


Modified: trunk/packages/python-cogent/trunk/debian/control
===================================================================
--- trunk/packages/python-cogent/trunk/debian/control	2010-06-27 23:07:10 UTC (rev 4952)
+++ trunk/packages/python-cogent/trunk/debian/control	2010-06-27 23:09:00 UTC (rev 4953)
@@ -2,14 +2,16 @@
 Section: python
 Priority: extra
 Maintainer: Sri Girish Srinivasa Murthy <srigirish at evolbio.mpg.de>
-Build-Depends: debhelper (>= 7), cdbs, python, python-support, python-numpy (>= 1.3.0)
+Build-Depends: debhelper (>= 7), cdbs, python, python-central, python-numpy (>= 1.3.0)
 Standards-Version: 3.8.4
 Homepage: http://pycogent.sourceforge.net/
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/python-cogent/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/python-cogent/trunk/
+XS-Python-Version: >= 2.5
 
 Package: python-cogent
 Architecture: any
+XB-Python-Version:  ${python:Versions}
 Depends: ${shlibs:Depends}, ${misc:Depends}, ${misc:Depends}, ${python:Depends}
 Description: framework for genomic biology
  PyCogent is a software library for genomic biology. It is a fully

Modified: trunk/packages/python-cogent/trunk/debian/rules
===================================================================
--- trunk/packages/python-cogent/trunk/debian/rules	2010-06-27 23:07:10 UTC (rev 4952)
+++ trunk/packages/python-cogent/trunk/debian/rules	2010-06-27 23:09:00 UTC (rev 4953)
@@ -4,13 +4,10 @@
 # Uncomment this to turn on verbose mode.
 #export DH_VERBOSE=1
 
-export DEB_PYTHON_SYSTEM=pysupport
+export DEB_PYTHON_SYSTEM=pycentral
 
 include /usr/share/cdbs/1/rules/debhelper.mk
 include /usr/share/cdbs/1/class/python-distutils.mk
 
-#install::
-#	dh_link usr/lib/python$(cdbs_python_build_versions)/site-packages/cogent usr/lib/python$(cdbs_python_build_versions)
-
 clean::
 	rm -rf build build-stamp

Deleted: trunk/packages/python-pynast/trunk/debian/README.source
===================================================================
--- trunk/packages/python-nast/trunk/debian/README.source	2010-06-26 23:29:28 UTC (rev 4949)
+++ trunk/packages/python-pynast/trunk/debian/README.source	2010-06-27 23:09:00 UTC (rev 4953)
@@ -1,2 +0,0 @@
-python-nast for Debian
-----------------------

Modified: trunk/packages/python-pynast/trunk/debian/changelog
===================================================================
--- trunk/packages/python-nast/trunk/debian/changelog	2010-06-26 23:29:28 UTC (rev 4949)
+++ trunk/packages/python-pynast/trunk/debian/changelog	2010-06-27 23:09:00 UTC (rev 4953)
@@ -1,4 +1,4 @@
-python-nast (1.1-1) unstable; urgency=low
+python-pynast (1.1-1) unstable; urgency=low
 
   * Initial release (Closes: #587189)
 

Modified: trunk/packages/python-pynast/trunk/debian/control
===================================================================
--- trunk/packages/python-nast/trunk/debian/control	2010-06-26 23:29:28 UTC (rev 4949)
+++ trunk/packages/python-pynast/trunk/debian/control	2010-06-27 23:09:00 UTC (rev 4953)
@@ -1,17 +1,19 @@
-Source: python-nast
+Source: python-pynast
 Section: python
 Priority: extra
 Maintainer: Sri Girish Srinivasa Murthy <srigirish at evolbio.mpg.de>
 Uploaders: Steffen Moeller <moeller at debian.org>
-Build-Depends: debhelper (>= 7), cdbs, python, python-central, python-cogent
+Build-Depends: debhelper (>= 7), cdbs, python (>= 2.5), python-central, python-cogent
 Standards-Version: 3.8.4
 Homepage: http://pynast.sourceforge.net/
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/python-nast/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/python-nast/trunk/
+XS-Python-Version: >= 2.5
 
-Package: python-nast
-Architecture: any
+Package: python-pynast
+Architecture: all
 Depends: ${shlibs:Depends}, ${misc:Depends}, ${misc:Depends}, ${python:Depends}
+XB-Python-Version: ${python:Versions}
 Description: alignment of short DNA sequences
  The package provices a reimplementation of the Nearest Alignment 
  Space Termination tool in python. It was prepared for next generation

Deleted: trunk/packages/python-pynast/trunk/debian/rules
===================================================================
--- trunk/packages/python-nast/trunk/debian/rules	2010-06-26 23:29:28 UTC (rev 4949)
+++ trunk/packages/python-pynast/trunk/debian/rules	2010-06-27 23:09:00 UTC (rev 4953)
@@ -1,19 +0,0 @@
-#!/usr/bin/make -f
-# -*- makefile -*-
-
-# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
-
-export DEB_PYTHON_SYSTEM=pycentral
-
-include /usr/share/cdbs/1/rules/debhelper.mk
-include /usr/share/cdbs/1/class/python-distutils.mk
-#include /usr/share/cdbs/1/rules/patchsys-quilt.mk
-
-install::
-	find . -name runAdt | xargs -r chmod +x 
-
-clean::
-	find . -name CVS -a -type d | xargs -r rm -r
-	find . -name runAdt | xargs -r chmod +x 
-	rm -rf build build-stamp

Copied: trunk/packages/python-pynast/trunk/debian/rules (from rev 4951, trunk/packages/python-nast/trunk/debian/rules)
===================================================================
--- trunk/packages/python-pynast/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/python-pynast/trunk/debian/rules	2010-06-27 23:09:00 UTC (rev 4953)
@@ -0,0 +1,12 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+export DEB_PYTHON_SYSTEM=pycentral
+include /usr/share/cdbs/1/rules/debhelper.mk
+include /usr/share/cdbs/1/class/python-distutils.mk
+
+clean::
+	rm -rf build build-stamp