[med-svn] r5507 - in trunk/packages: . bowtie bowtie/trunk bowtie/trunk/debian bowtie/trunk/debian/source

Steffen Möller moeller at alioth.debian.org
Thu Nov 25 16:23:38 UTC 2010 

Author: moeller
Date: 2010-11-25 16:23:36 +0000 (Thu, 25 Nov 2010)
New Revision: 5507

Added:
   trunk/packages/bowtie/
   trunk/packages/bowtie/trunk/
   trunk/packages/bowtie/trunk/debian/
   trunk/packages/bowtie/trunk/debian/README.Debian
   trunk/packages/bowtie/trunk/debian/README.source
   trunk/packages/bowtie/trunk/debian/bowtie.doc-base.EX
   trunk/packages/bowtie/trunk/debian/bowtie.install
   trunk/packages/bowtie/trunk/debian/changelog
   trunk/packages/bowtie/trunk/debian/compat
   trunk/packages/bowtie/trunk/debian/control
   trunk/packages/bowtie/trunk/debian/copyright
   trunk/packages/bowtie/trunk/debian/docs
   trunk/packages/bowtie/trunk/debian/rules
   trunk/packages/bowtie/trunk/debian/source/
   trunk/packages/bowtie/trunk/debian/source/format
   trunk/packages/bowtie/trunk/debian/watch
Log:
Seed of a packaging of NGS tool bowtie.


Added: trunk/packages/bowtie/trunk/debian/README.Debian
===================================================================
--- trunk/packages/bowtie/trunk/debian/README.Debian	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/README.Debian	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,6 @@
+bowtie for Debian
+-----------------
+
+<possible notes regarding this package - if none, delete this file>
+
+ -- Steffen Moeller <moeller at debian.org>  Thu, 25 Nov 2010 17:04:39 +0100

Added: trunk/packages/bowtie/trunk/debian/README.source
===================================================================
--- trunk/packages/bowtie/trunk/debian/README.source	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/README.source	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,9 @@
+bowtie for Debian
+-----------------
+
+<this file describes information about the source package, see Debian policy
+manual section 4.14. You WILL either need to modify or delete this file>
+
+
+
+

Added: trunk/packages/bowtie/trunk/debian/bowtie.doc-base.EX
===================================================================
--- trunk/packages/bowtie/trunk/debian/bowtie.doc-base.EX	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/bowtie.doc-base.EX	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,20 @@
+Document: bowtie
+Title: Debian bowtie Manual
+Author: <insert document author here>
+Abstract: This manual describes what bowtie is
+ and how it can be used to
+ manage online manuals on Debian systems.
+Section: unknown
+
+Format: debiandoc-sgml
+Files: /usr/share/doc/bowtie/bowtie.sgml.gz
+
+Format: postscript
+Files: /usr/share/doc/bowtie/bowtie.ps.gz
+
+Format: text
+Files: /usr/share/doc/bowtie/bowtie.text.gz
+
+Format: HTML
+Index: /usr/share/doc/bowtie/html/index.html
+Files: /usr/share/doc/bowtie/html/*.html

Added: trunk/packages/bowtie/trunk/debian/bowtie.install
===================================================================
--- trunk/packages/bowtie/trunk/debian/bowtie.install	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/bowtie.install	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,3 @@
+./bowtie	usr/bin
+./bowtie-build	usr/bin
+./bowtie-inspect usr/bin

Added: trunk/packages/bowtie/trunk/debian/changelog
===================================================================
--- trunk/packages/bowtie/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/changelog	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,5 @@
+bowtie (0.12.7-1) unstable; urgency=low
+
+  * Initial release (Closes: #nnnn)  <nnnn is the bug number of your ITP>
+
+ -- Steffen Moeller <moeller at debian.org>  Thu, 25 Nov 2010 17:04:39 +0100

Added: trunk/packages/bowtie/trunk/debian/compat
===================================================================
--- trunk/packages/bowtie/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/compat	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1 @@
+7

Added: trunk/packages/bowtie/trunk/debian/control
===================================================================
--- trunk/packages/bowtie/trunk/debian/control	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/control	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,15 @@
+Source: bowtie
+Section: unknown
+Priority: extra
+Maintainer: Steffen Moeller <moeller at debian.org>
+Build-Depends: debhelper (>= 7.0.50~)
+Standards-Version: 3.8.4
+Homepage: <insert the upstream URL, if relevant>
+#Vcs-Git: git://git.debian.org/collab-maint/bowtie.git
+#Vcs-Browser: http://git.debian.org/?p=collab-maint/bowtie.git;a=summary
+
+Package: bowtie
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: <insert up to 60 chars description>
+ <insert long description, indented with spaces>

Added: trunk/packages/bowtie/trunk/debian/copyright
===================================================================
--- trunk/packages/bowtie/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/copyright	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,45 @@
+This work was packaged for Debian by:
+
+    Steffen Moeller <moeller at debian.org> on Thu, 25 Nov 2010 17:04:39 +0100
+
+It was downloaded from:
+
+    <url://example.com>
+
+Upstream Author(s):
+
+    <put author's name and email here>
+    <likewise for another author>
+
+Copyright:
+
+    <Copyright (C) YYYY Firstname Lastname>
+    <likewise for another author>
+
+License:
+
+    This program is free software; you can redistribute it and/or modify it
+    under the terms of the "Artistic License" which comes with Debian.
+
+    THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
+    WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
+    OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.
+
+On Debian systems, the complete text of the Artistic License
+can be found in "/usr/share/common-licenses/Artistic".
+
+The Debian packaging is:
+
+    Copyright (C) 2010 Steffen Moeller <moeller at debian.org>
+
+# Please chose a license for your packaging work. If the program you package
+# uses a mainstream license, using the same license is the safest choice.
+# Please avoid to pick license terms that are more restrictive than the
+# packaged work, as it may make Debian's contributions unacceptable upstream.
+# If you just want it to be GPL version 3, leave the following lines in.
+
+and is licensed under the GPL version 3,
+see "/usr/share/common-licenses/GPL-3".
+
+# Please also look if there are files or directories which have a
+# different copyright/license attached and list them here.

Added: trunk/packages/bowtie/trunk/debian/docs
===================================================================
--- trunk/packages/bowtie/trunk/debian/docs	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/docs	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1 @@
+NEWS

Added: trunk/packages/bowtie/trunk/debian/rules
===================================================================
--- trunk/packages/bowtie/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/rules	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,16 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# As a special exception, when this file is copied by dh-make into a
+# dh-make output file, you may use that output file without restriction.
+# This special exception was added by Craig Small in version 0.37 of dh-make.
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+%:
+	dh $@ 
+
+bowtie/build:
+	$(MAKE) allall


Property changes on: trunk/packages/bowtie/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/bowtie/trunk/debian/source/format
===================================================================
--- trunk/packages/bowtie/trunk/debian/source/format	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/source/format	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1 @@
+3.0 (quilt)

Added: trunk/packages/bowtie/trunk/debian/watch
===================================================================
--- trunk/packages/bowtie/trunk/debian/watch	                        (rev 0)
+++ trunk/packages/bowtie/trunk/debian/watch	2010-11-25 16:23:36 UTC (rev 5507)
@@ -0,0 +1,2 @@
+version=3
+http://sf.net/bowtie-bio/bowtie-(.*)\.zip

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